PDB Short entry for 2QKR HEADER TRANSFERASE 11-JUL-07 2QKR TITLE CRYPTOSPORIDIUM PARVUM CYCLIN-DEPENDENT KINASE CGD5_2510 WITH TITLE 2 INDIRUBIN 3'-MONOXIME BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDC2-LIKE CDK2/CDC28 LIKE PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.11.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM IOWA II; SOURCE 3 ORGANISM_TAXID: 353152; SOURCE 4 STRAIN: IOWA TYPE II; SOURCE 5 GENE: CGD5_2510; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DH5A; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P15-MHL-LIC KEYWDS CP-SPECIFIC CYCLIN-DEPENDENT KINASE, MALARIA, CRYPTOSPORIDIUM PARVUM, KEYWDS 2 STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.WERNIMONT,A.DONG,J.LEW,Y.H.LIN,A.HASSANALI,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,J.WEIGELT,M.SUNDSTROM,A.BOCHKAREV,R.HUI,J.D.ARTZ, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 5 30-AUG-23 2QKR 1 REMARK SEQADV REVDAT 4 18-OCT-17 2QKR 1 REMARK REVDAT 3 24-FEB-09 2QKR 1 VERSN REVDAT 2 30-OCT-07 2QKR 1 REMARK REVDAT 1 04-SEP-07 2QKR 0 JRNL AUTH A.K.WERNIMONT,A.DONG,J.LEW,Y.H.LIN,A.HASSANALI, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,M.SUNDSTROM, JRNL AUTH 3 A.BOCHKAREV,R.HUI,J.D.ARTZ JRNL TITL CRYPTOSPORIDIUM PARVUM CYCLIN-DEPENDENT KINASE CGD5_2510 JRNL TITL 2 WITH INDIRUBIN 3'-MONOXIME BOUND. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 13628 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 691 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 950 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2178 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.485 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.329 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.257 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.424 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2249 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3041 ; 1.243 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 265 ; 5.360 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;37.529 ;24.316 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 397 ;18.412 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.778 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 340 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1653 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 984 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1471 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 63 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.159 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1387 ; 0.487 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2200 ; 0.911 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 985 ; 1.058 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 841 ; 1.770 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QKR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043721. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17311 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : 0.03200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.83700 REMARK 200 R SYM FOR SHELL (I) : 0.48100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1OB3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 20000, 16% GLYCEROL, 0.1 M MES REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.57650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.06650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.06650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 150.86475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.06650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.06650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.28825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.06650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.06650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 150.86475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.06650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.06650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.28825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 100.57650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 ARG A 11 REMARK 465 GLU A 12 REMARK 465 ASN A 13 REMARK 465 LEU A 14 REMARK 465 GLN A 24 REMARK 465 LYS A 25 REMARK 465 THR A 33 REMARK 465 TYR A 34 REMARK 465 GLY A 35 REMARK 465 GLY A 45 REMARK 465 ARG A 54 REMARK 465 LEU A 55 REMARK 465 ASP A 56 REMARK 465 ALA A 57 REMARK 465 GLU A 58 REMARK 465 ASP A 59 REMARK 465 GLU A 60 REMARK 465 GLY A 61 REMARK 465 ILE A 62 REMARK 465 PRO A 63 REMARK 465 ARG A 92 REMARK 465 GLY A 156 REMARK 465 SER A 175 REMARK 465 TYR A 176 REMARK 465 THR A 177 REMARK 465 HIS A 178 REMARK 465 GLU A 179 REMARK 465 ILE A 311 REMARK 465 MET A 312 REMARK 465 ILE A 313 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 74 CD CE NZ REMARK 470 LYS A 106 CD CE NZ REMARK 470 ASP A 155 OD1 OD2 REMARK 470 ASP A 162 OD1 OD2 REMARK 470 ARG A 174 CD NE CZ NH1 NH2 REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 ARG A 242 CD NE CZ NH1 NH2 REMARK 470 GLU A 243 CD OE1 OE2 REMARK 470 ARG A 296 CZ NH1 NH2 REMARK 470 LYS A 305 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 91 N CYS A 93 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 17 CD GLN A 17 NE2 0.229 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 144 44.64 -148.27 REMARK 500 ASP A 162 77.20 63.79 REMARK 500 PHE A 163 30.82 -96.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IXM A 401 DBREF 2QKR A 19 313 UNP Q5CRJ8 Q5CRJ8_CRYPV 1 295 SEQADV 2QKR MET A 1 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR HIS A 2 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR HIS A 3 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR HIS A 4 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR HIS A 5 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR HIS A 6 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR HIS A 7 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR SER A 8 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR SER A 9 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR GLY A 10 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR ARG A 11 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR GLU A 12 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR ASN A 13 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR LEU A 14 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR TYR A 15 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR PHE A 16 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR GLN A 17 UNP Q5CRJ8 EXPRESSION TAG SEQADV 2QKR GLY A 18 UNP Q5CRJ8 EXPRESSION TAG SEQRES 1 A 313 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 313 LEU TYR PHE GLN GLY LEU MET GLU LYS TYR GLN LYS LEU SEQRES 3 A 313 GLU LYS VAL GLY GLU GLY THR TYR GLY VAL VAL TYR LYS SEQRES 4 A 313 ALA LYS ASP SER GLN GLY ARG ILE VAL ALA LEU LYS ARG SEQRES 5 A 313 ILE ARG LEU ASP ALA GLU ASP GLU GLY ILE PRO SER THR SEQRES 6 A 313 ALA ILE ARG GLU ILE SER LEU LEU LYS GLU LEU HIS HIS SEQRES 7 A 313 PRO ASN ILE VAL SER LEU ILE ASP VAL ILE HIS SER GLU SEQRES 8 A 313 ARG CYS LEU THR LEU VAL PHE GLU PHE MET GLU LYS ASP SEQRES 9 A 313 LEU LYS LYS VAL LEU ASP GLU ASN LYS THR GLY LEU GLN SEQRES 10 A 313 ASP SER GLN ILE LYS ILE TYR LEU TYR GLN LEU LEU ARG SEQRES 11 A 313 GLY VAL ALA HIS CYS HIS GLN HIS ARG ILE LEU HIS ARG SEQRES 12 A 313 ASP LEU LYS PRO GLN ASN LEU LEU ILE ASN SER ASP GLY SEQRES 13 A 313 ALA LEU LYS LEU ALA ASP PHE GLY LEU ALA ARG ALA PHE SEQRES 14 A 313 GLY ILE PRO VAL ARG SER TYR THR HIS GLU VAL VAL THR SEQRES 15 A 313 LEU TRP TYR ARG ALA PRO ASP VAL LEU MET GLY SER LYS SEQRES 16 A 313 LYS TYR SER THR SER VAL ASP ILE TRP SER ILE GLY CYS SEQRES 17 A 313 ILE PHE ALA GLU MET ILE THR GLY LYS PRO LEU PHE PRO SEQRES 18 A 313 GLY VAL THR ASP ASP ASP GLN LEU PRO LYS ILE PHE SER SEQRES 19 A 313 ILE LEU GLY THR PRO ASN PRO ARG GLU TRP PRO GLN VAL SEQRES 20 A 313 GLN GLU LEU PRO LEU TRP LYS GLN ARG THR PHE GLN VAL SEQRES 21 A 313 PHE GLU LYS LYS PRO TRP SER SER ILE ILE PRO GLY PHE SEQRES 22 A 313 CYS GLN GLU GLY ILE ASP LEU LEU SER ASN MET LEU CYS SEQRES 23 A 313 PHE ASP PRO ASN LYS ARG ILE SER ALA ARG ASP ALA MET SEQRES 24 A 313 ASN HIS PRO TYR PHE LYS ASP LEU ASP PRO GLN ILE MET SEQRES 25 A 313 ILE HET IXM A 401 21 HETNAM IXM (Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME HETSYN IXM INDIRUBIN-3'-MONOXIME FORMUL 2 IXM C16 H11 N3 O2 FORMUL 3 HOH *23(H2 O) HELIX 1 1 SER A 64 LEU A 76 1 13 HELIX 2 2 LEU A 105 ASN A 112 1 8 HELIX 3 3 GLN A 117 HIS A 138 1 22 HELIX 4 4 LYS A 146 GLN A 148 5 3 HELIX 5 5 ALA A 187 MET A 192 1 6 HELIX 6 6 THR A 199 GLY A 216 1 18 HELIX 7 7 THR A 224 ASP A 226 5 3 HELIX 8 8 ASP A 227 GLY A 237 1 11 HELIX 9 9 GLN A 246 GLU A 249 5 4 HELIX 10 10 LEU A 250 GLN A 255 1 6 HELIX 11 11 PRO A 265 ILE A 270 1 6 HELIX 12 12 CYS A 274 LEU A 285 1 12 HELIX 13 13 SER A 294 ASN A 300 1 7 HELIX 14 14 HIS A 301 LYS A 305 5 5 SHEET 1 A 2 PHE A 16 GLN A 17 0 SHEET 2 A 2 LYS A 22 TYR A 23 -1 O TYR A 23 N PHE A 16 SHEET 1 B 4 VAL A 37 LYS A 41 0 SHEET 2 B 4 ILE A 47 ARG A 52 -1 O LEU A 50 N TYR A 38 SHEET 3 B 4 LEU A 94 GLU A 99 -1 O PHE A 98 N ALA A 49 SHEET 4 B 4 LEU A 84 HIS A 89 -1 N ILE A 88 O THR A 95 SHEET 1 C 3 LYS A 103 ASP A 104 0 SHEET 2 C 3 LEU A 150 ILE A 152 -1 O ILE A 152 N LYS A 103 SHEET 3 C 3 LEU A 158 LEU A 160 -1 O LYS A 159 N LEU A 151 SHEET 1 D 2 ILE A 140 LEU A 141 0 SHEET 2 D 2 ARG A 167 ALA A 168 -1 O ARG A 167 N LEU A 141 SITE 1 AC1 10 VAL A 29 GLU A 31 VAL A 37 ALA A 49 SITE 2 AC1 10 GLU A 99 PHE A 100 MET A 101 GLU A 102 SITE 3 AC1 10 LYS A 107 LEU A 151 CRYST1 64.133 64.133 201.153 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015593 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004971 0.00000