PDB Short entry for 2QKP HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-JUL-07 2QKP TITLE CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF SMU_1151C FROM STREPTOCOCCUS TITLE 2 MUTANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN: RESIDUES 315-454; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 210007; SOURCE 4 STRAIN: UA159; SOURCE 5 ATCC: 700610; SOURCE 6 GENE: SMU_1151C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BS-PSGX4(BC) KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,R.TORO,M.GILMORE,B.WU,K.BAIN,T.GHEYI,J.M.SAUDER, AUTHOR 2 S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (NYSGXRC) REVDAT 7 21-FEB-24 2QKP 1 REMARK REVDAT 6 03-FEB-21 2QKP 1 AUTHOR JRNL REMARK SEQADV REVDAT 5 14-NOV-18 2QKP 1 AUTHOR REVDAT 4 18-OCT-17 2QKP 1 REMARK REVDAT 3 13-JUL-11 2QKP 1 VERSN REVDAT 2 24-FEB-09 2QKP 1 VERSN REVDAT 1 24-JUL-07 2QKP 0 JRNL AUTH U.A.RAMAGOPAL,R.TORO,M.GILMORE,B.WU,K.BAIN,T.GHEYI, JRNL AUTH 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL STRUCTURE OF C-TERMINAL DOMAIN OF SMU_1151C FROM JRNL TITL 2 STREPTOCOCCUS MUTANS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 60316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3044 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4089 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 220 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4501 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 437 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.81000 REMARK 3 B22 (A**2) : 0.79000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.85000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.521 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4694 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6357 ; 1.347 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 559 ; 6.114 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 258 ;35.506 ;24.651 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 809 ;14.975 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;15.368 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 675 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3672 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1921 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3243 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 374 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 100 ; 0.221 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.151 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2854 ; 1.041 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4526 ; 1.677 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2058 ; 2.452 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1830 ; 3.545 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QKP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043719. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63330 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.05000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : 0.33800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.280 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.5, 20% PEG 3000, 0.2M REMARK 280 SODIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.95550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT APPEARS TO BE DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 312 REMARK 465 PHE A 451 REMARK 465 ASN A 452 REMARK 465 ARG A 453 REMARK 465 ASP A 454 REMARK 465 GLU A 455 REMARK 465 GLY A 456 REMARK 465 HIS A 457 REMARK 465 HIS A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 465 HIS A 461 REMARK 465 HIS A 462 REMARK 465 MET B 312 REMARK 465 SER B 313 REMARK 465 ASN B 452 REMARK 465 ARG B 453 REMARK 465 ASP B 454 REMARK 465 GLU B 455 REMARK 465 GLY B 456 REMARK 465 HIS B 457 REMARK 465 HIS B 458 REMARK 465 HIS B 459 REMARK 465 HIS B 460 REMARK 465 HIS B 461 REMARK 465 HIS B 462 REMARK 465 MET C 312 REMARK 465 SER C 313 REMARK 465 ASN C 452 REMARK 465 ARG C 453 REMARK 465 ASP C 454 REMARK 465 GLU C 455 REMARK 465 GLY C 456 REMARK 465 HIS C 457 REMARK 465 HIS C 458 REMARK 465 HIS C 459 REMARK 465 HIS C 460 REMARK 465 HIS C 461 REMARK 465 HIS C 462 REMARK 465 MET D 312 REMARK 465 SER D 313 REMARK 465 LEU D 314 REMARK 465 SER D 449 REMARK 465 GLU D 450 REMARK 465 PHE D 451 REMARK 465 ASN D 452 REMARK 465 ARG D 453 REMARK 465 ASP D 454 REMARK 465 GLU D 455 REMARK 465 GLY D 456 REMARK 465 HIS D 457 REMARK 465 HIS D 458 REMARK 465 HIS D 459 REMARK 465 HIS D 460 REMARK 465 HIS D 461 REMARK 465 HIS D 462 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 340 47.67 -84.28 REMARK 500 ASP A 357 77.79 -107.80 REMARK 500 ASP A 357 76.43 -107.80 REMARK 500 SER A 358 -64.92 -90.57 REMARK 500 GLU B 378 -8.85 -52.10 REMARK 500 PRO C 340 46.82 -81.11 REMARK 500 ASP C 357 71.00 -118.62 REMARK 500 ASP C 448 30.11 -99.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10381G RELATED DB: TARGETDB DBREF 2QKP A 315 454 UNP Q8DU08 Q8DU08_STRMU 315 454 DBREF 2QKP B 315 454 UNP Q8DU08 Q8DU08_STRMU 315 454 DBREF 2QKP C 315 454 UNP Q8DU08 Q8DU08_STRMU 315 454 DBREF 2QKP D 315 454 UNP Q8DU08 Q8DU08_STRMU 315 454 SEQADV 2QKP MET A 312 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP SER A 313 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP LEU A 314 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLU A 455 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLY A 456 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS A 457 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS A 458 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS A 459 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS A 460 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS A 461 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS A 462 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP MET B 312 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP SER B 313 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP LEU B 314 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLU B 455 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLY B 456 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS B 457 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS B 458 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS B 459 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS B 460 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS B 461 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS B 462 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP MET C 312 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP SER C 313 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP LEU C 314 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLU C 455 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLY C 456 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS C 457 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS C 458 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS C 459 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS C 460 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS C 461 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS C 462 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP MET D 312 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP SER D 313 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP LEU D 314 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLU D 455 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP GLY D 456 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS D 457 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS D 458 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS D 459 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS D 460 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS D 461 UNP Q8DU08 CLONING ARTIFACT SEQADV 2QKP HIS D 462 UNP Q8DU08 CLONING ARTIFACT SEQRES 1 A 151 MET SER LEU ASP ARG THR THR GLN GLN PRO PHE GLY ASN SEQRES 2 A 151 GLY TYR LEU SER VAL GLU GLN ALA ASN LEU ILE LEU ASN SEQRES 3 A 151 HIS LEU PRO LEU GLU ILE THR PHE VAL ASN LYS ASP ASP SEQRES 4 A 151 ILE PHE GLN TYR TYR ASN ASP SER VAL PRO ALA ALA GLU SEQRES 5 A 151 MET VAL PHE LYS ARG THR PRO SER GLN VAL GLY ARG ASN SEQRES 6 A 151 VAL GLU LEU CYS HIS PRO PRO LYS VAL LEU ASP LYS VAL SEQRES 7 A 151 LYS LYS VAL PHE GLU LEU LEU ARG ASN GLY GLN ARG ASP SEQRES 8 A 151 LYS VAL ASN MET TRP PHE GLN SER GLU ARG LEU GLY LYS SEQRES 9 A 151 PHE VAL TYR VAL THR TYR ALA ALA VAL ARG ASP GLN ALA SEQRES 10 A 151 GLY ASP PHE GLN GLY VAL LEU GLU TYR VAL GLN ASP ILE SEQRES 11 A 151 LYS PRO PHE PHE GLU LEU ASP SER GLU PHE ASN ARG ASP SEQRES 12 A 151 GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 151 MET SER LEU ASP ARG THR THR GLN GLN PRO PHE GLY ASN SEQRES 2 B 151 GLY TYR LEU SER VAL GLU GLN ALA ASN LEU ILE LEU ASN SEQRES 3 B 151 HIS LEU PRO LEU GLU ILE THR PHE VAL ASN LYS ASP ASP SEQRES 4 B 151 ILE PHE GLN TYR TYR ASN ASP SER VAL PRO ALA ALA GLU SEQRES 5 B 151 MET VAL PHE LYS ARG THR PRO SER GLN VAL GLY ARG ASN SEQRES 6 B 151 VAL GLU LEU CYS HIS PRO PRO LYS VAL LEU ASP LYS VAL SEQRES 7 B 151 LYS LYS VAL PHE GLU LEU LEU ARG ASN GLY GLN ARG ASP SEQRES 8 B 151 LYS VAL ASN MET TRP PHE GLN SER GLU ARG LEU GLY LYS SEQRES 9 B 151 PHE VAL TYR VAL THR TYR ALA ALA VAL ARG ASP GLN ALA SEQRES 10 B 151 GLY ASP PHE GLN GLY VAL LEU GLU TYR VAL GLN ASP ILE SEQRES 11 B 151 LYS PRO PHE PHE GLU LEU ASP SER GLU PHE ASN ARG ASP SEQRES 12 B 151 GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 C 151 MET SER LEU ASP ARG THR THR GLN GLN PRO PHE GLY ASN SEQRES 2 C 151 GLY TYR LEU SER VAL GLU GLN ALA ASN LEU ILE LEU ASN SEQRES 3 C 151 HIS LEU PRO LEU GLU ILE THR PHE VAL ASN LYS ASP ASP SEQRES 4 C 151 ILE PHE GLN TYR TYR ASN ASP SER VAL PRO ALA ALA GLU SEQRES 5 C 151 MET VAL PHE LYS ARG THR PRO SER GLN VAL GLY ARG ASN SEQRES 6 C 151 VAL GLU LEU CYS HIS PRO PRO LYS VAL LEU ASP LYS VAL SEQRES 7 C 151 LYS LYS VAL PHE GLU LEU LEU ARG ASN GLY GLN ARG ASP SEQRES 8 C 151 LYS VAL ASN MET TRP PHE GLN SER GLU ARG LEU GLY LYS SEQRES 9 C 151 PHE VAL TYR VAL THR TYR ALA ALA VAL ARG ASP GLN ALA SEQRES 10 C 151 GLY ASP PHE GLN GLY VAL LEU GLU TYR VAL GLN ASP ILE SEQRES 11 C 151 LYS PRO PHE PHE GLU LEU ASP SER GLU PHE ASN ARG ASP SEQRES 12 C 151 GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 D 151 MET SER LEU ASP ARG THR THR GLN GLN PRO PHE GLY ASN SEQRES 2 D 151 GLY TYR LEU SER VAL GLU GLN ALA ASN LEU ILE LEU ASN SEQRES 3 D 151 HIS LEU PRO LEU GLU ILE THR PHE VAL ASN LYS ASP ASP SEQRES 4 D 151 ILE PHE GLN TYR TYR ASN ASP SER VAL PRO ALA ALA GLU SEQRES 5 D 151 MET VAL PHE LYS ARG THR PRO SER GLN VAL GLY ARG ASN SEQRES 6 D 151 VAL GLU LEU CYS HIS PRO PRO LYS VAL LEU ASP LYS VAL SEQRES 7 D 151 LYS LYS VAL PHE GLU LEU LEU ARG ASN GLY GLN ARG ASP SEQRES 8 D 151 LYS VAL ASN MET TRP PHE GLN SER GLU ARG LEU GLY LYS SEQRES 9 D 151 PHE VAL TYR VAL THR TYR ALA ALA VAL ARG ASP GLN ALA SEQRES 10 D 151 GLY ASP PHE GLN GLY VAL LEU GLU TYR VAL GLN ASP ILE SEQRES 11 D 151 LYS PRO PHE PHE GLU LEU ASP SER GLU PHE ASN ARG ASP SEQRES 12 D 151 GLU GLY HIS HIS HIS HIS HIS HIS HET EDO B 603 4 HET EDO C 602 4 HET GOL D 601 6 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *437(H2 O) HELIX 1 1 SER A 328 LEU A 339 1 12 HELIX 2 2 PRO A 360 MET A 364 5 5 HELIX 3 3 THR A 369 VAL A 373 5 5 HELIX 4 4 ASN A 376 CYS A 380 5 5 HELIX 5 5 PRO A 382 ASN A 398 1 17 HELIX 6 6 LYS A 442 GLU A 450 5 9 HELIX 7 7 SER B 328 ASN B 337 1 10 HELIX 8 8 PRO B 360 MET B 364 5 5 HELIX 9 9 THR B 369 VAL B 373 5 5 HELIX 10 10 ASN B 376 CYS B 380 5 5 HELIX 11 11 PRO B 382 LYS B 384 5 3 HELIX 12 12 VAL B 385 ASN B 398 1 14 HELIX 13 13 LYS B 442 GLU B 446 5 5 HELIX 14 14 SER C 328 LEU C 339 1 12 HELIX 15 15 PRO C 360 MET C 364 5 5 HELIX 16 16 THR C 369 VAL C 373 5 5 HELIX 17 17 ASN C 376 HIS C 381 5 6 HELIX 18 18 PRO C 382 LYS C 384 5 3 HELIX 19 19 VAL C 385 ASN C 398 1 14 HELIX 20 20 LYS C 442 GLU C 446 5 5 HELIX 21 21 SER D 328 LEU D 339 1 12 HELIX 22 22 PRO D 360 MET D 364 5 5 HELIX 23 23 THR D 369 VAL D 373 5 5 HELIX 24 24 ASN D 376 CYS D 380 5 5 HELIX 25 25 PRO D 382 ASN D 398 1 17 HELIX 26 26 ILE D 441 GLU D 446 1 6 SHEET 1 A 2 GLN A 320 PHE A 322 0 SHEET 2 A 2 GLY A 325 LEU A 327 -1 O GLY A 325 N PHE A 322 SHEET 1 B 5 PHE A 352 TYR A 355 0 SHEET 2 B 5 GLU A 342 ASN A 347 -1 N PHE A 345 O TYR A 354 SHEET 3 B 5 PHE A 431 ASP A 440 -1 O GLU A 436 N THR A 344 SHEET 4 B 5 LYS A 415 ARG A 425 -1 N VAL A 424 O GLN A 432 SHEET 5 B 5 LYS A 403 SER A 410 -1 N MET A 406 O VAL A 419 SHEET 1 C 2 GLN B 320 PHE B 322 0 SHEET 2 C 2 GLY B 325 LEU B 327 -1 O LEU B 327 N GLN B 320 SHEET 1 D 5 PHE B 352 TYR B 355 0 SHEET 2 D 5 GLU B 342 ASN B 347 -1 N PHE B 345 O TYR B 354 SHEET 3 D 5 PHE B 431 ASP B 440 -1 O VAL B 434 N VAL B 346 SHEET 4 D 5 LYS B 415 ARG B 425 -1 N VAL B 424 O GLN B 432 SHEET 5 D 5 LYS B 403 SER B 410 -1 N MET B 406 O VAL B 419 SHEET 1 E 2 GLN C 320 PHE C 322 0 SHEET 2 E 2 GLY C 325 LEU C 327 -1 O LEU C 327 N GLN C 320 SHEET 1 F 5 PHE C 352 TYR C 355 0 SHEET 2 F 5 GLU C 342 ASN C 347 -1 N PHE C 345 O TYR C 354 SHEET 3 F 5 PHE C 431 ASP C 440 -1 O GLU C 436 N THR C 344 SHEET 4 F 5 LYS C 415 ARG C 425 -1 N VAL C 424 O GLN C 432 SHEET 5 F 5 LYS C 403 SER C 410 -1 N MET C 406 O VAL C 419 SHEET 1 G 2 GLN D 320 PHE D 322 0 SHEET 2 G 2 GLY D 325 LEU D 327 -1 O GLY D 325 N PHE D 322 SHEET 1 H 5 PHE D 352 TYR D 355 0 SHEET 2 H 5 GLU D 342 ASN D 347 -1 N PHE D 345 O TYR D 354 SHEET 3 H 5 PHE D 431 ASP D 440 -1 O GLU D 436 N THR D 344 SHEET 4 H 5 LYS D 415 ARG D 425 -1 N VAL D 424 O GLN D 432 SHEET 5 H 5 LYS D 403 SER D 410 -1 N MET D 406 O VAL D 419 SITE 1 AC1 5 GLU C 342 LYS C 415 VAL C 438 HOH C 608 SITE 2 AC1 5 HOH C 672 SITE 1 AC2 5 PRO B 340 GLU B 342 LYS B 415 VAL B 438 SITE 2 AC2 5 HOH B 664 SITE 1 AC3 7 PRO D 340 GLU D 342 LYS D 415 VAL D 438 SITE 2 AC3 7 GLN D 439 ASP D 440 HOH D 692 CRYST1 72.999 53.911 79.924 90.00 106.05 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013699 0.000000 0.003941 0.00000 SCALE2 0.000000 0.018549 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013019 0.00000