PDB Short entry for 2RH8 HEADER OXIDOREDUCTASE 08-OCT-07 2RH8 TITLE STRUCTURE OF APO ANTHOCYANIDIN REDUCTASE FROM VITIS VINIFERA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTHOCYANIDIN REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.1.77; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VITIS VINIFERA; SOURCE 3 ORGANISM_COMMON: GRAPE; SOURCE 4 ORGANISM_TAXID: 29760; SOURCE 5 GENE: VVANR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETGB-1 KEYWDS FLAVONOIDS, ROSSMANN FOLD, SHORT CHAIN DEHYDROGENASE/REDUCTASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GARGOURI,C.MAUGE,B.LANGLOIS D'ESTAINTOT,T.GRANIER,C.MANIGAN, AUTHOR 2 B.GALLOIS REVDAT 4 30-AUG-23 2RH8 1 REMARK REVDAT 3 01-SEP-09 2RH8 1 JRNL REVDAT 2 24-FEB-09 2RH8 1 VERSN REVDAT 1 18-NOV-08 2RH8 0 JRNL AUTH M.GARGOURI,C.MANIGAND,C.MAUGE,T.GRANIER, JRNL AUTH 2 B.LANGLOIS D'ESTAINTOT,O.CALA,I.PIANET,K.BATHANY, JRNL AUTH 3 J.CHAUDIERE,B.GALLOIS JRNL TITL STRUCTURE AND EPIMERASE ACTIVITY OF ANTHOCYANIDIN REDUCTASE JRNL TITL 2 FROM VITIS VINIFERA. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 65 989 2009 JRNL REFN ISSN 0907-4449 JRNL PMID 19690377 JRNL DOI 10.1107/S0907444909025013 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 17114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 851 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1189 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2309 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.88000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -1.32000 REMARK 3 B12 (A**2) : 0.44000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.279 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.162 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.271 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2354 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1522 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3200 ; 2.068 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3761 ; 1.229 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 309 ; 5.765 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 80 ;31.824 ;25.125 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 379 ;14.543 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;19.970 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 385 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2605 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 444 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 499 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1488 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1187 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1224 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 127 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 4 ; 0.118 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 28 ; 0.175 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.345 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1608 ; 3.210 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 630 ; 0.695 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2491 ; 4.565 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 870 ; 4.303 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 709 ; 5.915 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2RH8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934000 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17253 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 43.727 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : 0.08700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.34300 REMARK 200 R SYM FOR SHELL (I) : 0.34300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2C29 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NH4 ACETATE 150 MM, PEG 3350, HEPES REMARK 280 100 MM, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, REMARK 280 PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 146.80200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 293.60400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 220.20300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 367.00500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.40100 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 146.80200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 293.60400 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 367.00500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 220.20300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 73.40100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 352 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLN A 4 REMARK 465 HIS A 5 REMARK 465 PRO A 6 REMARK 465 ILE A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 94 REMARK 465 SER A 95 REMARK 465 GLU A 96 REMARK 465 ASP A 97 REMARK 465 PRO A 98 REMARK 465 GLU A 99 REMARK 465 ASN A 100 REMARK 465 ASP A 101 REMARK 465 MET A 102 REMARK 465 GLU A 156 REMARK 465 PHE A 157 REMARK 465 LEU A 158 REMARK 465 THR A 159 REMARK 465 SER A 160 REMARK 465 ALA A 161 REMARK 465 LYS A 162 REMARK 465 GLN A 337 REMARK 465 ASN A 338 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 41 CD NE CZ NH1 NH2 REMARK 470 GLN A 46 CG CD OE1 NE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 48 CD CE NZ REMARK 470 GLU A 57 CD OE1 OE2 REMARK 470 ARG A 65 CD NE CZ NH1 NH2 REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 ILE A 103 CG1 CG2 CD1 REMARK 470 LYS A 104 CE NZ REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 THR A 165 OG1 CG2 REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 GLU A 184 OE1 OE2 REMARK 470 ASN A 187 OD1 ND2 REMARK 470 ARG A 248 CZ NH1 NH2 REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 SER A 280 OG REMARK 470 LYS A 281 NZ REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 ASP A 294 OD1 OD2 REMARK 470 LYS A 298 CD CE NZ REMARK 470 LYS A 300 CD CE NZ REMARK 470 LYS A 316 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 45 93.03 -63.00 REMARK 500 GLU A 71 24.36 82.74 REMARK 500 LEU A 72 -11.08 -146.28 REMARK 500 ASP A 141 58.71 -97.48 REMARK 500 THR A 153 -57.03 -120.34 REMARK 500 ASP A 154 83.95 -68.92 REMARK 500 THR A 196 -145.88 -120.10 REMARK 500 LEU A 197 108.08 -56.06 REMARK 500 ASN A 221 93.30 -68.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 462 DBREF 2RH8 A 1 338 UNP Q5FB34 Q5FB34_VITVI 1 338 SEQRES 1 A 338 MET ALA THR GLN HIS PRO ILE GLY LYS LYS THR ALA CYS SEQRES 2 A 338 VAL VAL GLY GLY THR GLY PHE VAL ALA SER LEU LEU VAL SEQRES 3 A 338 LYS LEU LEU LEU GLN LYS GLY TYR ALA VAL ASN THR THR SEQRES 4 A 338 VAL ARG ASP PRO ASP ASN GLN LYS LYS VAL SER HIS LEU SEQRES 5 A 338 LEU GLU LEU GLN GLU LEU GLY ASP LEU LYS ILE PHE ARG SEQRES 6 A 338 ALA ASP LEU THR ASP GLU LEU SER PHE GLU ALA PRO ILE SEQRES 7 A 338 ALA GLY CYS ASP PHE VAL PHE HIS VAL ALA THR PRO VAL SEQRES 8 A 338 HIS PHE ALA SER GLU ASP PRO GLU ASN ASP MET ILE LYS SEQRES 9 A 338 PRO ALA ILE GLN GLY VAL VAL ASN VAL MET LYS ALA CYS SEQRES 10 A 338 THR ARG ALA LYS SER VAL LYS ARG VAL ILE LEU THR SER SEQRES 11 A 338 SER ALA ALA ALA VAL THR ILE ASN GLN LEU ASP GLY THR SEQRES 12 A 338 GLY LEU VAL VAL ASP GLU LYS ASN TRP THR ASP ILE GLU SEQRES 13 A 338 PHE LEU THR SER ALA LYS PRO PRO THR TRP GLY TYR PRO SEQRES 14 A 338 ALA SER LYS THR LEU ALA GLU LYS ALA ALA TRP LYS PHE SEQRES 15 A 338 ALA GLU GLU ASN ASN ILE ASP LEU ILE THR VAL ILE PRO SEQRES 16 A 338 THR LEU MET ALA GLY SER SER LEU THR SER ASP VAL PRO SEQRES 17 A 338 SER SER ILE GLY LEU ALA MET SER LEU ILE THR GLY ASN SEQRES 18 A 338 GLU PHE LEU ILE ASN GLY MET LYS GLY MET GLN MET LEU SEQRES 19 A 338 SER GLY SER VAL SER ILE ALA HIS VAL GLU ASP VAL CYS SEQRES 20 A 338 ARG ALA HIS ILE PHE VAL ALA GLU LYS GLU SER ALA SER SEQRES 21 A 338 GLY ARG TYR ILE CYS CYS ALA ALA ASN THR SER VAL PRO SEQRES 22 A 338 GLU LEU ALA LYS PHE LEU SER LYS ARG TYR PRO GLN TYR SEQRES 23 A 338 LYS VAL PRO THR ASP PHE GLY ASP PHE PRO PRO LYS SER SEQRES 24 A 338 LYS LEU ILE ILE SER SER GLU LYS LEU VAL LYS GLU GLY SEQRES 25 A 338 PHE SER PHE LYS TYR GLY ILE GLU GLU ILE TYR ASP GLU SEQRES 26 A 338 SER VAL GLU TYR PHE LYS ALA LYS GLY LEU LEU GLN ASN HET CL A 462 1 HETNAM CL CHLORIDE ION FORMUL 2 CL CL 1- FORMUL 3 HOH *123(H2 O) HELIX 1 1 GLY A 19 LYS A 32 1 14 HELIX 2 2 VAL A 49 GLN A 56 1 8 HELIX 3 3 GLU A 57 GLY A 59 5 3 HELIX 4 4 PHE A 74 ALA A 79 1 6 HELIX 5 5 ILE A 103 ALA A 120 1 18 HELIX 6 6 SER A 131 ASP A 141 1 11 HELIX 7 7 THR A 173 ASN A 187 1 15 HELIX 8 8 PRO A 208 GLY A 220 1 13 HELIX 9 9 ASN A 221 GLY A 236 1 16 HELIX 10 10 VAL A 243 LYS A 256 1 14 HELIX 11 11 SER A 271 TYR A 283 1 13 HELIX 12 12 SER A 305 GLY A 312 1 8 HELIX 13 13 GLY A 318 LYS A 333 1 16 SHEET 1 A 7 LEU A 61 ARG A 65 0 SHEET 2 A 7 ALA A 35 VAL A 40 1 N THR A 38 O PHE A 64 SHEET 3 A 7 THR A 11 VAL A 15 1 N VAL A 14 O ASN A 37 SHEET 4 A 7 PHE A 83 VAL A 87 1 O PHE A 83 N CYS A 13 SHEET 5 A 7 ARG A 125 THR A 129 1 O ILE A 127 N VAL A 84 SHEET 6 A 7 LEU A 190 PRO A 195 1 O ILE A 191 N LEU A 128 SHEET 7 A 7 GLY A 261 CYS A 265 1 O TYR A 263 N ILE A 194 SHEET 1 B 3 LEU A 197 ALA A 199 0 SHEET 2 B 3 VAL A 238 HIS A 242 1 O ALA A 241 N ALA A 199 SHEET 3 B 3 ALA A 268 THR A 270 -1 O ALA A 268 N ILE A 240 SITE 1 AC1 4 VAL A 21 PRO A 90 VAL A 91 HOH A 396 CRYST1 50.470 50.470 440.406 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019814 0.011439 0.000000 0.00000 SCALE2 0.000000 0.022879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002271 0.00000