PDB Short entry for 2V4Z HEADER CELL CYCLE 30-SEP-08 2V4Z TITLE THE CRYSTAL STRUCTURE OF THE HUMAN G-PROTEIN SUBUNIT ALPHA (GNAI3) IN TITLE 2 COMPLEX WITH AN ENGINEERED REGULATOR OF G-PROTEIN SIGNALING TYPE 2 TITLE 3 DOMAIN (RGS2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(K) SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SUBUNIT ALPHA, RESIDUES 4-350; COMPND 5 SYNONYM: G(I) ALPHA-3, GUANINE NUCLEOTIDE-BINDING PROTEIN G K SUBUNIT COMPND 6 ALPHA G I ALPHA-3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: REGULATOR OF G-PROTEIN SIGNALING 2; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: RGS DOMAIN, RESIDUES 71-209; COMPND 12 SYNONYM: G0/G1 SWITCH REGULATORY PROTEIN 8, RGS2, CELL GROWTH- COMPND 13 INHIBITING GENE 31 PROTEIN; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET-LIC KEYWDS GTP HYDROLYSIS, ADP-RIBOSYLATION, NUCLEOTIDE-BINDING, LIPOPROTEIN, KEYWDS 2 GTP-BINDING, PHOSPHOPROTEIN, SIGNAL TRANSDUCTION INHIBITOR, GUANINE KEYWDS 3 NUCLEOTIDE BINDING PROTEIN, TRANSMEMBRANE SIGNALING, G-PROTEIN KEYWDS 4 COUPLED RECEPTOR, PALMITATE, MYRISTATE, TRANSDUCER, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.ROOS,M.SOUNDARARAJAN,A.C.W.PIKE,C.H.ARROWSMITH,J.WEIGELT, AUTHOR 2 A.EDWARDS,C.BOUNTRA,S.KNAPP REVDAT 8 13-DEC-23 2V4Z 1 REMARK LINK REVDAT 7 04-APR-18 2V4Z 1 REMARK REVDAT 6 13-JUL-11 2V4Z 1 VERSN REVDAT 5 21-JUL-09 2V4Z 1 JRNL REVDAT 4 09-JUN-09 2V4Z 1 JRNL REVDAT 3 26-MAY-09 2V4Z 1 REMARK REVDAT 2 24-FEB-09 2V4Z 1 VERSN REVDAT 1 04-NOV-08 2V4Z 0 JRNL AUTH A.J.KIMPLE,M.SOUNDARARAJAN,S.Q.HUTSELL,A.K.ROOS,D.J.URBAN, JRNL AUTH 2 V.SETOLA,B.R.TEMPLE,B.L.ROTH,S.KNAPP,F.S.WILLARD, JRNL AUTH 3 D.P.SIDEROVSKI JRNL TITL STRUCTURAL DETERMINANTS OF G-PROTEIN ALPHA SUBUNIT JRNL TITL 2 SELECTIVITY BY REGULATOR OF G-PROTEIN SIGNALING 2(RGS2). JRNL REF J.BIOL.CHEM. V. 284 19402 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19478087 JRNL DOI 10.1074/JBC.M109.024711 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 959 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1307 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3396 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 67.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.56000 REMARK 3 B22 (A**2) : 0.56000 REMARK 3 B33 (A**2) : -0.84000 REMARK 3 B12 (A**2) : 0.28000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.540 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.317 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.247 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.265 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3495 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2285 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4740 ; 0.973 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5553 ; 0.786 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 434 ; 4.750 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;34.158 ;24.417 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 561 ;13.464 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.737 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3923 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 746 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2177 ; 0.268 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3478 ; 0.521 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1318 ; 0.740 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1262 ; 1.288 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 347 REMARK 3 RESIDUE RANGE : A 1348 A 1348 REMARK 3 RESIDUE RANGE : A 1349 A 1349 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7624 45.7584 -9.8955 REMARK 3 T TENSOR REMARK 3 T11: -0.3001 T22: -0.2277 REMARK 3 T33: -0.3305 T12: -0.0007 REMARK 3 T13: -0.0515 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 4.3147 L22: 2.5912 REMARK 3 L33: 3.0780 L12: 0.4059 REMARK 3 L13: -0.7445 L23: -0.0223 REMARK 3 S TENSOR REMARK 3 S11: 0.0873 S12: -0.1791 S13: -0.2075 REMARK 3 S21: -0.0661 S22: -0.1899 S23: -0.2548 REMARK 3 S31: -0.0586 S32: 0.2074 S33: 0.1026 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 72 B 199 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8393 36.1297 11.9945 REMARK 3 T TENSOR REMARK 3 T11: 0.2355 T22: 0.2366 REMARK 3 T33: 0.0106 T12: 0.0580 REMARK 3 T13: 0.0820 T23: 0.2539 REMARK 3 L TENSOR REMARK 3 L11: 4.8342 L22: 5.2818 REMARK 3 L33: 7.4831 L12: -1.4769 REMARK 3 L13: -2.2016 L23: -1.9840 REMARK 3 S TENSOR REMARK 3 S11: -0.1026 S12: -0.8716 S13: -0.3195 REMARK 3 S21: 1.6898 S22: 0.1682 S23: 0.7053 REMARK 3 S31: 0.1643 S32: 0.1155 S33: -0.0655 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2V4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1290037689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18916 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 35.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2IHB REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 2 M AMMONIUM REMARK 280 SULPHATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.22000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.11000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 33.11000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 66.22000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN B, CYS 106 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ASN 184 TO ASP REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 191 TO LYS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 MET A 3 REMARK 465 THR A 4 REMARK 465 LEU A 5 REMARK 465 SER A 6 REMARK 465 ALA A 7 REMARK 465 GLU A 8 REMARK 465 ASP A 9 REMARK 465 LYS A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 VAL A 13 REMARK 465 GLU A 14 REMARK 465 ARG A 15 REMARK 465 SER A 16 REMARK 465 LYS A 17 REMARK 465 MET A 18 REMARK 465 ILE A 19 REMARK 465 ASP A 20 REMARK 465 ARG A 21 REMARK 465 ASN A 22 REMARK 465 LEU A 23 REMARK 465 ARG A 24 REMARK 465 GLU A 25 REMARK 465 ASP A 26 REMARK 465 GLY A 27 REMARK 465 GLU A 28 REMARK 465 LYS A 29 REMARK 465 ALA A 30 REMARK 465 ALA A 31 REMARK 465 LEU A 348 REMARK 465 LYS A 349 REMARK 465 GLU A 350 REMARK 465 SER A 351 REMARK 465 SER B 68 REMARK 465 ASN B 69 REMARK 465 ALA B 70 REMARK 465 LYS B 71 REMARK 465 LYS B 121 REMARK 465 THR B 122 REMARK 465 LYS B 123 REMARK 465 ILE B 162 REMARK 465 GLN B 163 REMARK 465 GLU B 164 REMARK 465 LYS B 200 REMARK 465 LYS B 201 REMARK 465 PRO B 202 REMARK 465 GLN B 203 REMARK 465 ILE B 204 REMARK 465 THR B 205 REMARK 465 THR B 206 REMARK 465 GLU B 207 REMARK 465 PRO B 208 REMARK 465 HIS B 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 32 CD CE NZ REMARK 470 ASP A 59 CG OD1 OD2 REMARK 470 LYS A 92 CE NZ REMARK 470 LYS A 128 CD CE NZ REMARK 470 ARG A 132 CD NE CZ NH1 NH2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 LYS A 248 NZ REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 ARG A 313 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 314 CD CE NZ REMARK 470 LYS A 330 CD CE NZ REMARK 470 LYS A 345 CD CE NZ REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 GLU B 76 CG CD OE1 OE2 REMARK 470 GLN B 78 CG CD OE1 NE2 REMARK 470 LEU B 79 CG CD1 CD2 REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 TYR B 92 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 102 CE NZ REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 GLN B 126 CG CD OE1 NE2 REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 LEU B 128 CG CD1 CD2 REMARK 470 SER B 129 OG REMARK 470 SER B 130 OG REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 ARG B 133 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 ILE B 135 CG1 CG2 CD1 REMARK 470 GLU B 141 CG CD OE1 OE2 REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 LYS B 146 CD CE NZ REMARK 470 GLN B 153 CG CD OE1 NE2 REMARK 470 LYS B 155 CE NZ REMARK 470 LEU B 157 CG CD1 CD2 REMARK 470 ILE B 158 CG1 CG2 CD1 REMARK 470 GLN B 160 CG CD OE1 NE2 REMARK 470 ASN B 161 CG OD1 ND2 REMARK 470 LYS B 191 CE NZ REMARK 470 GLU B 193 CG CD OE1 OE2 REMARK 470 PHE B 194 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 196 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 58 54.56 -149.06 REMARK 500 ASP A 59 27.05 43.42 REMARK 500 LYS A 92 64.44 61.16 REMARK 500 SER A 113 -70.31 -89.12 REMARK 500 ALA A 114 99.18 -50.73 REMARK 500 GLU A 116 138.92 -34.41 REMARK 500 ASN A 294 63.71 -100.19 REMARK 500 SER B 73 -66.62 -160.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1350 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 47 OG REMARK 620 2 THR A 181 OG1 79.8 REMARK 620 3 GDP A1348 O3B 92.4 170.1 REMARK 620 4 ALF A1349 F2 150.3 92.3 97.4 REMARK 620 5 ALF A1349 F4 145.2 81.3 102.3 59.1 REMARK 620 6 HOH A2002 O 73.1 89.8 93.8 78.3 135.8 REMARK 620 7 HOH A2015 O 86.8 87.6 85.9 121.7 63.4 159.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF A1349 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GDP A1348 O2B REMARK 620 2 ALF A1349 F1 93.1 REMARK 620 3 ALF A1349 F2 87.7 89.8 REMARK 620 4 ALF A1349 F3 92.2 90.1 179.9 REMARK 620 5 ALF A1349 F4 88.2 177.8 88.5 91.6 REMARK 620 6 MG A1350 MG 69.6 112.9 29.3 150.7 66.0 REMARK 620 7 HOH A2012 O 171.3 94.1 97.3 82.8 84.8 112.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 1348 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ALF A 1349 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1350 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2IHB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HETERODIMERIC COMPLEX OF HUMANRGS10 AND REMARK 900 ACTIVATED GI ALPHA 3 REMARK 900 RELATED ID: 2AF0 RELATED DB: PDB REMARK 900 STRUCTURE OF THE REGULATOR OF G-PROTEIN SIGNALING DOMAIN OFRGS2 REMARK 999 REMARK 999 SEQUENCE REMARK 999 TRIPLE MUTANT C106S, N184D, E191K DBREF 2V4Z A 2 3 PDB 2V4Z 2V4Z 2 3 DBREF 2V4Z A 4 350 UNP P08754 GNAI3_HUMAN 4 350 DBREF 2V4Z A 351 351 PDB 2V4Z 2V4Z 351 351 DBREF 2V4Z B 68 70 PDB 2V4Z 2V4Z 68 70 DBREF 2V4Z B 71 209 UNP P41220 RGS2_HUMAN 71 209 SEQADV 2V4Z SER B 106 UNP P41220 CYS 106 ENGINEERED MUTATION SEQADV 2V4Z ASP B 184 UNP P41220 ASN 184 ENGINEERED MUTATION SEQADV 2V4Z LYS B 191 UNP P41220 GLU 191 ENGINEERED MUTATION SEQRES 1 A 350 SER MET THR LEU SER ALA GLU ASP LYS ALA ALA VAL GLU SEQRES 2 A 350 ARG SER LYS MET ILE ASP ARG ASN LEU ARG GLU ASP GLY SEQRES 3 A 350 GLU LYS ALA ALA LYS GLU VAL LYS LEU LEU LEU LEU GLY SEQRES 4 A 350 ALA GLY GLU SER GLY LYS SER THR ILE VAL LYS GLN MET SEQRES 5 A 350 LYS ILE ILE HIS GLU ASP GLY TYR SER GLU ASP GLU CYS SEQRES 6 A 350 LYS GLN TYR LYS VAL VAL VAL TYR SER ASN THR ILE GLN SEQRES 7 A 350 SER ILE ILE ALA ILE ILE ARG ALA MET GLY ARG LEU LYS SEQRES 8 A 350 ILE ASP PHE GLY GLU ALA ALA ARG ALA ASP ASP ALA ARG SEQRES 9 A 350 GLN LEU PHE VAL LEU ALA GLY SER ALA GLU GLU GLY VAL SEQRES 10 A 350 MET THR PRO GLU LEU ALA GLY VAL ILE LYS ARG LEU TRP SEQRES 11 A 350 ARG ASP GLY GLY VAL GLN ALA CYS PHE SER ARG SER ARG SEQRES 12 A 350 GLU TYR GLN LEU ASN ASP SER ALA SER TYR TYR LEU ASN SEQRES 13 A 350 ASP LEU ASP ARG ILE SER GLN SER ASN TYR ILE PRO THR SEQRES 14 A 350 GLN GLN ASP VAL LEU ARG THR ARG VAL LYS THR THR GLY SEQRES 15 A 350 ILE VAL GLU THR HIS PHE THR PHE LYS ASP LEU TYR PHE SEQRES 16 A 350 LYS MET PHE ASP VAL GLY GLY GLN ARG SER GLU ARG LYS SEQRES 17 A 350 LYS TRP ILE HIS CYS PHE GLU GLY VAL THR ALA ILE ILE SEQRES 18 A 350 PHE CYS VAL ALA LEU SER ASP TYR ASP LEU VAL LEU ALA SEQRES 19 A 350 GLU ASP GLU GLU MET ASN ARG MET HIS GLU SER MET LYS SEQRES 20 A 350 LEU PHE ASP SER ILE CYS ASN ASN LYS TRP PHE THR GLU SEQRES 21 A 350 THR SER ILE ILE LEU PHE LEU ASN LYS LYS ASP LEU PHE SEQRES 22 A 350 GLU GLU LYS ILE LYS ARG SER PRO LEU THR ILE CYS TYR SEQRES 23 A 350 PRO GLU TYR THR GLY SER ASN THR TYR GLU GLU ALA ALA SEQRES 24 A 350 ALA TYR ILE GLN CYS GLN PHE GLU ASP LEU ASN ARG ARG SEQRES 25 A 350 LYS ASP THR LYS GLU ILE TYR THR HIS PHE THR CYS ALA SEQRES 26 A 350 THR ASP THR LYS ASN VAL GLN PHE VAL PHE ASP ALA VAL SEQRES 27 A 350 THR ASP VAL ILE ILE LYS ASN ASN LEU LYS GLU SER SEQRES 1 B 142 SER ASN ALA LYS PRO SER PRO GLU GLU ALA GLN LEU TRP SEQRES 2 B 142 SER GLU ALA PHE ASP GLU LEU LEU ALA SER LYS TYR GLY SEQRES 3 B 142 LEU ALA ALA PHE ARG ALA PHE LEU LYS SER GLU PHE SER SEQRES 4 B 142 GLU GLU ASN ILE GLU PHE TRP LEU ALA CYS GLU ASP PHE SEQRES 5 B 142 LYS LYS THR LYS SER PRO GLN LYS LEU SER SER LYS ALA SEQRES 6 B 142 ARG LYS ILE TYR THR ASP PHE ILE GLU LYS GLU ALA PRO SEQRES 7 B 142 LYS GLU ILE ASN ILE ASP PHE GLN THR LYS THR LEU ILE SEQRES 8 B 142 ALA GLN ASN ILE GLN GLU ALA THR SER GLY CYS PHE THR SEQRES 9 B 142 THR ALA GLN LYS ARG VAL TYR SER LEU MET GLU ASN ASP SEQRES 10 B 142 SER TYR PRO ARG PHE LEU LYS SER GLU PHE TYR GLN ASP SEQRES 11 B 142 LEU CYS LYS LYS PRO GLN ILE THR THR GLU PRO HIS HET GDP A1348 28 HET ALF A1349 5 HET MG A1350 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM MG MAGNESIUM ION FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 ALF AL F4 1- FORMUL 5 MG MG 2+ FORMUL 6 HOH *18(H2 O) HELIX 1 1 GLY A 45 GLU A 58 1 14 HELIX 2 2 SER A 62 TYR A 69 1 8 HELIX 3 3 TYR A 69 LYS A 92 1 24 HELIX 4 4 ALA A 99 ALA A 114 1 16 HELIX 5 5 THR A 120 ASP A 133 1 14 HELIX 6 6 ASP A 133 ARG A 142 1 10 HELIX 7 7 SER A 143 TYR A 146 5 4 HELIX 8 8 SER A 151 ASN A 157 1 7 HELIX 9 9 ASP A 158 SER A 163 1 6 HELIX 10 10 THR A 170 THR A 177 1 8 HELIX 11 11 GLN A 204 PHE A 215 5 12 HELIX 12 12 SER A 228 LEU A 232 5 5 HELIX 13 13 ASN A 241 ASN A 255 1 15 HELIX 14 14 ASN A 256 THR A 260 5 5 HELIX 15 15 LYS A 270 ILE A 278 1 9 HELIX 16 16 PRO A 282 CYS A 286 5 5 HELIX 17 17 THR A 295 ASP A 309 1 15 HELIX 18 18 ASP A 328 ASN A 346 1 19 HELIX 19 19 PRO B 74 TRP B 80 1 7 HELIX 20 20 ALA B 83 SER B 90 1 8 HELIX 21 21 SER B 90 GLU B 104 1 15 HELIX 22 22 GLU B 107 LYS B 120 1 14 HELIX 23 23 SER B 124 ILE B 140 1 17 HELIX 24 24 ASP B 151 ASN B 161 1 11 HELIX 25 25 PHE B 170 ASP B 184 1 15 HELIX 26 26 ASP B 184 SER B 192 1 9 HELIX 27 27 SER B 192 CYS B 199 1 8 SHEET 1 AA 6 ILE A 184 THR A 190 0 SHEET 2 AA 6 TYR A 195 VAL A 201 -1 O PHE A 196 N PHE A 189 SHEET 3 AA 6 GLU A 33 LEU A 39 1 O VAL A 34 N LYS A 197 SHEET 4 AA 6 ALA A 220 ALA A 226 1 O ALA A 220 N LEU A 37 SHEET 5 AA 6 SER A 263 ASN A 269 1 O SER A 263 N ILE A 221 SHEET 6 AA 6 ILE A 319 PHE A 323 1 O TYR A 320 N LEU A 266 LINK OG SER A 47 MG MG A1350 1555 1555 2.19 LINK OG1 THR A 181 MG MG A1350 1555 1555 1.89 LINK O2B GDP A1348 AL ALF A1349 1555 1555 1.78 LINK O3B GDP A1348 MG MG A1350 1555 1555 1.89 LINK F2 ALF A1349 MG MG A1350 1555 1555 1.78 LINK AL ALF A1349 MG MG A1350 1555 1555 3.11 LINK F4 ALF A1349 MG MG A1350 1555 1555 2.89 LINK AL ALF A1349 O HOH A2012 1555 1555 1.93 LINK MG MG A1350 O HOH A2002 1555 1555 2.06 LINK MG MG A1350 O HOH A2015 1555 1555 2.08 CISPEP 1 GLU A 116 GLY A 117 0 -6.14 CISPEP 2 SER B 73 PRO B 74 0 4.65 SITE 1 AC1 24 GLU A 43 SER A 44 GLY A 45 LYS A 46 SITE 2 AC1 24 SER A 47 THR A 48 ASP A 150 SER A 151 SITE 3 AC1 24 LEU A 175 ARG A 176 THR A 177 ARG A 178 SITE 4 AC1 24 ASN A 269 LYS A 270 ASP A 272 LEU A 273 SITE 5 AC1 24 CYS A 325 ALA A 326 THR A 327 ALF A1349 SITE 6 AC1 24 MG A1350 HOH A2002 HOH A2015 HOH A2016 SITE 1 AC2 14 GLY A 42 GLU A 43 LYS A 46 ARG A 178 SITE 2 AC2 14 LYS A 180 THR A 181 VAL A 201 GLY A 203 SITE 3 AC2 14 GLN A 204 GDP A1348 MG A1350 HOH A2002 SITE 4 AC2 14 HOH A2012 HOH A2015 SITE 1 AC3 6 SER A 47 THR A 181 GDP A1348 ALF A1349 SITE 2 AC3 6 HOH A2002 HOH A2015 CRYST1 114.539 114.539 99.330 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008731 0.005041 0.000000 0.00000 SCALE2 0.000000 0.010081 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010067 0.00000