PDB Short entry for 2P79 HEADER HYDROLASE 20-MAR-07 2P79 TITLE CRYSTAL STRUCTURE OF TTHB049 FROM THERMUS THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-RIBAZOLE-5'-PHOSPHATE PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TTHB049 PROTEIN; COMPND 5 EC: 3.1.3.73; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS THERMUS THERMOPHILUS HB8, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SUGAHARA,M.TAKETA,Y.KAGEYAMA,Y.MATSUURA,N.KUNISHIMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 5 25-OCT-23 2P79 1 REMARK REVDAT 4 10-NOV-21 2P79 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2P79 1 VERSN REVDAT 2 24-FEB-09 2P79 1 VERSN REVDAT 1 25-SEP-07 2P79 0 JRNL AUTH M.SUGAHARA,M.TAKETA,Y.KAGEYAMA,Y.MATSUURA,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF TTHB049 FROM THERMUS THERMOPHILUS HB8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44086 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2187 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 223 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2694 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 362 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.91000 REMARK 3 B22 (A**2) : -1.38000 REMARK 3 B33 (A**2) : 0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.12 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 1.400 REMARK 3 BOND ANGLES (DEGREES) : 0.007 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2P79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44097 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : 0.34100 REMARK 200 R SYM FOR SHELL (I) : 0.32400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1V37 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.75M NACL, 0.1M TRIS-HCL, PH 8.3, OIL REMARK 280 -MICRO BATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.47400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.94300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.48350 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.47400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.94300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.48350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.47400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.94300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.48350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.47400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.94300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.48350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER IN THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 172 REMARK 465 GLU A 173 REMARK 465 GLU A 174 REMARK 465 ALA A 175 REMARK 465 THR A 176 REMARK 465 GLY A 177 REMARK 465 ASP B 171 REMARK 465 GLY B 172 REMARK 465 GLU B 173 REMARK 465 GLU B 174 REMARK 465 ALA B 175 REMARK 465 THR B 176 REMARK 465 GLY B 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2037 O HOH B 2096 4555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 160 NE1 TRP A 160 CE2 0.114 REMARK 500 TRP B 160 NE1 TRP B 160 CE2 0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 132 -150.11 -145.11 REMARK 500 PRO A 161 50.30 -103.67 REMARK 500 ALA B 41 -40.27 -136.36 REMARK 500 THR B 132 -147.66 -145.78 REMARK 500 PRO B 161 42.87 -106.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B2001 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 79 O REMARK 620 2 GLU A 81 O 119.3 REMARK 620 3 ALA B 79 O 121.1 96.5 REMARK 620 4 GLU B 81 O 95.6 112.5 112.7 REMARK 620 5 HOH B2148 O 67.6 85.4 71.0 160.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2P6M RELATED DB: PDB REMARK 900 RELATED ID: 2P6O RELATED DB: PDB REMARK 900 RELATED ID: 2P75 RELATED DB: PDB REMARK 900 RELATED ID: 2P77 RELATED DB: PDB REMARK 900 RELATED ID: 2P78 RELATED DB: PDB REMARK 900 RELATED ID: TTK003000215.14 RELATED DB: TARGETDB DBREF 2P79 A 1 177 UNP Q53WB3 Q53WB3_THET8 1 177 DBREF 2P79 B 1 177 UNP Q53WB3 Q53WB3_THET8 1 177 SEQADV 2P79 MET A 84 UNP Q53WB3 LEU 84 ENGINEERED MUTATION SEQADV 2P79 MET B 84 UNP Q53WB3 LEU 84 ENGINEERED MUTATION SEQRES 1 A 177 MET GLU LEU TRP LEU VAL ARG HIS GLY GLU THR LEU TRP SEQRES 2 A 177 ASN ARG GLU GLY ARG LEU LEU GLY TRP THR ASP LEU PRO SEQRES 3 A 177 LEU THR ALA GLU GLY GLU ALA GLN ALA ARG ARG LEU LYS SEQRES 4 A 177 GLY ALA LEU PRO SER LEU PRO ALA PHE SER SER ASP LEU SEQRES 5 A 177 LEU ARG ALA ARG ARG THR ALA GLU LEU ALA GLY PHE SER SEQRES 6 A 177 PRO ARG LEU TYR PRO GLU LEU ARG GLU ILE HIS PHE GLY SEQRES 7 A 177 ALA LEU GLU GLY ALA MET TRP GLU THR LEU ASP PRO ARG SEQRES 8 A 177 TYR LYS GLU ALA LEU LEU ARG PHE GLN GLY PHE HIS PRO SEQRES 9 A 177 PRO GLY GLY GLU SER LEU SER ALA PHE GLN GLU ARG VAL SEQRES 10 A 177 PHE ARG PHE LEU GLU GLY LEU LYS ALA PRO ALA VAL LEU SEQRES 11 A 177 PHE THR HIS GLY GLY VAL VAL ARG ALA VAL LEU ARG ALA SEQRES 12 A 177 LEU GLY GLU ASP GLY LEU VAL PRO PRO GLY SER ALA VAL SEQRES 13 A 177 ALA VAL ASP TRP PRO ARG ARG VAL LEU VAL ARG LEU ALA SEQRES 14 A 177 LEU ASP GLY GLU GLU ALA THR GLY SEQRES 1 B 177 MET GLU LEU TRP LEU VAL ARG HIS GLY GLU THR LEU TRP SEQRES 2 B 177 ASN ARG GLU GLY ARG LEU LEU GLY TRP THR ASP LEU PRO SEQRES 3 B 177 LEU THR ALA GLU GLY GLU ALA GLN ALA ARG ARG LEU LYS SEQRES 4 B 177 GLY ALA LEU PRO SER LEU PRO ALA PHE SER SER ASP LEU SEQRES 5 B 177 LEU ARG ALA ARG ARG THR ALA GLU LEU ALA GLY PHE SER SEQRES 6 B 177 PRO ARG LEU TYR PRO GLU LEU ARG GLU ILE HIS PHE GLY SEQRES 7 B 177 ALA LEU GLU GLY ALA MET TRP GLU THR LEU ASP PRO ARG SEQRES 8 B 177 TYR LYS GLU ALA LEU LEU ARG PHE GLN GLY PHE HIS PRO SEQRES 9 B 177 PRO GLY GLY GLU SER LEU SER ALA PHE GLN GLU ARG VAL SEQRES 10 B 177 PHE ARG PHE LEU GLU GLY LEU LYS ALA PRO ALA VAL LEU SEQRES 11 B 177 PHE THR HIS GLY GLY VAL VAL ARG ALA VAL LEU ARG ALA SEQRES 12 B 177 LEU GLY GLU ASP GLY LEU VAL PRO PRO GLY SER ALA VAL SEQRES 13 B 177 ALA VAL ASP TRP PRO ARG ARG VAL LEU VAL ARG LEU ALA SEQRES 14 B 177 LEU ASP GLY GLU GLU ALA THR GLY HET GOL A1001 6 HET GOL A1003 6 HET GOL A1004 6 HET NA B2001 1 HET GOL B1002 6 HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 6 NA NA 1+ FORMUL 8 HOH *362(H2 O) HELIX 1 1 THR A 11 GLY A 17 1 7 HELIX 2 2 THR A 28 LYS A 39 1 12 HELIX 3 3 LEU A 52 ALA A 62 1 11 HELIX 4 4 PRO A 70 ARG A 73 5 4 HELIX 5 5 PHE A 77 GLU A 81 5 5 HELIX 6 6 MET A 84 LEU A 88 5 5 HELIX 7 7 ASP A 89 ARG A 98 1 10 HELIX 8 8 SER A 109 GLY A 123 1 15 HELIX 9 9 HIS A 133 LEU A 144 1 12 HELIX 10 10 THR B 11 GLY B 17 1 7 HELIX 11 11 THR B 28 LYS B 39 1 12 HELIX 12 12 LEU B 52 ALA B 62 1 11 HELIX 13 13 PRO B 70 ARG B 73 5 4 HELIX 14 14 PHE B 77 GLU B 81 5 5 HELIX 15 15 MET B 84 LEU B 88 5 5 HELIX 16 16 ASP B 89 PHE B 99 1 11 HELIX 17 17 SER B 109 LEU B 124 1 16 HELIX 18 18 HIS B 133 LEU B 144 1 12 SHEET 1 A 6 ARG A 67 LEU A 68 0 SHEET 2 A 6 ALA A 47 SER A 49 1 N ALA A 47 O ARG A 67 SHEET 3 A 6 ALA A 128 THR A 132 1 O PHE A 131 N PHE A 48 SHEET 4 A 6 GLU A 2 ARG A 7 1 N TRP A 4 O LEU A 130 SHEET 5 A 6 ALA A 155 ASP A 159 -1 O VAL A 156 N LEU A 5 SHEET 6 A 6 ARG A 163 LEU A 168 -1 O ARG A 163 N ASP A 159 SHEET 1 B 6 ARG B 67 LEU B 68 0 SHEET 2 B 6 ALA B 47 SER B 49 1 N SER B 49 O ARG B 67 SHEET 3 B 6 ALA B 128 THR B 132 1 O PHE B 131 N PHE B 48 SHEET 4 B 6 GLU B 2 ARG B 7 1 N TRP B 4 O LEU B 130 SHEET 5 B 6 ALA B 155 ASP B 159 -1 O VAL B 156 N LEU B 5 SHEET 6 B 6 ARG B 163 LEU B 168 -1 O ARG B 163 N ASP B 159 LINK O ALA A 79 NA NA B2001 8555 1555 2.38 LINK O GLU A 81 NA NA B2001 8555 1555 2.35 LINK O ALA B 79 NA NA B2001 1555 1555 2.30 LINK O GLU B 81 NA NA B2001 1555 1555 2.35 LINK NA NA B2001 O HOH B2148 1555 1555 2.66 CISPEP 1 TRP A 160 PRO A 161 0 -3.43 CISPEP 2 TRP B 160 PRO B 161 0 -0.54 SITE 1 AC1 5 ALA A 79 GLU A 81 ALA B 79 GLU B 81 SITE 2 AC1 5 HOH B2148 SITE 1 AC2 3 TYR A 69 PHE A 120 GLY A 123 SITE 1 AC3 5 PHE B 48 PHE B 120 GLY B 123 LEU B 124 SITE 2 AC3 5 HOH B2014 SITE 1 AC4 4 GLY A 101 SER A 111 HOH A1100 SER B 65 SITE 1 AC5 4 GLU A 74 GLY A 135 ARG A 138 HOH A1113 CRYST1 84.948 91.886 110.967 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011772 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010883 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009012 0.00000