PDB Short entry for 2RQ1 HEADER MEMBRANE PROTEIN 09-JAN-09 2RQ1 TITLE SOLUTION STRUCTURE OF THE 4.1R FERM ALPHA LOBE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN 4.1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: 4.1R_FERM_ALPHA-LOBE_DOMAIN, UNP RESIDUES 292-396; COMPND 5 SYNONYM: BAND 4.1, P4.1, EPB4.1, 4.1R; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EPB41, E41P; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PROTEIN, MEMBRANE PROTEIN, ACTIN-BINDING, ALTERNATIVE SPLICING, KEYWDS 2 CYTOPLASM, CYTOSKELETON, ELLIPTOCYTOSIS, GLYCOPROTEIN, HEREDITARY KEYWDS 3 HEMOLYTIC ANEMIA, NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, KEYWDS 4 PYROPOIKILOCYTOSIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.KUSUNOKI,T.KOHNO REVDAT 3 16-MAR-22 2RQ1 1 REMARK SEQADV REVDAT 2 19-MAY-09 2RQ1 1 JRNL REVDAT 1 14-APR-09 2RQ1 0 JRNL AUTH H.KUSUNOKI,T.KOHNO JRNL TITL SOLUTION STRUCTURE AND GLYCOPHORIN C BINDING STUDIES OF THE JRNL TITL 2 PROTEIN 4.1R FERM ALPHA-LOBE DOMAIN JRNL REF PROTEINS V. 76 255 2009 JRNL REFN ISSN 0887-3585 JRNL PMID 19338061 JRNL DOI 10.1002/PROT.22405 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES, READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000150147. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 45 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.12-0.8MM 4.1R FERM ALPHA-LOBE REMARK 210 DOMAIN-1, 0.12-0.8MM [U-98% 15N] REMARK 210 4.1R FERM ALPHA-LOBE DOMAIN-2, REMARK 210 0.12-0.8MM [U-98% 13C; U-98% 15N] REMARK 210 4.1R FERM ALPHA-LOBE DOMAIN-3, REMARK 210 90% H2O/10% D2O OR 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 2D 1H-15N HSQC; REMARK 210 2D 1H-13C HSQC; 2D 1H-1H TOCSY; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 H(CCO)NH; 3D HCCH-TOCSY; 3D HNHA; REMARK 210 3D HNHB; 3D HN(CO)CA; 3D HN(CA) REMARK 210 CO REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, TOPSPIN, SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 80 112.93 61.13 REMARK 500 1 GLN A 86 47.32 -90.65 REMARK 500 1 HIS A 136 176.87 61.99 REMARK 500 1 VAL A 138 -67.70 67.12 REMARK 500 1 ASP A 139 30.17 -97.18 REMARK 500 1 ASN A 149 70.86 -106.57 REMARK 500 1 ARG A 166 -154.58 -65.61 REMARK 500 1 SER A 167 73.11 -66.86 REMARK 500 2 HIS A 81 52.13 -90.31 REMARK 500 2 HIS A 136 -80.24 -114.43 REMARK 500 2 VAL A 138 -34.69 -139.83 REMARK 500 2 ASN A 149 65.89 -107.75 REMARK 500 2 ARG A 166 -159.92 -64.80 REMARK 500 2 SER A 167 72.88 -66.80 REMARK 500 2 SER A 185 79.33 61.85 REMARK 500 3 SER A 80 -64.92 69.74 REMARK 500 3 HIS A 81 45.75 -91.64 REMARK 500 3 MET A 82 129.45 -177.06 REMARK 500 3 HIS A 136 -77.39 -118.91 REMARK 500 3 ASP A 139 32.86 -96.41 REMARK 500 3 ASN A 149 65.84 -115.39 REMARK 500 3 ARG A 166 -161.31 -65.47 REMARK 500 3 SER A 167 72.87 -67.31 REMARK 500 4 ASP A 139 30.80 -99.12 REMARK 500 4 ASN A 149 66.94 -112.93 REMARK 500 5 SER A 80 -48.41 -141.94 REMARK 500 5 HIS A 136 176.00 60.26 REMARK 500 5 VAL A 138 -65.82 68.38 REMARK 500 5 ASP A 139 40.91 -93.87 REMARK 500 5 ARG A 166 -156.84 -65.35 REMARK 500 5 SER A 167 72.47 -66.79 REMARK 500 6 ASN A 149 69.56 -105.58 REMARK 500 6 ARG A 166 -163.01 -63.51 REMARK 500 6 SER A 167 72.97 -67.57 REMARK 500 6 SER A 185 74.21 65.25 REMARK 500 7 SER A 80 -179.16 60.43 REMARK 500 7 HIS A 81 -69.82 67.56 REMARK 500 7 GLN A 86 32.12 -98.15 REMARK 500 7 HIS A 136 -83.32 -130.14 REMARK 500 7 ASN A 149 68.91 -104.07 REMARK 500 8 HIS A 81 31.16 -154.14 REMARK 500 8 GLN A 86 66.33 62.21 REMARK 500 8 TYR A 131 97.91 -66.86 REMARK 500 8 ASN A 149 70.42 -108.61 REMARK 500 8 SER A 167 44.23 82.84 REMARK 500 9 ALA A 85 -67.05 -102.87 REMARK 500 9 ASN A 149 71.37 -103.08 REMARK 500 9 ARG A 166 -161.36 -63.86 REMARK 500 9 SER A 167 72.47 -67.18 REMARK 500 9 SER A 185 71.32 63.57 REMARK 500 REMARK 500 THIS ENTRY HAS 102 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GG3 RELATED DB: PDB DBREF 2RQ1 A 83 187 UNP P11171 41_HUMAN 292 396 SEQADV 2RQ1 GLY A 79 UNP P11171 EXPRESSION TAG SEQADV 2RQ1 SER A 80 UNP P11171 EXPRESSION TAG SEQADV 2RQ1 HIS A 81 UNP P11171 EXPRESSION TAG SEQADV 2RQ1 MET A 82 UNP P11171 EXPRESSION TAG SEQRES 1 A 109 GLY SER HIS MET ASP PRO ALA GLN LEU THR GLU ASP ILE SEQRES 2 A 109 THR ARG TYR TYR LEU CYS LEU GLN LEU ARG GLN ASP ILE SEQRES 3 A 109 VAL ALA GLY ARG LEU PRO CYS SER PHE ALA THR LEU ALA SEQRES 4 A 109 LEU LEU GLY SER TYR THR ILE GLN SER GLU LEU GLY ASP SEQRES 5 A 109 TYR ASP PRO GLU LEU HIS GLY VAL ASP TYR VAL SER ASP SEQRES 6 A 109 PHE LYS LEU ALA PRO ASN GLN THR LYS GLU LEU GLU GLU SEQRES 7 A 109 LYS VAL MET GLU LEU HIS LYS SER TYR ARG SER MET THR SEQRES 8 A 109 PRO ALA GLN ALA ASP LEU GLU PHE LEU GLU ASN ALA LYS SEQRES 9 A 109 LYS LEU SER MET TYR HELIX 1 1 LEU A 87 ALA A 106 1 20 HELIX 2 2 SER A 112 GLY A 129 1 18 HELIX 3 3 ASP A 139 PHE A 144 5 6 HELIX 4 4 THR A 151 TYR A 165 1 15 HELIX 5 5 THR A 169 SER A 185 1 17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000