PDB Short entry for 2QNR HEADER CELL CYCLE 19-JUL-07 2QNR TITLE HUMAN SEPTIN 2 IN COMPLEX WITH GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEPTIN-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 22-320; COMPND 5 SYNONYM: PROTEIN NEDD5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SEPT2, DIFF6, KIAA0158, NEDD5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON PLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P28A-LIC KEYWDS SEPTIN, STRUCTURAL GENOMICS CONSORTIUM, SGC, MITOSIS, GDP, CELL KEYWDS 2 CYCLE, CELL DIVISION, GTP-BINDING, NUCLEOTIDE-BINDING, KEYWDS 3 PHOSPHORYLATION EXPDTA X-RAY DIFFRACTION AUTHOR W.M.RABEH,L.NEDYALKOVA,W.TEMPEL,R.LANDRY,L.CROMBET,I.KOZIERADZKI, AUTHOR 2 G.SENISTERRA,M.VEDADI,C.H.ARROWSMITH,A.M.EDWARDS,M.SUNDSTROM, AUTHOR 3 J.WEIGELT,A.BOCHKAREV,H.PARK,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 5 25-OCT-17 2QNR 1 REMARK REVDAT 4 13-JUL-11 2QNR 1 VERSN REVDAT 3 24-FEB-09 2QNR 1 VERSN REVDAT 2 21-AUG-07 2QNR 1 REMARK REVDAT 1 31-JUL-07 2QNR 0 JRNL AUTH W.M.RABEH,L.NEDYALKOVA,W.TEMPEL,R.LANDRY,L.CROMBET, JRNL AUTH 2 I.KOZIERADZKI,G.SENISTERRA,M.VEDADI,C.H.ARROWSMITH, JRNL AUTH 3 A.M.EDWARDS,M.SUNDSTROM,J.WEIGELT,A.BOCHKAREV,H.PARK JRNL TITL HUMAN SEPTIN 2 IN COMPLEX WITH GDP. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 21100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1036 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1366 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.3460 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.4470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3515 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.87000 REMARK 3 B22 (A**2) : 0.94000 REMARK 3 B33 (A**2) : -3.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.491 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.330 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.290 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.037 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3632 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2413 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4921 ; 1.388 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5882 ; 0.889 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 442 ; 6.062 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 152 ;38.412 ;23.487 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;16.616 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;17.289 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 580 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3925 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 729 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 766 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2426 ; 0.196 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1757 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1986 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 78 ; 0.157 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.188 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 27 ; 0.341 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.179 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2325 ; 2.435 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 908 ; 0.516 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3620 ; 3.431 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1495 ; 2.324 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1301 ; 3.272 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 306 REMARK 3 ORIGIN FOR THE GROUP (A): 59.9240 11.7990 8.0290 REMARK 3 T TENSOR REMARK 3 T11: 0.2956 T22: 0.3727 REMARK 3 T33: 0.1444 T12: 0.0341 REMARK 3 T13: -0.0321 T23: -0.0751 REMARK 3 L TENSOR REMARK 3 L11: 1.1934 L22: 1.3801 REMARK 3 L33: 7.7608 L12: 0.3281 REMARK 3 L13: -2.1672 L23: -0.7029 REMARK 3 S TENSOR REMARK 3 S11: 0.0373 S12: -0.1126 S13: 0.2150 REMARK 3 S21: 0.1794 S22: 0.0448 S23: -0.0697 REMARK 3 S31: -0.1816 S32: -0.0987 S33: -0.0821 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 36 B 306 REMARK 3 ORIGIN FOR THE GROUP (A): 58.6710 -1.5540 -27.6070 REMARK 3 T TENSOR REMARK 3 T11: 0.3032 T22: 0.4065 REMARK 3 T33: 0.0775 T12: 0.0406 REMARK 3 T13: 0.0407 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.9423 L22: 3.1958 REMARK 3 L33: 4.5525 L12: 1.7210 REMARK 3 L13: 1.6760 L23: 2.8794 REMARK 3 S TENSOR REMARK 3 S11: 0.0432 S12: 0.2101 S13: -0.0346 REMARK 3 S21: -0.2275 S22: 0.0184 S23: -0.2062 REMARK 3 S31: -0.1079 S32: 0.0148 S33: -0.0615 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. COOT, O, MOLPROBITY PROGRAMS HAVE ALSO BEEN REMARK 3 USED IN THE REFINEMENT. 3. ATOMIC B-FACTORS SHOWN ARE RESIDUALS REMARK 3 FROM TLS REFINEMENT. 4. CAVEAT: RESIDUES 84-89 IN CHAIN A AND 74- REMARK 3 90 IN CHAIN B COULD NOT BE RELIABLY ASSIGNED IN THE AMINO ACID REMARK 3 SEQUENCE AND WERE MODELED AS ALANINES. REMARK 4 REMARK 4 2QNR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043829. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97770 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 0.2M TRILITHIUM CITRATE, REMARK 280 0.1M BIS-TRIS, PH 6.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 82.26800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.14750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 82.26800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.14750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION REMARK 300 ON BURIED SURFACE AREA. REMARK 300 AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN REMARK 300 IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 465 LEU A 23 REMARK 465 PRO A 24 REMARK 465 ASN A 25 REMARK 465 GLN A 26 REMARK 465 VAL A 27 REMARK 465 HIS A 28 REMARK 465 ARG A 29 REMARK 465 LYS A 30 REMARK 465 SER A 31 REMARK 465 VAL A 32 REMARK 465 LYS A 33 REMARK 465 LYS A 34 REMARK 465 GLY A 35 REMARK 465 PHE A 36 REMARK 465 THR A 60 REMARK 465 ASP A 61 REMARK 465 LEU A 62 REMARK 465 TYR A 63 REMARK 465 PRO A 64 REMARK 465 GLU A 65 REMARK 465 ARG A 66 REMARK 465 VAL A 67 REMARK 465 ILE A 68 REMARK 465 SER A 69 REMARK 465 GLY A 70 REMARK 465 ALA A 71 REMARK 465 ALA A 72 REMARK 465 GLU A 73 REMARK 465 LYS A 74 REMARK 465 ILE A 75 REMARK 465 GLU A 76 REMARK 465 ARG A 77 REMARK 465 THR A 78 REMARK 465 VAL A 79 REMARK 465 GLN A 80 REMARK 465 ILE A 81 REMARK 465 GLU A 82 REMARK 465 ALA A 83 REMARK 465 GLU A 90 REMARK 465 ARG A 91 REMARK 465 GLY A 92 REMARK 465 GLY A 104 REMARK 465 TYR A 105 REMARK 465 GLY A 106 REMARK 465 ASP A 107 REMARK 465 ALA A 108 REMARK 465 ILE A 109 REMARK 465 ASN A 110 REMARK 465 CYS A 111 REMARK 465 ARG A 112 REMARK 465 ASP A 113 REMARK 465 CYS A 114 REMARK 465 ASP A 215 REMARK 465 ALA A 216 REMARK 465 GLU A 217 REMARK 465 SER A 218 REMARK 465 ASP A 219 REMARK 465 GLU A 220 REMARK 465 ASP A 221 REMARK 465 GLU A 222 REMARK 465 ASP A 223 REMARK 465 ALA A 248 REMARK 465 LYS A 249 REMARK 465 GLY A 250 REMARK 465 LYS A 251 REMARK 465 LYS A 252 REMARK 465 GLY A 307 REMARK 465 GLY A 308 REMARK 465 ARG A 309 REMARK 465 LYS A 310 REMARK 465 VAL A 311 REMARK 465 GLU A 312 REMARK 465 ASN A 313 REMARK 465 GLU A 314 REMARK 465 ASP A 315 REMARK 465 MSE A 316 REMARK 465 ASN A 317 REMARK 465 LYS A 318 REMARK 465 ASP A 319 REMARK 465 GLN A 320 REMARK 465 GLY B 20 REMARK 465 SER B 21 REMARK 465 ASN B 22 REMARK 465 LEU B 23 REMARK 465 PRO B 24 REMARK 465 ASN B 25 REMARK 465 GLN B 26 REMARK 465 VAL B 27 REMARK 465 HIS B 28 REMARK 465 ARG B 29 REMARK 465 LYS B 30 REMARK 465 SER B 31 REMARK 465 VAL B 32 REMARK 465 LYS B 33 REMARK 465 LYS B 34 REMARK 465 GLY B 35 REMARK 465 ASP B 61 REMARK 465 LEU B 62 REMARK 465 TYR B 63 REMARK 465 PRO B 64 REMARK 465 GLU B 65 REMARK 465 ARG B 66 REMARK 465 VAL B 67 REMARK 465 ILE B 68 REMARK 465 SER B 69 REMARK 465 GLY B 70 REMARK 465 ALA B 71 REMARK 465 ALA B 72 REMARK 465 GLU B 73 REMARK 465 ARG B 91 REMARK 465 GLY B 92 REMARK 465 GLY B 104 REMARK 465 TYR B 105 REMARK 465 GLY B 106 REMARK 465 ASP B 107 REMARK 465 ALA B 108 REMARK 465 ILE B 109 REMARK 465 ASN B 110 REMARK 465 ALA B 216 REMARK 465 GLU B 217 REMARK 465 SER B 218 REMARK 465 ASP B 219 REMARK 465 GLU B 220 REMARK 465 ASP B 221 REMARK 465 GLU B 222 REMARK 465 ASP B 223 REMARK 465 ALA B 248 REMARK 465 LYS B 249 REMARK 465 GLY B 250 REMARK 465 LYS B 251 REMARK 465 LYS B 252 REMARK 465 GLY B 307 REMARK 465 GLY B 308 REMARK 465 ARG B 309 REMARK 465 LYS B 310 REMARK 465 VAL B 311 REMARK 465 GLU B 312 REMARK 465 ASN B 313 REMARK 465 GLU B 314 REMARK 465 ASP B 315 REMARK 465 MSE B 316 REMARK 465 ASN B 317 REMARK 465 LYS B 318 REMARK 465 ASP B 319 REMARK 465 GLN B 320 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 SER A 84 OG REMARK 470 THR A 85 OG1 CG2 REMARK 470 VAL A 86 CG1 CG2 REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 ILE A 88 CG1 CG2 CD1 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LEU A 95 CG CD1 CD2 REMARK 470 ARG A 96 CD NE CZ NH1 NH2 REMARK 470 PHE A 115 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 ARG A 128 CD NE CZ NH1 NH2 REMARK 470 HIS A 140 ND1 CD2 CE1 NE2 REMARK 470 PHE A 167 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 169 CD CE NZ REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 GLU A 193 CD OE1 OE2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 GLU A 204 CD OE1 OE2 REMARK 470 ASN A 207 CG OD1 ND2 REMARK 470 PHE A 224 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 225 CG CD CE NZ REMARK 470 GLN A 227 CG CD OE1 NE2 REMARK 470 ARG A 229 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 230 CG CD1 CD2 REMARK 470 LEU A 231 CD1 CD2 REMARK 470 GLN A 244 CG CD OE1 NE2 REMARK 470 VAL A 253 CG1 CG2 REMARK 470 GLN A 292 CG CD OE1 NE2 REMARK 470 GLU A 302 CG CD OE1 OE2 REMARK 470 ARG A 306 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 59 CG CD1 CD2 REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 ILE B 75 CG1 CG2 CD1 REMARK 470 GLU B 76 CG CD OE1 OE2 REMARK 470 ARG B 77 CG CD NE CZ NH1 NH2 REMARK 470 THR B 78 OG1 CG2 REMARK 470 VAL B 79 CG1 CG2 REMARK 470 GLN B 80 CG CD OE1 NE2 REMARK 470 ILE B 81 CG1 CG2 CD1 REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 SER B 84 OG REMARK 470 THR B 85 OG1 CG2 REMARK 470 VAL B 86 CG1 CG2 REMARK 470 GLU B 87 CG CD OE1 OE2 REMARK 470 ILE B 88 CG1 CG2 CD1 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 GLU B 90 CG CD OE1 OE2 REMARK 470 ARG B 112 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 128 CD NE CZ NH1 NH2 REMARK 470 ASN B 137 CG OD1 ND2 REMARK 470 HIS B 140 ND1 CD2 CE1 NE2 REMARK 470 HIS B 158 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 161 CE NZ REMARK 470 LYS B 190 CD CE NZ REMARK 470 GLU B 193 CD OE1 OE2 REMARK 470 ARG B 198 NE CZ NH1 NH2 REMARK 470 HIS B 212 CG ND1 CD2 CE1 NE2 REMARK 470 PHE B 224 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 225 CG CD CE NZ REMARK 470 LEU B 230 CG CD1 CD2 REMARK 470 ASN B 243 CG OD1 ND2 REMARK 470 GLN B 244 CD OE1 NE2 REMARK 470 VAL B 253 CG1 CG2 REMARK 470 GLN B 288 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 139 34.32 -71.98 REMARK 500 HIS A 140 34.86 -156.54 REMARK 500 CYS A 148 144.21 -173.21 REMARK 500 LYS A 225 -71.63 -33.05 REMARK 500 LEU B 59 56.68 70.78 REMARK 500 ARG B 139 -72.01 -44.85 REMARK 500 LEU B 294 -74.00 -96.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX B 4 DBREF 2QNR A 22 320 UNP Q15019 SEPT2_HUMAN 22 320 DBREF 2QNR B 22 320 UNP Q15019 SEPT2_HUMAN 22 320 SEQADV 2QNR GLY A 20 UNP Q15019 CLONING ARTIFACT SEQADV 2QNR SER A 21 UNP Q15019 CLONING ARTIFACT SEQADV 2QNR SER A 69 UNP Q15019 PRO 69 VARIANT SEQADV 2QNR GLY B 20 UNP Q15019 CLONING ARTIFACT SEQADV 2QNR SER B 21 UNP Q15019 CLONING ARTIFACT SEQADV 2QNR SER B 69 UNP Q15019 PRO 69 VARIANT SEQRES 1 A 301 GLY SER ASN LEU PRO ASN GLN VAL HIS ARG LYS SER VAL SEQRES 2 A 301 LYS LYS GLY PHE GLU PHE THR LEU MSE VAL VAL GLY GLU SEQRES 3 A 301 SER GLY LEU GLY LYS SER THR LEU ILE ASN SER LEU PHE SEQRES 4 A 301 LEU THR ASP LEU TYR PRO GLU ARG VAL ILE SER GLY ALA SEQRES 5 A 301 ALA GLU LYS ILE GLU ARG THR VAL GLN ILE GLU ALA SER SEQRES 6 A 301 THR VAL GLU ILE GLU GLU ARG GLY VAL LYS LEU ARG LEU SEQRES 7 A 301 THR VAL VAL ASP THR PRO GLY TYR GLY ASP ALA ILE ASN SEQRES 8 A 301 CYS ARG ASP CYS PHE LYS THR ILE ILE SER TYR ILE ASP SEQRES 9 A 301 GLU GLN PHE GLU ARG TYR LEU HIS ASP GLU SER GLY LEU SEQRES 10 A 301 ASN ARG ARG HIS ILE ILE ASP ASN ARG VAL HIS CYS CYS SEQRES 11 A 301 PHE TYR PHE ILE SER PRO PHE GLY HIS GLY LEU LYS PRO SEQRES 12 A 301 LEU ASP VAL ALA PHE MSE LYS ALA ILE HIS ASN LYS VAL SEQRES 13 A 301 ASN ILE VAL PRO VAL ILE ALA LYS ALA ASP THR LEU THR SEQRES 14 A 301 LEU LYS GLU ARG GLU ARG LEU LYS LYS ARG ILE LEU ASP SEQRES 15 A 301 GLU ILE GLU GLU HIS ASN ILE LYS ILE TYR HIS LEU PRO SEQRES 16 A 301 ASP ALA GLU SER ASP GLU ASP GLU ASP PHE LYS GLU GLN SEQRES 17 A 301 THR ARG LEU LEU LYS ALA SER ILE PRO PHE SER VAL VAL SEQRES 18 A 301 GLY SER ASN GLN LEU ILE GLU ALA LYS GLY LYS LYS VAL SEQRES 19 A 301 ARG GLY ARG LEU TYR PRO TRP GLY VAL VAL GLU VAL GLU SEQRES 20 A 301 ASN PRO GLU HIS ASN ASP PHE LEU LYS LEU ARG THR MSE SEQRES 21 A 301 LEU ILE THR HIS MSE GLN ASP LEU GLN GLU VAL THR GLN SEQRES 22 A 301 ASP LEU HIS TYR GLU ASN PHE ARG SER GLU ARG LEU LYS SEQRES 23 A 301 ARG GLY GLY ARG LYS VAL GLU ASN GLU ASP MSE ASN LYS SEQRES 24 A 301 ASP GLN SEQRES 1 B 301 GLY SER ASN LEU PRO ASN GLN VAL HIS ARG LYS SER VAL SEQRES 2 B 301 LYS LYS GLY PHE GLU PHE THR LEU MSE VAL VAL GLY GLU SEQRES 3 B 301 SER GLY LEU GLY LYS SER THR LEU ILE ASN SER LEU PHE SEQRES 4 B 301 LEU THR ASP LEU TYR PRO GLU ARG VAL ILE SER GLY ALA SEQRES 5 B 301 ALA GLU LYS ILE GLU ARG THR VAL GLN ILE GLU ALA SER SEQRES 6 B 301 THR VAL GLU ILE GLU GLU ARG GLY VAL LYS LEU ARG LEU SEQRES 7 B 301 THR VAL VAL ASP THR PRO GLY TYR GLY ASP ALA ILE ASN SEQRES 8 B 301 CYS ARG ASP CYS PHE LYS THR ILE ILE SER TYR ILE ASP SEQRES 9 B 301 GLU GLN PHE GLU ARG TYR LEU HIS ASP GLU SER GLY LEU SEQRES 10 B 301 ASN ARG ARG HIS ILE ILE ASP ASN ARG VAL HIS CYS CYS SEQRES 11 B 301 PHE TYR PHE ILE SER PRO PHE GLY HIS GLY LEU LYS PRO SEQRES 12 B 301 LEU ASP VAL ALA PHE MSE LYS ALA ILE HIS ASN LYS VAL SEQRES 13 B 301 ASN ILE VAL PRO VAL ILE ALA LYS ALA ASP THR LEU THR SEQRES 14 B 301 LEU LYS GLU ARG GLU ARG LEU LYS LYS ARG ILE LEU ASP SEQRES 15 B 301 GLU ILE GLU GLU HIS ASN ILE LYS ILE TYR HIS LEU PRO SEQRES 16 B 301 ASP ALA GLU SER ASP GLU ASP GLU ASP PHE LYS GLU GLN SEQRES 17 B 301 THR ARG LEU LEU LYS ALA SER ILE PRO PHE SER VAL VAL SEQRES 18 B 301 GLY SER ASN GLN LEU ILE GLU ALA LYS GLY LYS LYS VAL SEQRES 19 B 301 ARG GLY ARG LEU TYR PRO TRP GLY VAL VAL GLU VAL GLU SEQRES 20 B 301 ASN PRO GLU HIS ASN ASP PHE LEU LYS LEU ARG THR MSE SEQRES 21 B 301 LEU ILE THR HIS MSE GLN ASP LEU GLN GLU VAL THR GLN SEQRES 22 B 301 ASP LEU HIS TYR GLU ASN PHE ARG SER GLU ARG LEU LYS SEQRES 23 B 301 ARG GLY GLY ARG LYS VAL GLU ASN GLU ASP MSE ASN LYS SEQRES 24 B 301 ASP GLN MODRES 2QNR MSE A 41 MET SELENOMETHIONINE MODRES 2QNR MSE A 168 MET SELENOMETHIONINE MODRES 2QNR MSE A 279 MET SELENOMETHIONINE MODRES 2QNR MSE A 284 MET SELENOMETHIONINE MODRES 2QNR MSE B 41 MET SELENOMETHIONINE MODRES 2QNR MSE B 168 MET SELENOMETHIONINE MODRES 2QNR MSE B 279 MET SELENOMETHIONINE MODRES 2QNR MSE B 284 MET SELENOMETHIONINE HET MSE A 41 8 HET MSE A 168 8 HET MSE A 279 8 HET MSE A 284 8 HET MSE B 41 8 HET MSE B 168 8 HET MSE B 279 8 HET MSE B 284 8 HET GDP A1401 28 HET UNX A 1 1 HET UNX A 3 1 HET GDP B1401 28 HET UNX B 2 1 HET UNX B 4 1 HETNAM MSE SELENOMETHIONINE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 4 UNX 4(X) HELIX 1 1 GLY A 49 LEU A 59 1 11 HELIX 2 2 THR A 117 SER A 134 1 18 HELIX 3 3 LYS A 161 HIS A 172 1 12 HELIX 4 4 LYS A 183 LEU A 187 5 5 HELIX 5 5 THR A 188 HIS A 206 1 19 HELIX 6 6 PHE A 224 ALA A 233 1 10 HELIX 7 7 ASP A 272 HIS A 283 1 12 HELIX 8 8 HIS A 283 LEU A 294 1 12 HELIX 9 9 LEU A 294 ARG A 306 1 13 HELIX 10 10 GLY B 49 LEU B 59 1 11 HELIX 11 11 ARG B 77 SER B 84 1 8 HELIX 12 12 ARG B 112 GLY B 135 1 24 HELIX 13 13 LYS B 161 HIS B 172 1 12 HELIX 14 14 LYS B 183 LEU B 187 5 5 HELIX 15 15 THR B 188 ASN B 207 1 20 HELIX 16 16 LYS B 225 ILE B 235 1 11 HELIX 17 17 ASP B 272 LEU B 294 1 23 HELIX 18 18 LEU B 294 ARG B 306 1 13 SHEET 1 A 6 THR A 85 ILE A 88 0 SHEET 2 A 6 LEU A 95 THR A 102 -1 O LEU A 97 N VAL A 86 SHEET 3 A 6 PHE A 38 GLU A 45 1 N LEU A 40 O ARG A 96 SHEET 4 A 6 CYS A 148 ILE A 153 1 O CYS A 148 N MSE A 41 SHEET 5 A 6 ILE A 177 ILE A 181 1 O VAL A 180 N TYR A 151 SHEET 6 A 6 PHE A 237 SER A 238 1 O PHE A 237 N ILE A 181 SHEET 1 B 2 GLY A 255 TYR A 258 0 SHEET 2 B 2 GLY A 261 GLU A 264 -1 O GLY A 261 N TYR A 258 SHEET 1 C 6 VAL B 86 ILE B 88 0 SHEET 2 C 6 LYS B 94 THR B 102 -1 O LEU B 95 N ILE B 88 SHEET 3 C 6 GLU B 37 GLU B 45 1 N VAL B 42 O VAL B 100 SHEET 4 C 6 CYS B 148 ILE B 153 1 O PHE B 150 N MSE B 41 SHEET 5 C 6 ILE B 177 ILE B 181 1 O VAL B 178 N TYR B 151 SHEET 6 C 6 PHE B 237 SER B 238 1 O PHE B 237 N ILE B 181 SHEET 1 D 2 GLY B 255 TYR B 258 0 SHEET 2 D 2 GLY B 261 GLU B 264 -1 O VAL B 263 N ARG B 256 LINK C LEU A 40 N MSE A 41 1555 1555 1.32 LINK C MSE A 41 N VAL A 42 1555 1555 1.32 LINK C PHE A 167 N MSE A 168 1555 1555 1.32 LINK C MSE A 168 N LYS A 169 1555 1555 1.34 LINK C THR A 278 N MSE A 279 1555 1555 1.33 LINK C MSE A 279 N LEU A 280 1555 1555 1.33 LINK C HIS A 283 N MSE A 284 1555 1555 1.32 LINK C MSE A 284 N GLN A 285 1555 1555 1.33 LINK C LEU B 40 N MSE B 41 1555 1555 1.33 LINK C MSE B 41 N VAL B 42 1555 1555 1.32 LINK C PHE B 167 N MSE B 168 1555 1555 1.32 LINK C MSE B 168 N LYS B 169 1555 1555 1.33 LINK C THR B 278 N MSE B 279 1555 1555 1.33 LINK C MSE B 279 N LEU B 280 1555 1555 1.33 LINK C HIS B 283 N MSE B 284 1555 1555 1.32 LINK C MSE B 284 N GLN B 285 1555 1555 1.33 CISPEP 1 ILE A 235 PRO A 236 0 -3.52 CISPEP 2 ILE B 235 PRO B 236 0 -4.59 SITE 1 AC1 14 GLY A 47 LEU A 48 GLY A 49 LYS A 50 SITE 2 AC1 14 SER A 51 THR A 52 LYS A 183 ASP A 185 SITE 3 AC1 14 VAL A 240 GLY A 241 ARG A 256 TYR A 258 SITE 4 AC1 14 THR B 186 GLU B 191 SITE 1 AC2 15 THR A 186 GLU A 191 SER B 46 GLY B 47 SITE 2 AC2 15 LEU B 48 GLY B 49 LYS B 50 SER B 51 SITE 3 AC2 15 THR B 52 LYS B 183 ASP B 185 VAL B 240 SITE 4 AC2 15 GLY B 241 ARG B 256 TYR B 258 SITE 1 AC3 3 TYR A 258 PRO A 259 LEU B 189 SITE 1 AC4 5 VAL A 175 ASN A 176 ILE A 177 LYS A 209 SITE 2 AC4 5 TYR A 211 SITE 1 AC5 4 GLY B 44 GLU B 45 LEU B 48 PHE B 152 CRYST1 164.536 52.295 110.944 90.00 132.48 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006080 0.000000 0.005560 0.00000 SCALE2 0.000000 0.019120 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012220 0.00000