PDB Short entry for 2PBX HEADER TRANSCRIPTION 29-MAR-07 2PBX TITLE VIBRIO CHOLERAE HAPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ/PROTEASE REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 412614; SOURCE 4 STRAIN: 2740-80; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PTXB1 KEYWDS QUORUM SENSING, VIBRIO CHOLERAE, TRANSCRIPTION FACTOR, TETR FAMILY, KEYWDS 2 DNA-BINDING, PROTEASE, TRANSCRIPTION REGULATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR F.J.KULL,R.S.DESILVA,G.KOVACIKOVA,W.LIN,R.K.TAYLOR,K.SKORUPSKI REVDAT 3 13-JUL-11 2PBX 1 VERSN REVDAT 2 24-FEB-09 2PBX 1 VERSN REVDAT 1 02-OCT-07 2PBX 0 JRNL AUTH R.S.DESILVA,G.KOVACIKOVA,W.LIN,R.K.TAYLOR,K.SKORUPSKI, JRNL AUTH 2 F.J.KULL JRNL TITL CRYSTAL STRUCTURE OF THE VIBRIO CHOLERAE QUORUM-SENSING JRNL TITL 2 REGULATORY PROTEIN HAPR JRNL REF J.BACTERIOL. V. 189 5683 2007 JRNL REFN ISSN 0021-9193 JRNL PMID 17526705 JRNL DOI 10.1128/JB.01807-06 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 19306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2132 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1354 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 180 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3234 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 322 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.92000 REMARK 3 B22 (A**2) : -3.28000 REMARK 3 B33 (A**2) : 0.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.440 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.212 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.480 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3304 ; 0.041 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4465 ; 3.189 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 392 ; 9.466 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 167 ;42.831 ;23.772 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 604 ;23.001 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;25.852 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 498 ; 0.202 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2480 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1917 ; 0.306 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2289 ; 0.339 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 187 ; 0.265 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 113 ; 0.397 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.355 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1963 ; 0.735 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3178 ; 1.000 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1341 ; 2.519 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1287 ; 3.019 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 59 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3183 23.8368 19.0001 REMARK 3 T TENSOR REMARK 3 T11: -0.2252 T22: -0.0835 REMARK 3 T33: -0.2640 T12: -0.1196 REMARK 3 T13: 0.0422 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 14.3239 L22: 14.1800 REMARK 3 L33: 9.4788 L12: 9.4984 REMARK 3 L13: 5.4760 L23: 7.3474 REMARK 3 S TENSOR REMARK 3 S11: -0.8763 S12: 0.4564 S13: -0.6614 REMARK 3 S21: -1.4291 S22: 0.8302 S23: -0.7630 REMARK 3 S31: -0.7612 S32: 0.8569 S33: 0.0461 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9217 32.3794 44.2525 REMARK 3 T TENSOR REMARK 3 T11: -0.3194 T22: -0.2178 REMARK 3 T33: -0.1963 T12: -0.0141 REMARK 3 T13: 0.0206 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 2.7980 L22: 4.0358 REMARK 3 L33: 6.2548 L12: 0.1455 REMARK 3 L13: 1.5771 L23: 2.6059 REMARK 3 S TENSOR REMARK 3 S11: -0.0710 S12: -0.0184 S13: 0.1176 REMARK 3 S21: 0.4299 S22: -0.1707 S23: 0.3307 REMARK 3 S31: -0.1019 S32: -0.5806 S33: 0.2417 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 59 REMARK 3 ORIGIN FOR THE GROUP (A): 36.9897 59.9656 19.8877 REMARK 3 T TENSOR REMARK 3 T11: -0.3537 T22: -0.0971 REMARK 3 T33: -0.2655 T12: -0.0181 REMARK 3 T13: 0.0435 T23: 0.0758 REMARK 3 L TENSOR REMARK 3 L11: 6.3268 L22: 8.5583 REMARK 3 L33: 9.5816 L12: -0.2283 REMARK 3 L13: -2.5278 L23: -3.2547 REMARK 3 S TENSOR REMARK 3 S11: -0.1655 S12: 0.4030 S13: 0.1152 REMARK 3 S21: -0.4632 S22: 0.2045 S23: -0.0464 REMARK 3 S31: 0.9281 S32: -0.6072 S33: -0.0390 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 60 B 201 REMARK 3 ORIGIN FOR THE GROUP (A): 37.4868 50.6217 45.5382 REMARK 3 T TENSOR REMARK 3 T11: -0.2369 T22: -0.2942 REMARK 3 T33: -0.1580 T12: -0.0039 REMARK 3 T13: 0.0568 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 1.0635 L22: 4.1804 REMARK 3 L33: 6.6797 L12: -0.1086 REMARK 3 L13: 0.1856 L23: -2.8637 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: 0.0328 S13: 0.0236 REMARK 3 S21: 0.3818 S22: -0.0270 S23: -0.1432 REMARK 3 S31: 0.0644 S32: 0.0928 S33: 0.0575 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB042207. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-05; NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0; NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X6A; X6A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0093; 0.9392, 1.0059 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR; NULL REMARK 200 OPTICS : TOROIDAL FOCUSING MIRROR; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 67.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.06000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.20600 REMARK 200 R SYM FOR SHELL (I) : 0.30800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIPAS REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M HEPES PH 7.5, 12% (WT/VOL) REMARK 280 POLYETHYLENE GLYCOL 8000, AND 5% (VOL/VOL) ETHYLENE GLYCOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.89250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.19250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.54250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.19250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.89250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.54250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 LYS A 202 REMARK 465 ASN A 203 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 LYS B 202 REMARK 465 ASN B 203 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 201 O REMARK 470 TYR B 201 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 37 39.72 -73.11 REMARK 500 THR A 60 -169.55 -125.66 REMARK 500 LEU A 86 -5.79 -59.99 REMARK 500 ALA A 120 32.60 -95.97 REMARK 500 GLU A 125 43.88 -92.66 REMARK 500 VAL A 126 -63.09 -141.91 REMARK 500 ARG A 151 -6.15 -59.66 REMARK 500 GLU A 153 -32.38 167.66 REMARK 500 ARG A 180 -70.74 -103.15 REMARK 500 CYS A 199 -121.19 -130.65 REMARK 500 ILE A 200 48.94 38.12 REMARK 500 ARG B 37 43.46 -87.04 REMARK 500 VAL B 49 -169.74 -124.23 REMARK 500 VAL B 126 -65.34 -135.53 REMARK 500 GLU B 156 -3.95 -58.63 REMARK 500 VAL B 178 -5.47 -51.34 REMARK 500 LEU B 181 -66.30 -98.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 212 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH A 224 DISTANCE = 5.79 ANGSTROMS REMARK 525 HOH A 263 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH A 280 DISTANCE = 5.40 ANGSTROMS REMARK 525 HOH A 281 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH A 291 DISTANCE = 5.58 ANGSTROMS REMARK 525 HOH A 329 DISTANCE = 5.50 ANGSTROMS REMARK 525 HOH A 336 DISTANCE = 5.50 ANGSTROMS REMARK 525 HOH A 348 DISTANCE = 5.24 ANGSTROMS REMARK 525 HOH A 356 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH B 224 DISTANCE = 5.77 ANGSTROMS REMARK 525 HOH B 236 DISTANCE = 5.66 ANGSTROMS REMARK 525 HOH B 248 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH B 257 DISTANCE = 5.46 ANGSTROMS REMARK 525 HOH B 263 DISTANCE = 5.57 ANGSTROMS REMARK 525 HOH B 277 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH B 317 DISTANCE = 5.52 ANGSTROMS REMARK 525 HOH B 348 DISTANCE = 5.63 ANGSTROMS REMARK 525 HOH B 361 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH B 365 DISTANCE = 5.85 ANGSTROMS DBREF 2PBX A 1 203 UNP A1F928 A1F928_VIBCH 1 203 DBREF 2PBX B 1 203 UNP A1F928 A1F928_VIBCH 1 203 SEQRES 1 A 203 MET ASP ALA SER ILE GLU LYS ARG PRO ARG THR ARG LEU SEQRES 2 A 203 SER PRO GLN LYS ARG LYS LEU GLN LEU MET GLU ILE ALA SEQRES 3 A 203 LEU GLU VAL PHE ALA LYS ARG GLY ILE GLY ARG GLY GLY SEQRES 4 A 203 HIS ALA ASP ILE ALA GLU ILE ALA GLN VAL SER VAL ALA SEQRES 5 A 203 THR VAL PHE ASN TYR PHE PRO THR ARG GLU ASP LEU VAL SEQRES 6 A 203 ASP ASP VAL LEU ASN PHE VAL VAL ARG GLN TYR SER ASN SEQRES 7 A 203 PHE LEU THR ASP HIS ILE ASP LEU ASP LEU ASP VAL LYS SEQRES 8 A 203 THR ASN LEU GLN THR LEU CYS LYS GLU MET VAL LYS LEU SEQRES 9 A 203 ALA MET THR ASP CYS HIS TRP LEU LYS VAL TRP PHE GLU SEQRES 10 A 203 TRP SER ALA SER THR ARG ASP GLU VAL TRP PRO LEU PHE SEQRES 11 A 203 VAL SER THR ASN ARG THR ASN GLN LEU LEU ILE ARG ASN SEQRES 12 A 203 MET PHE MET LYS ALA MET GLU ARG GLY GLU LEU CYS GLU SEQRES 13 A 203 LYS HIS ASP VAL ASP ASN MET ALA SER LEU PHE HIS GLY SEQRES 14 A 203 ILE PHE TYR SER ILE PHE LEU GLN VAL ASN ARG LEU GLY SEQRES 15 A 203 GLU GLN GLU ALA VAL TYR LYS LEU ALA ASP SER TYR LEU SEQRES 16 A 203 ASN MET LEU CYS ILE TYR LYS ASN SEQRES 1 B 203 MET ASP ALA SER ILE GLU LYS ARG PRO ARG THR ARG LEU SEQRES 2 B 203 SER PRO GLN LYS ARG LYS LEU GLN LEU MET GLU ILE ALA SEQRES 3 B 203 LEU GLU VAL PHE ALA LYS ARG GLY ILE GLY ARG GLY GLY SEQRES 4 B 203 HIS ALA ASP ILE ALA GLU ILE ALA GLN VAL SER VAL ALA SEQRES 5 B 203 THR VAL PHE ASN TYR PHE PRO THR ARG GLU ASP LEU VAL SEQRES 6 B 203 ASP ASP VAL LEU ASN PHE VAL VAL ARG GLN TYR SER ASN SEQRES 7 B 203 PHE LEU THR ASP HIS ILE ASP LEU ASP LEU ASP VAL LYS SEQRES 8 B 203 THR ASN LEU GLN THR LEU CYS LYS GLU MET VAL LYS LEU SEQRES 9 B 203 ALA MET THR ASP CYS HIS TRP LEU LYS VAL TRP PHE GLU SEQRES 10 B 203 TRP SER ALA SER THR ARG ASP GLU VAL TRP PRO LEU PHE SEQRES 11 B 203 VAL SER THR ASN ARG THR ASN GLN LEU LEU ILE ARG ASN SEQRES 12 B 203 MET PHE MET LYS ALA MET GLU ARG GLY GLU LEU CYS GLU SEQRES 13 B 203 LYS HIS ASP VAL ASP ASN MET ALA SER LEU PHE HIS GLY SEQRES 14 B 203 ILE PHE TYR SER ILE PHE LEU GLN VAL ASN ARG LEU GLY SEQRES 15 B 203 GLU GLN GLU ALA VAL TYR LYS LEU ALA ASP SER TYR LEU SEQRES 16 B 203 ASN MET LEU CYS ILE TYR LYS ASN FORMUL 3 HOH *322(H2 O) HELIX 1 1 SER A 14 GLY A 34 1 21 HELIX 2 2 GLY A 39 GLN A 48 1 10 HELIX 3 3 SER A 50 PHE A 58 1 9 HELIX 4 4 THR A 60 ILE A 84 1 25 HELIX 5 5 ASP A 89 THR A 107 1 19 HELIX 6 6 CYS A 109 TRP A 118 1 10 HELIX 7 7 VAL A 126 ASN A 134 1 9 HELIX 8 8 ASN A 134 ARG A 151 1 18 HELIX 9 9 ASP A 159 GLY A 182 1 24 HELIX 10 10 GLU A 183 LEU A 198 1 16 HELIX 11 11 SER B 14 GLY B 34 1 21 HELIX 12 12 GLY B 39 GLN B 48 1 10 HELIX 13 13 SER B 50 PHE B 58 1 9 HELIX 14 14 THR B 60 ILE B 84 1 25 HELIX 15 15 ASP B 89 MET B 106 1 18 HELIX 16 16 CYS B 109 ALA B 120 1 12 HELIX 17 17 VAL B 126 ASN B 134 1 9 HELIX 18 18 ASN B 134 ARG B 151 1 18 HELIX 19 19 ASP B 159 LEU B 181 1 23 HELIX 20 20 GLU B 183 MET B 197 1 15 SSBOND 1 CYS A 199 CYS B 199 1555 1555 2.03 CRYST1 43.785 85.085 110.385 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022839 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011753 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009059 0.00000