PDB Short entry for 2PWN HEADER TRANSPORT PROTEIN 11-MAY-07 2PWN TITLE CRYSTAL STRUCTURE OF BET3 HOMOLOG (13277653) FROM MUS MUSCULUS AT 2.04 TITLE 2 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BET3 HOMOLOG; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: 13277653, TRAPPC3, BET3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS 13277653, TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT, BET3, BET3 KEYWDS 2 HOMOLOG, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 25-JAN-23 2PWN 1 REMARK SEQADV LINK REVDAT 4 18-OCT-17 2PWN 1 REMARK REVDAT 3 13-JUL-11 2PWN 1 VERSN REVDAT 2 24-FEB-09 2PWN 1 VERSN REVDAT 1 29-MAY-07 2PWN 0 SPRSDE 29-MAY-07 2PWN 1VPG JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF BET3 HOMOLOG (13277653) FROM MUS JRNL TITL 2 MUSCULUS AT 2.04 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 623 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 878 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1197 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 73 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 38.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.53000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -0.80000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.166 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.162 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.115 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.436 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1266 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1190 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1713 ; 1.381 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2743 ; 0.835 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 164 ; 6.125 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;33.545 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 215 ;13.646 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;15.242 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 200 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1408 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 255 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 239 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1094 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 634 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 766 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 62 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 37 ; 0.150 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.133 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 814 ; 2.132 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 329 ; 0.505 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1276 ; 3.323 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 505 ; 5.267 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 433 ; 7.537 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 173 REMARK 3 ORIGIN FOR THE GROUP (A): 35.8420 39.1240 8.1300 REMARK 3 T TENSOR REMARK 3 T11: -0.1334 T22: -0.0466 REMARK 3 T33: -0.2042 T12: -0.0311 REMARK 3 T13: -0.0099 T23: -0.0522 REMARK 3 L TENSOR REMARK 3 L11: 2.2228 L22: 1.9660 REMARK 3 L33: 2.0594 L12: -0.4671 REMARK 3 L13: -0.1222 L23: -0.3031 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: -0.3128 S13: 0.1681 REMARK 3 S21: 0.2442 S22: 0.0650 S23: -0.1096 REMARK 3 S31: 0.0193 S32: 0.3385 S33: -0.0690 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 3. MYRISTIC ACID MODELED BASED ON RELATED STRUCTURE (1WC9). REMARK 3 4. CYS 68 IS COVALENTLY BOUND TO MYRISTIC ACID. REMARK 3 5. THERE WAS INSUFFICIENT DENSITY TO MODEL RESIDUES 117-120. REMARK 4 REMARK 4 2PWN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042858. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987, 0.97969, 0.97957 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12800 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 23.156 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.68700 REMARK 200 R SYM FOR SHELL (I) : 0.68700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.4M NH4H2PO3, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.86367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.72733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.72733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 18.86367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 ASN A 6 REMARK 465 ARG A 7 REMARK 465 GLY A 8 REMARK 465 THR A 9 REMARK 465 GLU A 10 REMARK 465 SER A 11 REMARK 465 GLU A 117 REMARK 465 LEU A 118 REMARK 465 PRO A 119 REMARK 465 ASP A 120 REMARK 465 ASN A 174 REMARK 465 LEU A 175 REMARK 465 PRO A 176 REMARK 465 ALA A 177 REMARK 465 GLY A 178 REMARK 465 GLU A 179 REMARK 465 GLU A 180 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 LYS A 32 CD CE NZ REMARK 470 GLU A 35 CD OE1 OE2 REMARK 470 GLU A 38 CD OE1 OE2 REMARK 470 LYS A 42 CD CE NZ REMARK 470 ARG A 46 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 84 CE NZ REMARK 470 PHE A 115 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 116 CG1 CG2 REMARK 470 ASN A 121 CG OD1 ND2 REMARK 470 SER A 123 OG REMARK 470 GLN A 143 CD OE1 NE2 REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 ARG A 166 CZ NH1 NH2 REMARK 470 ARG A 169 NE CZ NH1 NH2 REMARK 470 ARG A 170 CD NE CZ NH1 NH2 REMARK 470 ASP A 173 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 68 C1 MYR A 200 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 67 44.41 -99.41 REMARK 500 HIS A 69 36.05 -144.41 REMARK 500 HIS A 69 40.70 -146.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MYR A 200 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYR A 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 354543 RELATED DB: TARGETDB DBREF 2PWN A 1 180 UNP O55013 TPPC3_MOUSE 1 180 SEQADV 2PWN MSE A -11 UNP O55013 EXPRESSION TAG SEQADV 2PWN GLY A -10 UNP O55013 EXPRESSION TAG SEQADV 2PWN SER A -9 UNP O55013 EXPRESSION TAG SEQADV 2PWN ASP A -8 UNP O55013 EXPRESSION TAG SEQADV 2PWN LYS A -7 UNP O55013 EXPRESSION TAG SEQADV 2PWN ILE A -6 UNP O55013 EXPRESSION TAG SEQADV 2PWN HIS A -5 UNP O55013 EXPRESSION TAG SEQADV 2PWN HIS A -4 UNP O55013 EXPRESSION TAG SEQADV 2PWN HIS A -3 UNP O55013 EXPRESSION TAG SEQADV 2PWN HIS A -2 UNP O55013 EXPRESSION TAG SEQADV 2PWN HIS A -1 UNP O55013 EXPRESSION TAG SEQADV 2PWN HIS A 0 UNP O55013 EXPRESSION TAG SEQADV 2PWN MSE A 1 UNP O55013 MET 1 MODIFIED RESIDUE SEQADV 2PWN MSE A 14 UNP O55013 MET 14 MODIFIED RESIDUE SEQADV 2PWN MSE A 47 UNP O55013 MET 47 MODIFIED RESIDUE SEQADV 2PWN MSE A 85 UNP O55013 MET 85 MODIFIED RESIDUE SEQADV 2PWN MSE A 141 UNP O55013 MET 141 MODIFIED RESIDUE SEQADV 2PWN MSE A 144 UNP O55013 MET 144 MODIFIED RESIDUE SEQADV 2PWN MSE A 165 UNP O55013 MET 165 MODIFIED RESIDUE SEQRES 1 A 192 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 192 SER ARG GLN ALA ASN ARG GLY THR GLU SER LYS LYS MSE SEQRES 3 A 192 SER SER GLU LEU PHE THR LEU THR TYR GLY ALA LEU VAL SEQRES 4 A 192 THR GLN LEU CYS LYS ASP TYR GLU ASN ASP GLU ASP VAL SEQRES 5 A 192 ASN LYS GLN LEU ASP ARG MSE GLY TYR ASN ILE GLY VAL SEQRES 6 A 192 ARG LEU ILE GLU ASP PHE LEU ALA ARG SER ASN VAL GLY SEQRES 7 A 192 ARG CYS HIS ASP PHE ARG GLU THR ALA ASP VAL ILE ALA SEQRES 8 A 192 LYS VAL ALA PHE LYS MSE TYR LEU GLY ILE THR PRO SER SEQRES 9 A 192 ILE THR ASN TRP SER PRO ALA GLY ASP GLU PHE SER LEU SEQRES 10 A 192 ILE LEU GLU ASN ASN PRO LEU VAL ASP PHE VAL GLU LEU SEQRES 11 A 192 PRO ASP ASN HIS SER ALA LEU ILE TYR SER ASN LEU LEU SEQRES 12 A 192 CYS GLY VAL LEU ARG GLY ALA LEU GLU MSE VAL GLN MSE SEQRES 13 A 192 ALA VAL GLU ALA LYS PHE VAL GLN ASP THR LEU LYS GLY SEQRES 14 A 192 ASP GLY VAL THR GLU ILE ARG MSE ARG PHE ILE ARG ARG SEQRES 15 A 192 ILE GLU ASP ASN LEU PRO ALA GLY GLU GLU MODRES 2PWN MSE A 14 MET SELENOMETHIONINE MODRES 2PWN MSE A 47 MET SELENOMETHIONINE MODRES 2PWN MSE A 85 MET SELENOMETHIONINE MODRES 2PWN MSE A 141 MET SELENOMETHIONINE MODRES 2PWN MSE A 144 MET SELENOMETHIONINE MODRES 2PWN MSE A 165 MET SELENOMETHIONINE HET MSE A 14 8 HET MSE A 47 8 HET MSE A 85 8 HET MSE A 141 8 HET MSE A 144 8 HET MSE A 165 8 HET MYR A 200 15 HETNAM MSE SELENOMETHIONINE HETNAM MYR MYRISTIC ACID FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 MYR C14 H28 O2 FORMUL 3 HOH *73(H2 O) HELIX 1 1 SER A 16 GLU A 35 1 20 HELIX 2 2 ASN A 36 ARG A 62 1 27 HELIX 3 3 ASP A 70 VAL A 81 1 12 HELIX 4 4 VAL A 81 GLY A 88 1 8 HELIX 5 5 ASN A 129 VAL A 142 1 14 HELIX 6 6 ASP A 153 GLY A 157 5 5 SHEET 1 A 4 SER A 92 THR A 94 0 SHEET 2 A 4 GLU A 102 LEU A 107 -1 O SER A 104 N THR A 94 SHEET 3 A 4 THR A 161 ARG A 170 -1 O THR A 161 N LEU A 107 SHEET 4 A 4 MSE A 144 GLN A 152 -1 N LYS A 149 O ARG A 164 LINK C LYS A 13 N MSE A 14 1555 1555 1.31 LINK C MSE A 14 N SER A 15 1555 1555 1.32 LINK C ARG A 46 N MSE A 47 1555 1555 1.32 LINK C MSE A 47 N GLY A 48 1555 1555 1.33 LINK C LYS A 84 N MSE A 85 1555 1555 1.33 LINK C MSE A 85 N TYR A 86 1555 1555 1.32 LINK C GLU A 140 N MSE A 141 1555 1555 1.33 LINK C MSE A 141 N VAL A 142 1555 1555 1.33 LINK C GLN A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N ALA A 145 1555 1555 1.33 LINK C ARG A 164 N MSE A 165 1555 1555 1.33 LINK C MSE A 165 N ARG A 166 1555 1555 1.33 SITE 1 AC1 6 ILE A 56 CYS A 68 HIS A 69 ASP A 70 SITE 2 AC1 6 GLU A 73 THR A 74 CRYST1 77.533 77.533 56.591 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012900 0.007450 0.000000 0.00000 SCALE2 0.000000 0.014890 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017670 0.00000