PDB Short entry for 2RAA HEADER OXIDOREDUCTASE 14-SEP-07 2RAA TITLE CRYSTAL STRUCTURE OF PYRUVATE OXIDOREDUCTASE SUBUNIT PORC (EC 1.2.7.1) TITLE 2 (TM0015) FROM THERMOTOGA MARITIMA AT 2.12 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE SYNTHASE SUBUNIT PORC; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PYRUVATE OXIDOREDUCTASE GAMMA CHAIN, POR, PYRUVIC-FERREDOXIN COMPND 5 OXIDOREDUCTASE SUBUNIT GAMMA; COMPND 6 EC: 1.2.7.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA MSB8; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8, DSM 3109, JCM 10099; SOURCE 5 ATCC: 43589; SOURCE 6 GENE: TM0015, PORC, PORG; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS TM0015, PYRUVATE OXIDOREDUCTASE SUBUNIT PORC (EC 1.2.7.1), STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-2, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-JAN-23 2RAA 1 REMARK SEQADV REVDAT 5 24-JUL-19 2RAA 1 REMARK LINK REVDAT 4 25-OCT-17 2RAA 1 REMARK REVDAT 3 13-JUL-11 2RAA 1 VERSN REVDAT 2 24-FEB-09 2RAA 1 VERSN REVDAT 1 02-OCT-07 2RAA 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PYRUVATE OXIDOREDUCTASE SUBUNIT PORC JRNL TITL 2 (EC 1.2.7.1) (TM0015) FROM THERMOTOGA MARITIMA AT 2.12 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 14517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 699 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.12 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 964 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1349 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 56.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.79000 REMARK 3 B22 (A**2) : 1.79000 REMARK 3 B33 (A**2) : -3.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.193 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.172 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.077 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1402 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 955 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1898 ; 1.690 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2322 ; 0.971 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 180 ; 5.093 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 63 ;35.026 ;23.810 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 236 ;16.360 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.475 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 214 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1563 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 284 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 298 ; 0.229 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 972 ; 0.203 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 675 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 773 ; 0.095 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 36 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.135 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 21 ; 0.220 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.157 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 929 ; 2.409 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 365 ; 0.515 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1422 ; 3.537 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 547 ; 5.965 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 473 ; 8.748 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): 12.2125 18.0783 57.1044 REMARK 3 T TENSOR REMARK 3 T11: -0.2013 T22: 0.0018 REMARK 3 T33: -0.0102 T12: 0.0181 REMARK 3 T13: 0.0250 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.9677 L22: 2.2797 REMARK 3 L33: 4.4504 L12: 1.1244 REMARK 3 L13: 1.9650 L23: 1.9853 REMARK 3 S TENSOR REMARK 3 S11: 0.0767 S12: 0.3603 S13: -0.1098 REMARK 3 S21: 0.0063 S22: 0.1760 S23: 0.0019 REMARK 3 S31: -0.1645 S32: 0.1088 S33: -0.2527 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 4. SO4 IONS FROM THE CRYSTALLIZATION SOLUTION ARE MODELED. REMARK 3 5. THE FOLLOWING LOOPS HAVE POOR OR NO DENSITY: 5-7, 43-50, REMARK 3 62-69, 165-169. THUS, THE MODEL IN THESE REGIONS IS NOT REMARK 3 RELIABLE. N-TERMINUS AS WELL AS PURIFICATION TAG ARE REMARK 3 DISORDERED. REMARK 3 6. A FEW NON-WATER DENSITY BLOBS OUTSIDE THE PROTEIN REMARK 3 ARE LEFT UNINTERPRETED. REMARK 4 REMARK 4 2RAA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044621. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-AUG-07; 03-JUN-07 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 4.0; 3.93 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; SSRL REMARK 200 BEAMLINE : 8.2.2; BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 0.91837, 0.97925, REMARK 200 0.97895 REMARK 200 MONOCHROMATOR : KOHZU: DOUBLE CRYSTAL SI(111); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : NULL; FLAT MIRROR (VERTICAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; MARMOSAIC 325 REMARK 200 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14544 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 45.175 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: TWO CRYSTALS WERE USED FOR THE SOLUTION OF THIS STRUCTURE. REMARK 200 A 2.35 ANGSTROM MAD DATA COLLECTED FROM ONE CRYSTAL WAS USED TO REMARK 200 PHASE AND TRACE AN INITIAL MODEL. THE MODEL WAS THEN REFINED REMARK 200 USING THE AMPLITUDES FROM A SECOND CRYSTAL THAT DIFFRACTED TO REMARK 200 2.12 ANGSTROM. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.8M AMMONIUM SULFATE, 0.1M REMARK 280 CITRATE PH 4.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K. REMARK 280 NANODROP, 0.86M AMMONIUM SULFATE, 0.1M CITRATE PH 3.93, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.57550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.62600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.62600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.78775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.62600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.62600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.36325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.62600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.62600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.78775 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.62600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.62600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.36325 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.57550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 VAL A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 47 REMARK 465 TYR A 63 REMARK 465 ILE A 64 REMARK 465 ARG A 65 REMARK 465 VAL A 66 REMARK 465 ARG A 67 REMARK 465 SER A 68 REMARK 465 GLY A 166 REMARK 465 LYS A 167 REMARK 465 LYS A 168 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 LYS A 21 CE NZ REMARK 470 LYS A 36 CE NZ REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 70 CG1 CG2 REMARK 470 LYS A 111 CD CE NZ REMARK 470 GLU A 155 CD OE1 OE2 REMARK 470 LYS A 159 CD CE NZ REMARK 470 LYS A 163 CD CE NZ REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 194 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 281896 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHH FOLLOWED BY THE TARGET SEQUENCE. DBREF 2RAA A 1 192 UNP O05650 PORC_THEMA 1 192 SEQADV 2RAA MSE A -11 UNP O05650 EXPRESSION TAG SEQADV 2RAA GLY A -10 UNP O05650 EXPRESSION TAG SEQADV 2RAA SER A -9 UNP O05650 EXPRESSION TAG SEQADV 2RAA ASP A -8 UNP O05650 EXPRESSION TAG SEQADV 2RAA LYS A -7 UNP O05650 EXPRESSION TAG SEQADV 2RAA ILE A -6 UNP O05650 EXPRESSION TAG SEQADV 2RAA HIS A -5 UNP O05650 EXPRESSION TAG SEQADV 2RAA HIS A -4 UNP O05650 EXPRESSION TAG SEQADV 2RAA HIS A -3 UNP O05650 EXPRESSION TAG SEQADV 2RAA HIS A -2 UNP O05650 EXPRESSION TAG SEQADV 2RAA HIS A -1 UNP O05650 EXPRESSION TAG SEQADV 2RAA HIS A 0 UNP O05650 EXPRESSION TAG SEQRES 1 A 204 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 204 PRO VAL ALA LYS LYS TYR PHE GLU ILE ARG TRP HIS GLY SEQRES 3 A 204 ARG ALA GLY GLN GLY ALA LYS SER ALA SER GLN MSE LEU SEQRES 4 A 204 ALA GLU ALA ALA LEU GLU ALA GLY LYS TYR VAL GLN ALA SEQRES 5 A 204 PHE PRO GLU TYR GLY ALA GLU ARG THR GLY ALA PRO MSE SEQRES 6 A 204 ARG ALA PHE ASN ARG ILE GLY ASP GLU TYR ILE ARG VAL SEQRES 7 A 204 ARG SER ALA VAL GLU ASN PRO ASP VAL VAL VAL VAL ILE SEQRES 8 A 204 ASP GLU THR LEU LEU SER PRO ALA ILE VAL GLU GLY LEU SEQRES 9 A 204 SER GLU ASP GLY ILE LEU LEU VAL ASN THR VAL LYS ASP SEQRES 10 A 204 PHE GLU PHE VAL ARG LYS LYS THR GLY PHE ASN GLY LYS SEQRES 11 A 204 ILE CYS VAL VAL ASP ALA THR ASP ILE ALA LEU GLN GLU SEQRES 12 A 204 ILE LYS ARG GLY ILE PRO ASN THR PRO MSE LEU GLY ALA SEQRES 13 A 204 LEU VAL ARG VAL THR GLY ILE VAL PRO LEU GLU ALA ILE SEQRES 14 A 204 GLU LYS ARG ILE GLU LYS MSE PHE GLY LYS LYS PHE PRO SEQRES 15 A 204 GLN GLU VAL ILE ASP ALA ASN LYS ARG ALA LEU ARG ARG SEQRES 16 A 204 GLY TYR GLU GLU VAL LYS CYS SER GLU MODRES 2RAA MSE A 26 MET SELENOMETHIONINE MODRES 2RAA MSE A 53 MET SELENOMETHIONINE MODRES 2RAA MSE A 141 MET SELENOMETHIONINE MODRES 2RAA MSE A 164 MET SELENOMETHIONINE HET MSE A 26 8 HET MSE A 53 8 HET MSE A 141 8 HET MSE A 164 13 HET SO4 A 193 5 HET SO4 A 194 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *27(H2 O) HELIX 1 1 GLY A 19 ALA A 34 1 16 HELIX 2 2 ASP A 80 LEU A 84 5 5 HELIX 3 3 SER A 85 GLU A 90 5 6 HELIX 4 4 ASP A 105 GLY A 114 1 10 HELIX 5 5 ASP A 123 ILE A 132 1 10 HELIX 6 6 PRO A 137 GLY A 150 1 14 HELIX 7 7 PRO A 153 PHE A 165 1 13 HELIX 8 8 PRO A 170 VAL A 188 1 19 SHEET 1 A 7 VAL A 38 GLU A 43 0 SHEET 2 A 7 PRO A 52 GLY A 60 -1 O ARG A 58 N GLN A 39 SHEET 3 A 7 TYR A 7 ARG A 15 -1 N PHE A 8 O ILE A 59 SHEET 4 A 7 VAL A 75 VAL A 78 1 O VAL A 77 N HIS A 13 SHEET 5 A 7 ILE A 97 ASN A 101 1 O LEU A 99 N VAL A 76 SHEET 6 A 7 LYS A 118 VAL A 122 1 O CYS A 120 N LEU A 98 SHEET 7 A 7 LYS A 189 CYS A 190 -1 O LYS A 189 N VAL A 121 SSBOND 1 CYS A 120 CYS A 190 1555 1555 2.68 LINK C GLN A 25 N MSE A 26 1555 1555 1.32 LINK C MSE A 26 N LEU A 27 1555 1555 1.33 LINK C PRO A 52 N MSE A 53 1555 1555 1.33 LINK C MSE A 53 N ARG A 54 1555 1555 1.34 LINK C PRO A 140 N MSE A 141 1555 1555 1.33 LINK C MSE A 141 N LEU A 142 1555 1555 1.32 LINK C LYS A 163 N MSE A 164 1555 1555 1.33 LINK C MSE A 164 N PHE A 165 1555 1555 1.34 SITE 1 AC1 8 GLY A 17 GLN A 18 GLY A 19 ALA A 20 SITE 2 AC1 8 LYS A 21 TYR A 44 MSE A 53 HOH A 219 SITE 1 AC2 7 TYR A 7 GLU A 9 ARG A 58 ALA A 69 SITE 2 AC2 7 VAL A 70 GLU A 71 ASN A 72 CRYST1 57.252 57.252 147.151 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006796 0.00000