PDB Short entry for 2PZX HEADER SIGNALING PROTEIN 18-MAY-07 2PZX TITLE STRUCTURE OF THE METHUSELAH ECTODOMAIN WITH PEPTIDE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: G-PROTEIN COUPLED RECEPTOR MTH; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: N-TERMINAL EXTRACELLULAR DOMAIN; COMPND 5 SYNONYM: PROTEIN METHUSELAH; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: MTH; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469 KEYWDS GPCR G PROTEIN-COUPLED RECEPTOR ECTODOMAIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.P.WEST JR.,W.W.JA,S.L.DELKER,P.J.BJORKMAN,S.BENZER,R.W.ROBERTS REVDAT 4 30-AUG-23 2PZX 1 REMARK REVDAT 3 18-OCT-17 2PZX 1 REMARK REVDAT 2 24-FEB-09 2PZX 1 VERSN REVDAT 1 28-AUG-07 2PZX 0 JRNL AUTH W.W.JA,A.P.WEST,S.L.DELKER,P.J.BJORKMAN,S.BENZER,R.W.ROBERTS JRNL TITL EXTENSION OF DROSOPHILA MELANOGASTER LIFE SPAN WITH A GPCR JRNL TITL 2 PEPTIDE INHIBITOR. JRNL REF NAT.CHEM.BIOL. V. 3 415 2007 JRNL REFN ISSN 1552-4450 JRNL PMID 17546039 JRNL DOI 10.1038/NCHEMBIO.2007.2 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1208292.020 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 16870 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.376 REMARK 3 FREE R VALUE : 0.407 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 822 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2667 REMARK 3 BIN R VALUE (WORKING SET) : 0.4200 REMARK 3 BIN FREE R VALUE : 0.4350 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 137 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.037 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6116 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 20.83000 REMARK 3 B22 (A**2) : 20.83000 REMARK 3 B33 (A**2) : -41.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.69 REMARK 3 ESD FROM SIGMAA (A) : 0.87 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.77 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.71 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.17 REMARK 3 BSOL : 21.58 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE R8-01 15-MER PEPTIDE (FPSSWLQRYYLAKRR) WAS NOT INCLUDED IN THE REMARK 3 MODEL. REMARK 3 THIS CRYSTAL HAS A STACKING FAULT-TYPE DISORDER, WHICH CAN ONLY BE REMARK 3 PARTIALLY MODELED. REMARK 3 THE OVERLAPPING NCS-RELATED MOLECULES ARE NECESSARY TO MODEL THE REMARK 3 DISORDER. REMARK 3 REFINEMENT WAS DONE WITH 8 STRICT NCS MATRICES AS FOLLOWS: REMARK 3 REMARK 3 MATRIX_1 = ( 1.000000 0.000000 0.000000 ) REMARK 3 ( 0.000000 1.000000 0.000000 ) REMARK 3 ( 0.000000 0.000000 1.000000 ) REMARK 3 VECTOR_1 = ( 0.0000 0.0000 0.0000 ) REMARK 3 REMARK 3 MATRIX_2 = ( -0.025450 -0.999672 -0.002776 ) REMARK 3 ( -0.999629 0.025476 -0.009636 ) REMARK 3 ( 0.009703 0.002530 -0.999950 ) REMARK 3 VECTOR_2 = ( 95.7336 93.6049 30.5814 ) REMARK 3 REMARK 3 MATRIX_3 = ( 0.999874 -0.015577 -0.003041 ) REMARK 3 ( -0.015587 -0.999874 -0.003124 ) REMARK 3 ( -0.002992 0.003171 -0.999991 ) REMARK 3 VECTOR_3 = ( -46.4752 48.4846 0.7945 ) REMARK 3 REMARK 3 MATRIX_4 = ( -0.030796 -0.999466 -0.010894 ) REMARK 3 ( 0.999470 -0.030907 0.010218 ) REMARK 3 ( -0.010550 -0.010574 0.999888 ) REMARK 3 VECTOR_4 = ( 48.9629 -45.9887 -29.5468 ) REMARK 3 REMARK 3 MATRIX_5 = ( -0.010011 -0.999911 -0.008770 ) REMARK 3 ( 0.999838 -0.010141 0.014863 ) REMARK 3 ( -0.014951 -0.008620 0.999851 ) REMARK 3 VECTOR_5 = ( 48.0912 -47.3711 31.8114 ) REMARK 3 REMARK 3 MATRIX_6 = ( 0.999542 -0.030236 -0.001427 ) REMARK 3 ( -0.030235 -0.999542 0.001202 ) REMARK 3 ( -0.001463 -0.001158 -0.999998 ) REMARK 3 VECTOR_6 = ( -45.5886 48.9605 61.9827 ) REMARK 3 REMARK 3 REMARK 3 MATRIX_7 = ( 1.000000 0.000000 0.000000 ) REMARK 3 ( 0.000000 1.000000 0.000000 ) REMARK 3 ( 0.000000 0.000000 1.000000 ) REMARK 3 VECTOR_7 = ( 0.0000 0.0000 0.0000 ) REMARK 3 REMARK 3 MATRIX_8 = ( -0.025450 -0.999672 -0.002776 ) REMARK 3 ( -0.999629 0.025476 -0.009636 ) REMARK 3 ( 0.009703 0.002530 -0.999950 ) REMARK 3 VECTOR_8 = ( 95.7336 93.6049 30.5814 ). REMARK 3 REMARK 3 AUTHOR HAS STATED ONE COMPLICATION: BECAUSE OF THE STACKING FAULT- REMARK 3 TYPE DISORDER, THE ALTERNATE CONFORMERS IN THE CURRENT PDB FILE REMARK 3 WERE ASSIGNED DIFFERENT CHAIN IDS DURING AUTHOR'S REFINEMENT. THE REMARK 3 TWO ALTERNATE CONFORMERS OF CHAIN C WERE ASSIGNED CHAIN REMARK 3 IDS C AND F, AND THE TWO CONFORMERS OF CHAIN D WERE ASSIGNED D AND REMARK 3 E. DURING THE PROCESSING OF DEPOSITION, ALTERNATE REMARK 3 CONFORMERS WERE USED BECAUSE OF THE ESSENTIAL PDB FORMAT REMARK 3 REQUIREMENT. THEREFORE, DURING AUTHOR'S REFINEMENT, THERE WERE REMARK 3 SIX CHAINS A/B/C/D/E/F. TO GET THE RIGHT OCCUPANCIES DURING THE REMARK 3 REFINEMENT (1.0 ON CHAINS A/B, 0.5 ON CHAINS C/D/E/F), REMARK 3 AUTHOR SET THE OCCUPANCIES OF THE STARTING FILE AT 0.5, AND PUT IN REMARK 3 TWO COPIES OF THE NCS MATRICES FOR THE CHAINS A AND B WITH REMARK 3 OCCUPANCY OF 1.0. SO THERE ARE 8 MATRICES. REMARK 4 REMARK 4 2PZX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000042974. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0781 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18125 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1FJR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M AMMONIUM SULFATE 2% W/V PEG 400 REMARK 280 0.1 M HEPES-KOH PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.91650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.91650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ILE A 187 O ILE A 187 2665 1.92 REMARK 500 NH2 ARG B 109 NH2 ARG D 109 3654 1.95 REMARK 500 O ILE B 187 O ILE B 187 2665 1.97 REMARK 500 NH2 ARG A 109 NH2 ARG C 109 3655 1.98 REMARK 500 O LEU B 91 O LEU D 91 3654 2.08 REMARK 500 O LEU A 91 O LEU C 91 3655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 4 37.83 21.16 REMARK 500 TYR A 7 -72.35 -53.67 REMARK 500 PHE A 8 -4.65 -41.53 REMARK 500 SER A 14 0.74 -57.54 REMARK 500 ASN A 21 24.87 -68.59 REMARK 500 ASP A 47 74.51 64.34 REMARK 500 ARG A 54 78.46 -62.56 REMARK 500 CYS A 59 48.03 -73.31 REMARK 500 CYS A 61 -13.48 -49.38 REMARK 500 LYS A 64 129.93 -174.42 REMARK 500 ARG A 68 108.46 -50.63 REMARK 500 PRO A 72 -160.49 -53.98 REMARK 500 ASP A 84 65.49 -119.96 REMARK 500 ASP A 95 103.11 -39.41 REMARK 500 CYS A 126 152.89 165.35 REMARK 500 ARG A 155 61.88 26.44 REMARK 500 LYS A 160 -5.03 -41.97 REMARK 500 ALA A 175 -149.33 -120.83 REMARK 500 THR A 176 117.86 -167.24 REMARK 500 ILE A 187 -77.37 -136.18 REMARK 500 GLU B 4 37.82 21.18 REMARK 500 TYR B 7 -72.34 -53.70 REMARK 500 PHE B 8 -4.67 -41.54 REMARK 500 SER B 14 0.76 -57.51 REMARK 500 ASN B 21 24.87 -68.58 REMARK 500 ASP B 47 74.48 64.37 REMARK 500 ARG B 54 78.45 -62.53 REMARK 500 CYS B 59 47.99 -73.27 REMARK 500 CYS B 61 -13.48 -49.40 REMARK 500 LYS B 64 129.94 -174.43 REMARK 500 ARG B 68 108.49 -50.60 REMARK 500 PRO B 72 -160.48 -54.01 REMARK 500 ASP B 84 65.51 -119.99 REMARK 500 ASP B 95 103.12 -39.43 REMARK 500 CYS B 126 152.93 165.39 REMARK 500 ARG B 155 61.89 26.42 REMARK 500 LYS B 160 -4.97 -42.02 REMARK 500 ALA B 175 -149.34 -120.88 REMARK 500 THR B 176 117.92 -167.23 REMARK 500 ILE B 187 -77.38 -136.19 REMARK 500 GLU C 4 37.82 21.14 REMARK 500 GLU C 4 37.81 21.12 REMARK 500 TYR C 7 -72.42 -53.61 REMARK 500 TYR C 7 -72.31 -53.72 REMARK 500 PHE C 8 -4.61 -41.53 REMARK 500 PHE C 8 -4.67 -41.55 REMARK 500 SER C 14 0.73 -57.54 REMARK 500 SER C 14 0.72 -57.52 REMARK 500 ASN C 21 24.93 -68.61 REMARK 500 ASN C 21 24.86 -68.60 REMARK 500 REMARK 500 THIS ENTRY HAS 119 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FJR RELATED DB: PDB DBREF 2PZX A 1 188 UNP O97148 MTH_DROME 25 212 DBREF 2PZX B 1 188 UNP O97148 MTH_DROME 25 212 DBREF 2PZX C 1 188 UNP O97148 MTH_DROME 25 212 DBREF 2PZX D 1 188 UNP O97148 MTH_DROME 25 212 SEQRES 1 A 188 ASP ILE LEU GLU CYS ASP TYR PHE ASP THR VAL ASP ILE SEQRES 2 A 188 SER ALA ALA GLN LYS LEU GLN ASN GLY SER TYR LEU PHE SEQRES 3 A 188 GLU GLY LEU LEU VAL PRO ALA ILE LEU THR GLY GLU TYR SEQRES 4 A 188 ASP PHE ARG ILE LEU PRO ASP ASP SER LYS GLN LYS VAL SEQRES 5 A 188 ALA ARG HIS ILE ARG GLY CYS VAL CYS LYS LEU LYS PRO SEQRES 6 A 188 CYS VAL ARG PHE CYS CYS PRO HIS ASP HIS ILE MET ASP SEQRES 7 A 188 ASN GLY VAL CYS TYR ASP ASN MET SER ASP GLU GLU LEU SEQRES 8 A 188 ALA GLU LEU ASP PRO PHE LEU ASN VAL THR LEU ASP ASP SEQRES 9 A 188 GLY SER VAL SER ARG ARG HIS PHE LYS ASN GLU LEU ILE SEQRES 10 A 188 VAL GLN TRP ASP LEU PRO MET PRO CYS ASP GLY MET PHE SEQRES 11 A 188 TYR LEU ASP ASN ARG GLU GLU GLN ASP LYS TYR THR LEU SEQRES 12 A 188 PHE GLU ASN GLY THR PHE PHE ARG HIS PHE ASP ARG VAL SEQRES 13 A 188 THR LEU ARG LYS ARG GLU TYR CYS LEU GLN HIS LEU THR SEQRES 14 A 188 PHE ALA ASP GLY ASN ALA THR SER ILE ARG ILE ALA PRO SEQRES 15 A 188 HIS ASN CYS LEU ILE VAL SEQRES 1 B 188 ASP ILE LEU GLU CYS ASP TYR PHE ASP THR VAL ASP ILE SEQRES 2 B 188 SER ALA ALA GLN LYS LEU GLN ASN GLY SER TYR LEU PHE SEQRES 3 B 188 GLU GLY LEU LEU VAL PRO ALA ILE LEU THR GLY GLU TYR SEQRES 4 B 188 ASP PHE ARG ILE LEU PRO ASP ASP SER LYS GLN LYS VAL SEQRES 5 B 188 ALA ARG HIS ILE ARG GLY CYS VAL CYS LYS LEU LYS PRO SEQRES 6 B 188 CYS VAL ARG PHE CYS CYS PRO HIS ASP HIS ILE MET ASP SEQRES 7 B 188 ASN GLY VAL CYS TYR ASP ASN MET SER ASP GLU GLU LEU SEQRES 8 B 188 ALA GLU LEU ASP PRO PHE LEU ASN VAL THR LEU ASP ASP SEQRES 9 B 188 GLY SER VAL SER ARG ARG HIS PHE LYS ASN GLU LEU ILE SEQRES 10 B 188 VAL GLN TRP ASP LEU PRO MET PRO CYS ASP GLY MET PHE SEQRES 11 B 188 TYR LEU ASP ASN ARG GLU GLU GLN ASP LYS TYR THR LEU SEQRES 12 B 188 PHE GLU ASN GLY THR PHE PHE ARG HIS PHE ASP ARG VAL SEQRES 13 B 188 THR LEU ARG LYS ARG GLU TYR CYS LEU GLN HIS LEU THR SEQRES 14 B 188 PHE ALA ASP GLY ASN ALA THR SER ILE ARG ILE ALA PRO SEQRES 15 B 188 HIS ASN CYS LEU ILE VAL SEQRES 1 C 188 ASP ILE LEU GLU CYS ASP TYR PHE ASP THR VAL ASP ILE SEQRES 2 C 188 SER ALA ALA GLN LYS LEU GLN ASN GLY SER TYR LEU PHE SEQRES 3 C 188 GLU GLY LEU LEU VAL PRO ALA ILE LEU THR GLY GLU TYR SEQRES 4 C 188 ASP PHE ARG ILE LEU PRO ASP ASP SER LYS GLN LYS VAL SEQRES 5 C 188 ALA ARG HIS ILE ARG GLY CYS VAL CYS LYS LEU LYS PRO SEQRES 6 C 188 CYS VAL ARG PHE CYS CYS PRO HIS ASP HIS ILE MET ASP SEQRES 7 C 188 ASN GLY VAL CYS TYR ASP ASN MET SER ASP GLU GLU LEU SEQRES 8 C 188 ALA GLU LEU ASP PRO PHE LEU ASN VAL THR LEU ASP ASP SEQRES 9 C 188 GLY SER VAL SER ARG ARG HIS PHE LYS ASN GLU LEU ILE SEQRES 10 C 188 VAL GLN TRP ASP LEU PRO MET PRO CYS ASP GLY MET PHE SEQRES 11 C 188 TYR LEU ASP ASN ARG GLU GLU GLN ASP LYS TYR THR LEU SEQRES 12 C 188 PHE GLU ASN GLY THR PHE PHE ARG HIS PHE ASP ARG VAL SEQRES 13 C 188 THR LEU ARG LYS ARG GLU TYR CYS LEU GLN HIS LEU THR SEQRES 14 C 188 PHE ALA ASP GLY ASN ALA THR SER ILE ARG ILE ALA PRO SEQRES 15 C 188 HIS ASN CYS LEU ILE VAL SEQRES 1 D 188 ASP ILE LEU GLU CYS ASP TYR PHE ASP THR VAL ASP ILE SEQRES 2 D 188 SER ALA ALA GLN LYS LEU GLN ASN GLY SER TYR LEU PHE SEQRES 3 D 188 GLU GLY LEU LEU VAL PRO ALA ILE LEU THR GLY GLU TYR SEQRES 4 D 188 ASP PHE ARG ILE LEU PRO ASP ASP SER LYS GLN LYS VAL SEQRES 5 D 188 ALA ARG HIS ILE ARG GLY CYS VAL CYS LYS LEU LYS PRO SEQRES 6 D 188 CYS VAL ARG PHE CYS CYS PRO HIS ASP HIS ILE MET ASP SEQRES 7 D 188 ASN GLY VAL CYS TYR ASP ASN MET SER ASP GLU GLU LEU SEQRES 8 D 188 ALA GLU LEU ASP PRO PHE LEU ASN VAL THR LEU ASP ASP SEQRES 9 D 188 GLY SER VAL SER ARG ARG HIS PHE LYS ASN GLU LEU ILE SEQRES 10 D 188 VAL GLN TRP ASP LEU PRO MET PRO CYS ASP GLY MET PHE SEQRES 11 D 188 TYR LEU ASP ASN ARG GLU GLU GLN ASP LYS TYR THR LEU SEQRES 12 D 188 PHE GLU ASN GLY THR PHE PHE ARG HIS PHE ASP ARG VAL SEQRES 13 D 188 THR LEU ARG LYS ARG GLU TYR CYS LEU GLN HIS LEU THR SEQRES 14 D 188 PHE ALA ASP GLY ASN ALA THR SER ILE ARG ILE ALA PRO SEQRES 15 D 188 HIS ASN CYS LEU ILE VAL HELIX 1 1 ASP A 6 THR A 10 5 5 HELIX 2 2 PRO A 32 ILE A 34 5 3 HELIX 3 3 VAL A 60 LEU A 63 5 4 HELIX 4 4 SER A 87 ALA A 92 1 6 HELIX 5 5 GLU A 136 ASP A 139 5 4 HELIX 6 6 ASP B 6 THR B 10 5 5 HELIX 7 7 PRO B 32 ILE B 34 5 3 HELIX 8 8 VAL B 60 LEU B 63 5 4 HELIX 9 9 SER B 87 ALA B 92 1 6 HELIX 10 10 GLU B 136 ASP B 139 5 4 HELIX 11 11 ASP C 6 THR C 10 5 5 HELIX 12 12 PRO C 32 ILE C 34 5 3 HELIX 13 13 VAL C 60 LEU C 63 5 4 HELIX 14 14 SER C 87 ALA C 92 1 6 HELIX 15 15 GLU C 136 ASP C 139 5 4 HELIX 16 16 ASP D 6 THR D 10 5 5 HELIX 17 17 PRO D 32 ILE D 34 5 3 HELIX 18 18 VAL D 60 LEU D 63 5 4 HELIX 19 19 SER D 87 ALA D 92 1 6 HELIX 20 20 GLU D 136 ASP D 139 5 4 SHEET 1 A 3 VAL A 11 ASP A 12 0 SHEET 2 A 3 LYS A 49 GLY A 58 -1 O GLY A 58 N VAL A 11 SHEET 3 A 3 THR A 36 ILE A 43 -1 N GLY A 37 O ARG A 57 SHEET 1 B 3 GLN A 17 LYS A 18 0 SHEET 2 B 3 TYR A 24 PHE A 26 -1 O LEU A 25 N GLN A 17 SHEET 3 B 3 LEU A 29 VAL A 31 -1 O LEU A 29 N PHE A 26 SHEET 1 C 2 CYS A 66 ARG A 68 0 SHEET 2 C 2 ILE A 117 GLN A 119 1 O ILE A 117 N VAL A 67 SHEET 1 D 5 VAL A 81 TYR A 83 0 SHEET 2 D 5 ILE A 76 ASP A 78 -1 N ILE A 76 O TYR A 83 SHEET 3 D 5 TYR A 163 THR A 169 1 O HIS A 167 N MET A 77 SHEET 4 D 5 ILE A 178 ASN A 184 -1 O ALA A 181 N GLN A 166 SHEET 5 D 5 LEU A 94 ASP A 95 1 N ASP A 95 O ILE A 178 SHEET 1 E 5 VAL A 81 TYR A 83 0 SHEET 2 E 5 ILE A 76 ASP A 78 -1 N ILE A 76 O TYR A 83 SHEET 3 E 5 TYR A 163 THR A 169 1 O HIS A 167 N MET A 77 SHEET 4 E 5 ILE A 178 ASN A 184 -1 O ALA A 181 N GLN A 166 SHEET 5 E 5 PHE A 130 TYR A 131 -1 N PHE A 130 O ASN A 184 SHEET 1 F 5 VAL A 107 HIS A 111 0 SHEET 2 F 5 PHE A 97 THR A 101 -1 N LEU A 98 O ARG A 110 SHEET 3 F 5 TYR A 141 PHE A 144 1 O LEU A 143 N THR A 101 SHEET 4 F 5 PHE A 149 ARG A 151 -1 O PHE A 150 N THR A 142 SHEET 5 F 5 VAL A 156 LEU A 158 -1 O LEU A 158 N PHE A 149 SHEET 1 G 3 VAL B 11 ASP B 12 0 SHEET 2 G 3 LYS B 49 GLY B 58 -1 O GLY B 58 N VAL B 11 SHEET 3 G 3 THR B 36 ILE B 43 -1 N GLY B 37 O ARG B 57 SHEET 1 H 3 GLN B 17 LYS B 18 0 SHEET 2 H 3 TYR B 24 PHE B 26 -1 O LEU B 25 N GLN B 17 SHEET 3 H 3 LEU B 29 VAL B 31 -1 O LEU B 29 N PHE B 26 SHEET 1 I 2 CYS B 66 ARG B 68 0 SHEET 2 I 2 ILE B 117 GLN B 119 1 O ILE B 117 N VAL B 67 SHEET 1 J 5 VAL B 81 TYR B 83 0 SHEET 2 J 5 ILE B 76 ASP B 78 -1 N ILE B 76 O TYR B 83 SHEET 3 J 5 TYR B 163 THR B 169 1 O HIS B 167 N MET B 77 SHEET 4 J 5 ILE B 178 ASN B 184 -1 O ALA B 181 N GLN B 166 SHEET 5 J 5 LEU B 94 ASP B 95 1 N ASP B 95 O ILE B 178 SHEET 1 K 5 VAL B 81 TYR B 83 0 SHEET 2 K 5 ILE B 76 ASP B 78 -1 N ILE B 76 O TYR B 83 SHEET 3 K 5 TYR B 163 THR B 169 1 O HIS B 167 N MET B 77 SHEET 4 K 5 ILE B 178 ASN B 184 -1 O ALA B 181 N GLN B 166 SHEET 5 K 5 PHE B 130 TYR B 131 -1 N PHE B 130 O ASN B 184 SHEET 1 L 5 VAL B 107 HIS B 111 0 SHEET 2 L 5 PHE B 97 THR B 101 -1 N LEU B 98 O ARG B 110 SHEET 3 L 5 TYR B 141 PHE B 144 1 O LEU B 143 N THR B 101 SHEET 4 L 5 PHE B 149 ARG B 151 -1 O PHE B 150 N THR B 142 SHEET 5 L 5 VAL B 156 LEU B 158 -1 O LEU B 158 N PHE B 149 SHEET 1 M 3 VAL C 11 ASP C 12 0 SHEET 2 M 3 LYS C 49 GLY C 58 -1 O GLY C 58 N VAL C 11 SHEET 3 M 3 THR C 36 ILE C 43 -1 N GLY C 37 O ARG C 57 SHEET 1 N 3 GLN C 17 LYS C 18 0 SHEET 2 N 3 TYR C 24 PHE C 26 -1 O LEU C 25 N GLN C 17 SHEET 3 N 3 LEU C 29 VAL C 31 -1 O LEU C 29 N PHE C 26 SHEET 1 O 2 CYS C 66 ARG C 68 0 SHEET 2 O 2 ILE C 117 GLN C 119 1 O ILE C 117 N VAL C 67 SHEET 1 P 5 VAL C 81 TYR C 83 0 SHEET 2 P 5 ILE C 76 ASP C 78 -1 N ILE C 76 O TYR C 83 SHEET 3 P 5 TYR C 163 THR C 169 1 O HIS C 167 N MET C 77 SHEET 4 P 5 ILE C 178 ASN C 184 -1 O ALA C 181 N GLN C 166 SHEET 5 P 5 LEU C 94 ASP C 95 1 N ASP C 95 O ILE C 178 SHEET 1 Q 5 VAL C 81 TYR C 83 0 SHEET 2 Q 5 ILE C 76 ASP C 78 -1 N ILE C 76 O TYR C 83 SHEET 3 Q 5 TYR C 163 THR C 169 1 O HIS C 167 N MET C 77 SHEET 4 Q 5 ILE C 178 ASN C 184 -1 O ALA C 181 N GLN C 166 SHEET 5 Q 5 PHE C 130 TYR C 131 -1 N PHE C 130 O ASN C 184 SHEET 1 R 5 VAL C 107 HIS C 111 0 SHEET 2 R 5 PHE C 97 THR C 101 -1 N LEU C 98 O ARG C 110 SHEET 3 R 5 TYR C 141 PHE C 144 1 O LEU C 143 N THR C 101 SHEET 4 R 5 PHE C 149 ARG C 151 -1 O PHE C 150 N THR C 142 SHEET 5 R 5 VAL C 156 LEU C 158 -1 O LEU C 158 N PHE C 149 SHEET 1 S 3 VAL D 11 ASP D 12 0 SHEET 2 S 3 LYS D 49 GLY D 58 -1 O GLY D 58 N VAL D 11 SHEET 3 S 3 THR D 36 ILE D 43 -1 N GLY D 37 O ARG D 57 SHEET 1 T 3 GLN D 17 LYS D 18 0 SHEET 2 T 3 TYR D 24 PHE D 26 -1 O LEU D 25 N GLN D 17 SHEET 3 T 3 LEU D 29 VAL D 31 -1 O LEU D 29 N PHE D 26 SHEET 1 U 2 CYS D 66 ARG D 68 0 SHEET 2 U 2 ILE D 117 GLN D 119 1 O ILE D 117 N VAL D 67 SHEET 1 V 5 VAL D 81 TYR D 83 0 SHEET 2 V 5 ILE D 76 ASP D 78 -1 N ILE D 76 O TYR D 83 SHEET 3 V 5 TYR D 163 THR D 169 1 O HIS D 167 N MET D 77 SHEET 4 V 5 ILE D 178 ASN D 184 -1 O ALA D 181 N GLN D 166 SHEET 5 V 5 LEU D 94 ASP D 95 1 N ASP D 95 O ILE D 178 SHEET 1 W 5 VAL D 81 TYR D 83 0 SHEET 2 W 5 ILE D 76 ASP D 78 -1 N ILE D 76 O TYR D 83 SHEET 3 W 5 TYR D 163 THR D 169 1 O HIS D 167 N MET D 77 SHEET 4 W 5 ILE D 178 ASN D 184 -1 O ALA D 181 N GLN D 166 SHEET 5 W 5 PHE D 130 TYR D 131 -1 N PHE D 130 O ASN D 184 SHEET 1 X 5 VAL D 107 HIS D 111 0 SHEET 2 X 5 PHE D 97 THR D 101 -1 N LEU D 98 O ARG D 110 SHEET 3 X 5 TYR D 141 PHE D 144 1 O LEU D 143 N THR D 101 SHEET 4 X 5 PHE D 149 ARG D 151 -1 O PHE D 150 N THR D 142 SHEET 5 X 5 VAL D 156 LEU D 158 -1 O LEU D 158 N PHE D 149 SSBOND 1 CYS A 5 CYS A 59 1555 1555 2.04 SSBOND 2 CYS A 61 CYS A 66 1555 1555 2.03 SSBOND 3 CYS A 70 CYS A 164 1555 1555 2.03 SSBOND 4 CYS A 71 CYS A 82 1555 1555 2.03 SSBOND 5 CYS A 126 CYS A 185 1555 1555 2.04 SSBOND 6 CYS B 5 CYS B 59 1555 1555 2.04 SSBOND 7 CYS B 61 CYS B 66 1555 1555 2.04 SSBOND 8 CYS B 70 CYS B 164 1555 1555 2.03 SSBOND 9 CYS B 71 CYS B 82 1555 1555 2.03 SSBOND 10 CYS B 126 CYS B 185 1555 1555 2.04 SSBOND 11 CYS C 5 CYS C 59 1555 1555 2.04 SSBOND 12 CYS C 61 CYS C 66 1555 1555 2.04 SSBOND 13 CYS C 70 CYS C 164 1555 1555 2.03 SSBOND 14 CYS C 71 CYS C 82 1555 1555 2.03 SSBOND 15 CYS C 126 CYS C 185 1555 1555 2.04 SSBOND 16 CYS D 5 CYS D 59 1555 1555 2.04 SSBOND 17 CYS D 61 CYS D 66 1555 1555 2.03 SSBOND 18 CYS D 70 CYS D 164 1555 1555 2.03 SSBOND 19 CYS D 71 CYS D 82 1555 1555 2.03 SSBOND 20 CYS D 126 CYS D 185 1555 1555 2.04 CRYST1 94.233 94.233 173.833 90.00 90.00 90.00 P 42 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010612 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010612 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005753 0.00000