PDB Short entry for 2VM8 HEADER SIGNALING PROTEIN 24-JAN-08 2VM8 TITLE HUMAN CRMP-2 CRYSTALLISED IN THE PRESENCE OF MG COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROPYRIMIDINASE-RELATED PROTEIN 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 13-490; COMPND 5 SYNONYM: COLLAPSIN RESPONSE MEDIATOR PROTEIN 2, DRP-2, CRMP-2, N2A3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS NEUROGENESIS, PHOSPHOPROTEIN, DIFFERENTIATION, CRMP, CYTOPLASM, TIM KEYWDS 2 BARREL, POLYMORPHISM, AXONAL PATHFINDING, DEVELOPMENTAL PROTEIN, KEYWDS 3 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.KURSULA REVDAT 6 13-DEC-23 2VM8 1 REMARK LINK REVDAT 5 17-JAN-18 2VM8 1 REMARK REVDAT 4 28-APR-09 2VM8 1 CRYST1 REVDAT 3 24-FEB-09 2VM8 1 VERSN REVDAT 2 07-OCT-08 2VM8 1 JRNL REVDAT 1 26-AUG-08 2VM8 0 JRNL AUTH V.MAJAVA,N.LOYTYNOJA,W.Q.CHEN,G.LUBEC,P.KURSULA JRNL TITL CRYSTAL AND SOLUTION STRUCTURE, STABILITY AND POST- JRNL TITL 2 TRANSLATIONAL MODIFICATIONS OF COLLAPSIN RESPONSE MEDIATOR JRNL TITL 3 PROTEIN 2. JRNL REF FEBS J. V. 275 4583 2008 JRNL REFN ISSN 1742-464X JRNL PMID 18699782 JRNL DOI 10.1111/J.1742-4658.2008.06601.X REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0028 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 162237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.259 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.325 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8539 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10173 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3840 REMARK 3 BIN FREE R VALUE SET COUNT : 535 REMARK 3 BIN FREE R VALUE : 0.4190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 14674 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 1793 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.04000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : 2.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.209 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.211 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.571 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.847 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 15057 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 10053 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 20454 ; 1.579 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 24649 ; 0.984 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1929 ; 6.645 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 665 ;38.435 ;24.797 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2559 ;16.061 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 77 ;17.645 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2311 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 16902 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2907 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3900 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 11546 ; 0.209 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7390 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 8123 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1472 ; 0.245 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 38 ; 0.236 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 12242 ; 1.471 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 15384 ; 1.891 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6371 ; 2.670 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5056 ; 3.428 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. DUE TO PSEUDOTRANSLATIONAL SYMMETRY, THE R FACTORS REMARK 3 REMAINED HIGHER THAN EXPECTED DURING REFINEMENT. REMARK 4 REMARK 4 2VM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1290035104. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0408 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 170498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2GSE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.25500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.87500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.12000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 104.87500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.25500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.12000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 77000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 VAL A 0 REMARK 465 ASP A 1 REMARK 465 LEU A 2 REMARK 465 GLY A 3 REMARK 465 THR A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 LEU A 7 REMARK 465 TYR A 8 REMARK 465 PHE A 9 REMARK 465 GLN A 10 REMARK 465 SER A 11 REMARK 465 MET A 12 REMARK 465 THR A 13 REMARK 465 MET B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 SER B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 VAL B 0 REMARK 465 ASP B 1 REMARK 465 LEU B 2 REMARK 465 GLY B 3 REMARK 465 THR B 4 REMARK 465 GLU B 5 REMARK 465 ASN B 6 REMARK 465 LEU B 7 REMARK 465 TYR B 8 REMARK 465 PHE B 9 REMARK 465 GLN B 10 REMARK 465 SER B 11 REMARK 465 MET B 12 REMARK 465 THR B 13 REMARK 465 SER B 14 REMARK 465 MET C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 SER C -3 REMARK 465 SER C -2 REMARK 465 GLY C -1 REMARK 465 VAL C 0 REMARK 465 ASP C 1 REMARK 465 LEU C 2 REMARK 465 GLY C 3 REMARK 465 THR C 4 REMARK 465 GLU C 5 REMARK 465 ASN C 6 REMARK 465 LEU C 7 REMARK 465 TYR C 8 REMARK 465 PHE C 9 REMARK 465 GLN C 10 REMARK 465 SER C 11 REMARK 465 MET C 12 REMARK 465 THR C 13 REMARK 465 SER C 14 REMARK 465 MET D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 SER D -3 REMARK 465 SER D -2 REMARK 465 GLY D -1 REMARK 465 VAL D 0 REMARK 465 ASP D 1 REMARK 465 LEU D 2 REMARK 465 GLY D 3 REMARK 465 THR D 4 REMARK 465 GLU D 5 REMARK 465 ASN D 6 REMARK 465 LEU D 7 REMARK 465 TYR D 8 REMARK 465 PHE D 9 REMARK 465 GLN D 10 REMARK 465 SER D 11 REMARK 465 MET D 12 REMARK 465 THR D 13 REMARK 465 SER D 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 2075 O HOH C 2375 2.00 REMARK 500 OG SER C 142 O HOH C 2153 2.03 REMARK 500 O HOH A 2266 O HOH A 2269 2.03 REMARK 500 O HOH C 2351 O HOH D 2297 2.04 REMARK 500 O HOH D 2040 O HOH D 2041 2.04 REMARK 500 O HOH B 2100 O HOH B 2116 2.07 REMARK 500 O HOH C 2104 O HOH C 2289 2.08 REMARK 500 OE1 GLU C 143 O HOH C 2157 2.10 REMARK 500 O HOH C 2314 O HOH C 2316 2.11 REMARK 500 O HOH B 2213 O HOH B 2263 2.12 REMARK 500 O HOH C 2376 O HOH C 2377 2.12 REMARK 500 OD2 ASP D 413 OG SER D 416 2.13 REMARK 500 O GLY D 399 O HOH D 2390 2.14 REMARK 500 O GLN C 81 O HOH C 2078 2.15 REMARK 500 O HOH B 2149 O HOH B 2307 2.15 REMARK 500 NZ LYS C 341 O HOH C 2364 2.15 REMARK 500 OE1 GLU C 229 OG SER C 259 2.16 REMARK 500 O HOH D 2072 O HOH D 2074 2.16 REMARK 500 O HOH A 2376 O HOH A 2381 2.16 REMARK 500 CG HIS D 333 O HOH D 2356 2.16 REMARK 500 OD2 ASP C 80 O HOH C 2075 2.16 REMARK 500 OE2 GLU B 490 O HOH B 2395 2.16 REMARK 500 O HOH C 2273 O HOH C 2274 2.17 REMARK 500 O VAL A 224 O HOH A 2224 2.17 REMARK 500 O THR D 355 O HOH D 2356 2.17 REMARK 500 O HOH B 2208 O HOH B 2211 2.17 REMARK 500 O HOH D 2177 O HOH D 2375 2.18 REMARK 500 O HOH C 2325 O HOH C 2327 2.18 REMARK 500 O HOH C 2256 O HOH C 2257 2.19 REMARK 500 O HOH B 2260 O HOH B 2296 2.19 REMARK 500 O HOH C 2184 O HOH C 2409 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS C 334 CB CYS C 334 SG -0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 15 -178.28 66.32 REMARK 500 ASN A 48 54.78 38.52 REMARK 500 PRO A 52 -178.33 -57.53 REMARK 500 GLN A 77 52.13 37.61 REMARK 500 GLN A 81 49.69 30.61 REMARK 500 PHE A 170 62.10 63.41 REMARK 500 ASP A 172 13.87 50.62 REMARK 500 ARG A 173 -57.07 -123.13 REMARK 500 SER A 385 -53.97 -138.16 REMARK 500 ASN A 426 48.64 -99.40 REMARK 500 GLU A 435 119.25 -34.76 REMARK 500 LEU A 488 173.19 -58.85 REMARK 500 GLN B 29 155.47 179.13 REMARK 500 GLU B 38 122.85 -174.94 REMARK 500 GLU B 47 47.52 -106.84 REMARK 500 ASN B 48 -16.43 164.41 REMARK 500 LEU B 49 114.38 0.51 REMARK 500 GLN B 77 37.06 30.77 REMARK 500 PHE B 170 64.01 75.73 REMARK 500 ARG B 173 -71.35 -174.82 REMARK 500 ARG B 173 -71.07 -174.99 REMARK 500 THR B 285 -157.26 -157.65 REMARK 500 ASP B 310 109.29 -57.20 REMARK 500 ASN B 347 101.31 -172.72 REMARK 500 SER B 385 -47.87 -140.98 REMARK 500 LEU B 444 -55.23 -129.60 REMARK 500 ASP B 456 51.01 38.28 REMARK 500 GLU C 38 115.67 -167.61 REMARK 500 ASN C 48 70.85 45.60 REMARK 500 PRO C 52 -166.97 -52.68 REMARK 500 PHE C 170 58.41 70.02 REMARK 500 ASP C 172 -0.28 60.19 REMARK 500 ARG C 173 -69.55 -109.50 REMARK 500 ALA C 239 -70.73 -41.36 REMARK 500 ASN C 347 104.14 -167.65 REMARK 500 SER C 385 -45.56 -145.59 REMARK 500 ASN C 393 31.97 71.58 REMARK 500 ASN C 426 44.79 -80.01 REMARK 500 ASP C 456 40.13 37.39 REMARK 500 ALA C 489 -160.76 -72.66 REMARK 500 GLU D 38 149.44 -175.47 REMARK 500 PRO D 52 -145.38 -67.35 REMARK 500 VAL D 72 3.27 -69.39 REMARK 500 HIS D 73 87.93 -154.92 REMARK 500 ARG D 75 57.43 -145.13 REMARK 500 GLN D 81 41.70 35.53 REMARK 500 PHE D 170 64.14 64.14 REMARK 500 ARG D 173 -68.28 -155.55 REMARK 500 GLU D 277 78.02 -119.55 REMARK 500 ALA D 332 46.25 35.45 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2017 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A2020 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A2033 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A2037 DISTANCE = 8.22 ANGSTROMS REMARK 525 HOH A2038 DISTANCE = 7.67 ANGSTROMS REMARK 525 HOH A2039 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A2049 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH A2115 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A2120 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH A2195 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH B2005 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH B2006 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH B2020 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH B2038 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH B2041 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B2049 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B2053 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B2074 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B2106 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B2159 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH C2011 DISTANCE = 7.09 ANGSTROMS REMARK 525 HOH C2019 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH C2022 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH C2024 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH C2034 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH C2036 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH C2041 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH C2058 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH C2187 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH C2218 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH C2224 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH C2239 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH D2006 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH D2017 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH D2018 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH D2025 DISTANCE = 8.33 ANGSTROMS REMARK 525 HOH D2060 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH D2062 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH D2068 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH D2159 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH D2160 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH D2161 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH D2162 DISTANCE = 7.18 ANGSTROMS REMARK 525 HOH D2195 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH D2196 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH D2199 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH D2234 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH D2235 DISTANCE = 5.97 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1491 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2061 O REMARK 620 2 HOH A2062 O 85.4 REMARK 620 3 HOH A2317 O 134.0 108.4 REMARK 620 4 HOH A2322 O 82.2 160.4 70.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1491 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2058 O REMARK 620 2 HOH B2059 O 79.6 REMARK 620 3 HOH B2292 O 150.8 95.9 REMARK 620 4 HOH B2293 O 82.0 138.7 82.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C1491 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C2076 O REMARK 620 2 HOH C2374 O 92.6 REMARK 620 3 HOH C2375 O 72.9 83.9 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 1491 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GSE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DIHYDROPYRIMIDINEASE -LIKE 2 DBREF 2VM8 A -10 12 PDB 2VM8 2VM8 -10 12 DBREF 2VM8 A 13 490 UNP Q16555 DPYL2_HUMAN 13 490 DBREF 2VM8 B -10 12 PDB 2VM8 2VM8 -10 12 DBREF 2VM8 B 13 490 UNP Q16555 DPYL2_HUMAN 13 490 DBREF 2VM8 C -10 12 PDB 2VM8 2VM8 -10 12 DBREF 2VM8 C 13 490 UNP Q16555 DPYL2_HUMAN 13 490 DBREF 2VM8 D -10 12 PDB 2VM8 2VM8 -10 12 DBREF 2VM8 D 13 490 UNP Q16555 DPYL2_HUMAN 13 490 SEQRES 1 A 501 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 501 GLY THR GLU ASN LEU TYR PHE GLN SER MET THR SER ASP SEQRES 3 A 501 ARG LEU LEU ILE LYS GLY GLY LYS ILE VAL ASN ASP ASP SEQRES 4 A 501 GLN SER PHE TYR ALA ASP ILE TYR MET GLU ASP GLY LEU SEQRES 5 A 501 ILE LYS GLN ILE GLY GLU ASN LEU ILE VAL PRO GLY GLY SEQRES 6 A 501 VAL LYS THR ILE GLU ALA HIS SER ARG MET VAL ILE PRO SEQRES 7 A 501 GLY GLY ILE ASP VAL HIS THR ARG PHE GLN MET PRO ASP SEQRES 8 A 501 GLN GLY MET THR SER ALA ASP ASP PHE PHE GLN GLY THR SEQRES 9 A 501 LYS ALA ALA LEU ALA GLY GLY THR THR MET ILE ILE ASP SEQRES 10 A 501 HIS VAL VAL PRO GLU PRO GLY THR SER LEU LEU ALA ALA SEQRES 11 A 501 PHE ASP GLN TRP ARG GLU TRP ALA ASP SER LYS SER CYS SEQRES 12 A 501 CYS ASP TYR SER LEU HIS VAL ASP ILE SER GLU TRP HIS SEQRES 13 A 501 LYS GLY ILE GLN GLU GLU MET GLU ALA LEU VAL LYS ASP SEQRES 14 A 501 HIS GLY VAL ASN SER PHE LEU VAL TYR MET ALA PHE LYS SEQRES 15 A 501 ASP ARG PHE GLN LEU THR ASP CYS GLN ILE TYR GLU VAL SEQRES 16 A 501 LEU SER VAL ILE ARG ASP ILE GLY ALA ILE ALA GLN VAL SEQRES 17 A 501 HIS ALA GLU ASN GLY ASP ILE ILE ALA GLU GLU GLN GLN SEQRES 18 A 501 ARG ILE LEU ASP LEU GLY ILE THR GLY PRO GLU GLY HIS SEQRES 19 A 501 VAL LEU SER ARG PRO GLU GLU VAL GLU ALA GLU ALA VAL SEQRES 20 A 501 ASN ARG ALA ILE THR ILE ALA ASN GLN THR ASN CYS PRO SEQRES 21 A 501 LEU TYR ILE THR LYS VAL MET SER LYS SER SER ALA GLU SEQRES 22 A 501 VAL ILE ALA GLN ALA ARG LYS LYS GLY THR VAL VAL TYR SEQRES 23 A 501 GLY GLU PRO ILE THR ALA SER LEU GLY THR ASP GLY SER SEQRES 24 A 501 HIS TYR TRP SER LYS ASN TRP ALA LYS ALA ALA ALA PHE SEQRES 25 A 501 VAL THR SER PRO PRO LEU SER PRO ASP PRO THR THR PRO SEQRES 26 A 501 ASP PHE LEU ASN SER LEU LEU SER CYS GLY ASP LEU GLN SEQRES 27 A 501 VAL THR GLY SER ALA HIS CYS THR PHE ASN THR ALA GLN SEQRES 28 A 501 LYS ALA VAL GLY LYS ASP ASN PHE THR LEU ILE PRO GLU SEQRES 29 A 501 GLY THR ASN GLY THR GLU GLU ARG MET SER VAL ILE TRP SEQRES 30 A 501 ASP LYS ALA VAL VAL THR GLY LYS MET ASP GLU ASN GLN SEQRES 31 A 501 PHE VAL ALA VAL THR SER THR ASN ALA ALA LYS VAL PHE SEQRES 32 A 501 ASN LEU TYR PRO ARG LYS GLY ARG ILE ALA VAL GLY SER SEQRES 33 A 501 ASP ALA ASP LEU VAL ILE TRP ASP PRO ASP SER VAL LYS SEQRES 34 A 501 THR ILE SER ALA LYS THR HIS ASN SER SER LEU GLU TYR SEQRES 35 A 501 ASN ILE PHE GLU GLY MET GLU CYS ARG GLY SER PRO LEU SEQRES 36 A 501 VAL VAL ILE SER GLN GLY LYS ILE VAL LEU GLU ASP GLY SEQRES 37 A 501 THR LEU HIS VAL THR GLU GLY SER GLY ARG TYR ILE PRO SEQRES 38 A 501 ARG LYS PRO PHE PRO ASP PHE VAL TYR LYS ARG ILE LYS SEQRES 39 A 501 ALA ARG SER ARG LEU ALA GLU SEQRES 1 B 501 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 501 GLY THR GLU ASN LEU TYR PHE GLN SER MET THR SER ASP SEQRES 3 B 501 ARG LEU LEU ILE LYS GLY GLY LYS ILE VAL ASN ASP ASP SEQRES 4 B 501 GLN SER PHE TYR ALA ASP ILE TYR MET GLU ASP GLY LEU SEQRES 5 B 501 ILE LYS GLN ILE GLY GLU ASN LEU ILE VAL PRO GLY GLY SEQRES 6 B 501 VAL LYS THR ILE GLU ALA HIS SER ARG MET VAL ILE PRO SEQRES 7 B 501 GLY GLY ILE ASP VAL HIS THR ARG PHE GLN MET PRO ASP SEQRES 8 B 501 GLN GLY MET THR SER ALA ASP ASP PHE PHE GLN GLY THR SEQRES 9 B 501 LYS ALA ALA LEU ALA GLY GLY THR THR MET ILE ILE ASP SEQRES 10 B 501 HIS VAL VAL PRO GLU PRO GLY THR SER LEU LEU ALA ALA SEQRES 11 B 501 PHE ASP GLN TRP ARG GLU TRP ALA ASP SER LYS SER CYS SEQRES 12 B 501 CYS ASP TYR SER LEU HIS VAL ASP ILE SER GLU TRP HIS SEQRES 13 B 501 LYS GLY ILE GLN GLU GLU MET GLU ALA LEU VAL LYS ASP SEQRES 14 B 501 HIS GLY VAL ASN SER PHE LEU VAL TYR MET ALA PHE LYS SEQRES 15 B 501 ASP ARG PHE GLN LEU THR ASP CYS GLN ILE TYR GLU VAL SEQRES 16 B 501 LEU SER VAL ILE ARG ASP ILE GLY ALA ILE ALA GLN VAL SEQRES 17 B 501 HIS ALA GLU ASN GLY ASP ILE ILE ALA GLU GLU GLN GLN SEQRES 18 B 501 ARG ILE LEU ASP LEU GLY ILE THR GLY PRO GLU GLY HIS SEQRES 19 B 501 VAL LEU SER ARG PRO GLU GLU VAL GLU ALA GLU ALA VAL SEQRES 20 B 501 ASN ARG ALA ILE THR ILE ALA ASN GLN THR ASN CYS PRO SEQRES 21 B 501 LEU TYR ILE THR LYS VAL MET SER LYS SER SER ALA GLU SEQRES 22 B 501 VAL ILE ALA GLN ALA ARG LYS LYS GLY THR VAL VAL TYR SEQRES 23 B 501 GLY GLU PRO ILE THR ALA SER LEU GLY THR ASP GLY SER SEQRES 24 B 501 HIS TYR TRP SER LYS ASN TRP ALA LYS ALA ALA ALA PHE SEQRES 25 B 501 VAL THR SER PRO PRO LEU SER PRO ASP PRO THR THR PRO SEQRES 26 B 501 ASP PHE LEU ASN SER LEU LEU SER CYS GLY ASP LEU GLN SEQRES 27 B 501 VAL THR GLY SER ALA HIS CYS THR PHE ASN THR ALA GLN SEQRES 28 B 501 LYS ALA VAL GLY LYS ASP ASN PHE THR LEU ILE PRO GLU SEQRES 29 B 501 GLY THR ASN GLY THR GLU GLU ARG MET SER VAL ILE TRP SEQRES 30 B 501 ASP LYS ALA VAL VAL THR GLY LYS MET ASP GLU ASN GLN SEQRES 31 B 501 PHE VAL ALA VAL THR SER THR ASN ALA ALA LYS VAL PHE SEQRES 32 B 501 ASN LEU TYR PRO ARG LYS GLY ARG ILE ALA VAL GLY SER SEQRES 33 B 501 ASP ALA ASP LEU VAL ILE TRP ASP PRO ASP SER VAL LYS SEQRES 34 B 501 THR ILE SER ALA LYS THR HIS ASN SER SER LEU GLU TYR SEQRES 35 B 501 ASN ILE PHE GLU GLY MET GLU CYS ARG GLY SER PRO LEU SEQRES 36 B 501 VAL VAL ILE SER GLN GLY LYS ILE VAL LEU GLU ASP GLY SEQRES 37 B 501 THR LEU HIS VAL THR GLU GLY SER GLY ARG TYR ILE PRO SEQRES 38 B 501 ARG LYS PRO PHE PRO ASP PHE VAL TYR LYS ARG ILE LYS SEQRES 39 B 501 ALA ARG SER ARG LEU ALA GLU SEQRES 1 C 501 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 501 GLY THR GLU ASN LEU TYR PHE GLN SER MET THR SER ASP SEQRES 3 C 501 ARG LEU LEU ILE LYS GLY GLY LYS ILE VAL ASN ASP ASP SEQRES 4 C 501 GLN SER PHE TYR ALA ASP ILE TYR MET GLU ASP GLY LEU SEQRES 5 C 501 ILE LYS GLN ILE GLY GLU ASN LEU ILE VAL PRO GLY GLY SEQRES 6 C 501 VAL LYS THR ILE GLU ALA HIS SER ARG MET VAL ILE PRO SEQRES 7 C 501 GLY GLY ILE ASP VAL HIS THR ARG PHE GLN MET PRO ASP SEQRES 8 C 501 GLN GLY MET THR SER ALA ASP ASP PHE PHE GLN GLY THR SEQRES 9 C 501 LYS ALA ALA LEU ALA GLY GLY THR THR MET ILE ILE ASP SEQRES 10 C 501 HIS VAL VAL PRO GLU PRO GLY THR SER LEU LEU ALA ALA SEQRES 11 C 501 PHE ASP GLN TRP ARG GLU TRP ALA ASP SER LYS SER CYS SEQRES 12 C 501 CYS ASP TYR SER LEU HIS VAL ASP ILE SER GLU TRP HIS SEQRES 13 C 501 LYS GLY ILE GLN GLU GLU MET GLU ALA LEU VAL LYS ASP SEQRES 14 C 501 HIS GLY VAL ASN SER PHE LEU VAL TYR MET ALA PHE LYS SEQRES 15 C 501 ASP ARG PHE GLN LEU THR ASP CYS GLN ILE TYR GLU VAL SEQRES 16 C 501 LEU SER VAL ILE ARG ASP ILE GLY ALA ILE ALA GLN VAL SEQRES 17 C 501 HIS ALA GLU ASN GLY ASP ILE ILE ALA GLU GLU GLN GLN SEQRES 18 C 501 ARG ILE LEU ASP LEU GLY ILE THR GLY PRO GLU GLY HIS SEQRES 19 C 501 VAL LEU SER ARG PRO GLU GLU VAL GLU ALA GLU ALA VAL SEQRES 20 C 501 ASN ARG ALA ILE THR ILE ALA ASN GLN THR ASN CYS PRO SEQRES 21 C 501 LEU TYR ILE THR LYS VAL MET SER LYS SER SER ALA GLU SEQRES 22 C 501 VAL ILE ALA GLN ALA ARG LYS LYS GLY THR VAL VAL TYR SEQRES 23 C 501 GLY GLU PRO ILE THR ALA SER LEU GLY THR ASP GLY SER SEQRES 24 C 501 HIS TYR TRP SER LYS ASN TRP ALA LYS ALA ALA ALA PHE SEQRES 25 C 501 VAL THR SER PRO PRO LEU SER PRO ASP PRO THR THR PRO SEQRES 26 C 501 ASP PHE LEU ASN SER LEU LEU SER CYS GLY ASP LEU GLN SEQRES 27 C 501 VAL THR GLY SER ALA HIS CYS THR PHE ASN THR ALA GLN SEQRES 28 C 501 LYS ALA VAL GLY LYS ASP ASN PHE THR LEU ILE PRO GLU SEQRES 29 C 501 GLY THR ASN GLY THR GLU GLU ARG MET SER VAL ILE TRP SEQRES 30 C 501 ASP LYS ALA VAL VAL THR GLY LYS MET ASP GLU ASN GLN SEQRES 31 C 501 PHE VAL ALA VAL THR SER THR ASN ALA ALA LYS VAL PHE SEQRES 32 C 501 ASN LEU TYR PRO ARG LYS GLY ARG ILE ALA VAL GLY SER SEQRES 33 C 501 ASP ALA ASP LEU VAL ILE TRP ASP PRO ASP SER VAL LYS SEQRES 34 C 501 THR ILE SER ALA LYS THR HIS ASN SER SER LEU GLU TYR SEQRES 35 C 501 ASN ILE PHE GLU GLY MET GLU CYS ARG GLY SER PRO LEU SEQRES 36 C 501 VAL VAL ILE SER GLN GLY LYS ILE VAL LEU GLU ASP GLY SEQRES 37 C 501 THR LEU HIS VAL THR GLU GLY SER GLY ARG TYR ILE PRO SEQRES 38 C 501 ARG LYS PRO PHE PRO ASP PHE VAL TYR LYS ARG ILE LYS SEQRES 39 C 501 ALA ARG SER ARG LEU ALA GLU SEQRES 1 D 501 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 D 501 GLY THR GLU ASN LEU TYR PHE GLN SER MET THR SER ASP SEQRES 3 D 501 ARG LEU LEU ILE LYS GLY GLY LYS ILE VAL ASN ASP ASP SEQRES 4 D 501 GLN SER PHE TYR ALA ASP ILE TYR MET GLU ASP GLY LEU SEQRES 5 D 501 ILE LYS GLN ILE GLY GLU ASN LEU ILE VAL PRO GLY GLY SEQRES 6 D 501 VAL LYS THR ILE GLU ALA HIS SER ARG MET VAL ILE PRO SEQRES 7 D 501 GLY GLY ILE ASP VAL HIS THR ARG PHE GLN MET PRO ASP SEQRES 8 D 501 GLN GLY MET THR SER ALA ASP ASP PHE PHE GLN GLY THR SEQRES 9 D 501 LYS ALA ALA LEU ALA GLY GLY THR THR MET ILE ILE ASP SEQRES 10 D 501 HIS VAL VAL PRO GLU PRO GLY THR SER LEU LEU ALA ALA SEQRES 11 D 501 PHE ASP GLN TRP ARG GLU TRP ALA ASP SER LYS SER CYS SEQRES 12 D 501 CYS ASP TYR SER LEU HIS VAL ASP ILE SER GLU TRP HIS SEQRES 13 D 501 LYS GLY ILE GLN GLU GLU MET GLU ALA LEU VAL LYS ASP SEQRES 14 D 501 HIS GLY VAL ASN SER PHE LEU VAL TYR MET ALA PHE LYS SEQRES 15 D 501 ASP ARG PHE GLN LEU THR ASP CYS GLN ILE TYR GLU VAL SEQRES 16 D 501 LEU SER VAL ILE ARG ASP ILE GLY ALA ILE ALA GLN VAL SEQRES 17 D 501 HIS ALA GLU ASN GLY ASP ILE ILE ALA GLU GLU GLN GLN SEQRES 18 D 501 ARG ILE LEU ASP LEU GLY ILE THR GLY PRO GLU GLY HIS SEQRES 19 D 501 VAL LEU SER ARG PRO GLU GLU VAL GLU ALA GLU ALA VAL SEQRES 20 D 501 ASN ARG ALA ILE THR ILE ALA ASN GLN THR ASN CYS PRO SEQRES 21 D 501 LEU TYR ILE THR LYS VAL MET SER LYS SER SER ALA GLU SEQRES 22 D 501 VAL ILE ALA GLN ALA ARG LYS LYS GLY THR VAL VAL TYR SEQRES 23 D 501 GLY GLU PRO ILE THR ALA SER LEU GLY THR ASP GLY SER SEQRES 24 D 501 HIS TYR TRP SER LYS ASN TRP ALA LYS ALA ALA ALA PHE SEQRES 25 D 501 VAL THR SER PRO PRO LEU SER PRO ASP PRO THR THR PRO SEQRES 26 D 501 ASP PHE LEU ASN SER LEU LEU SER CYS GLY ASP LEU GLN SEQRES 27 D 501 VAL THR GLY SER ALA HIS CYS THR PHE ASN THR ALA GLN SEQRES 28 D 501 LYS ALA VAL GLY LYS ASP ASN PHE THR LEU ILE PRO GLU SEQRES 29 D 501 GLY THR ASN GLY THR GLU GLU ARG MET SER VAL ILE TRP SEQRES 30 D 501 ASP LYS ALA VAL VAL THR GLY LYS MET ASP GLU ASN GLN SEQRES 31 D 501 PHE VAL ALA VAL THR SER THR ASN ALA ALA LYS VAL PHE SEQRES 32 D 501 ASN LEU TYR PRO ARG LYS GLY ARG ILE ALA VAL GLY SER SEQRES 33 D 501 ASP ALA ASP LEU VAL ILE TRP ASP PRO ASP SER VAL LYS SEQRES 34 D 501 THR ILE SER ALA LYS THR HIS ASN SER SER LEU GLU TYR SEQRES 35 D 501 ASN ILE PHE GLU GLY MET GLU CYS ARG GLY SER PRO LEU SEQRES 36 D 501 VAL VAL ILE SER GLN GLY LYS ILE VAL LEU GLU ASP GLY SEQRES 37 D 501 THR LEU HIS VAL THR GLU GLY SER GLY ARG TYR ILE PRO SEQRES 38 D 501 ARG LYS PRO PHE PRO ASP PHE VAL TYR LYS ARG ILE LYS SEQRES 39 D 501 ALA ARG SER ARG LEU ALA GLU HET MG A1491 1 HET MG B1491 1 HET MG C1491 1 HETNAM MG MAGNESIUM ION FORMUL 5 MG 3(MG 2+) FORMUL 8 HOH *1793(H2 O) HELIX 1 1 ASP A 88 GLY A 99 1 12 HELIX 2 2 SER A 115 SER A 131 1 17 HELIX 3 3 HIS A 145 HIS A 159 1 15 HELIX 4 4 THR A 177 GLY A 192 1 16 HELIX 5 5 ASN A 201 ASP A 214 1 14 HELIX 6 6 PRO A 220 ARG A 227 1 8 HELIX 7 7 PRO A 228 ASN A 247 1 20 HELIX 8 8 SER A 257 LYS A 270 1 14 HELIX 9 9 ILE A 279 THR A 285 1 7 HELIX 10 10 ASP A 286 SER A 292 5 7 HELIX 11 11 ASN A 294 PHE A 301 1 8 HELIX 12 12 THR A 312 CYS A 323 1 12 HELIX 13 13 ASN A 337 ALA A 342 1 6 HELIX 14 14 VAL A 343 LYS A 345 5 3 HELIX 15 15 ASN A 347 ILE A 351 5 5 HELIX 16 16 GLU A 360 VAL A 370 1 11 HELIX 17 17 ASP A 376 SER A 385 1 10 HELIX 18 18 SER A 385 ASN A 393 1 9 HELIX 19 19 PRO A 475 LEU A 488 1 14 HELIX 20 20 ASP B 88 GLY B 99 1 12 HELIX 21 21 SER B 115 SER B 131 1 17 HELIX 22 22 GLY B 147 HIS B 159 1 13 HELIX 23 23 THR B 177 GLY B 192 1 16 HELIX 24 24 ASN B 201 LEU B 215 1 15 HELIX 25 25 PRO B 220 SER B 226 1 7 HELIX 26 26 PRO B 228 ASN B 247 1 20 HELIX 27 27 SER B 257 LYS B 270 1 14 HELIX 28 28 ILE B 279 THR B 285 1 7 HELIX 29 29 ASP B 286 SER B 292 5 7 HELIX 30 30 ASN B 294 ALA B 299 1 6 HELIX 31 31 ALA B 300 VAL B 302 5 3 HELIX 32 32 THR B 312 CYS B 323 1 12 HELIX 33 33 ASN B 337 ALA B 342 1 6 HELIX 34 34 VAL B 343 LYS B 345 5 3 HELIX 35 35 ASN B 347 ILE B 351 5 5 HELIX 36 36 GLU B 360 VAL B 370 1 11 HELIX 37 37 ASP B 376 SER B 385 1 10 HELIX 38 38 SER B 385 PHE B 392 1 8 HELIX 39 39 PRO B 475 ARG B 487 1 13 HELIX 40 40 ASP C 88 GLY C 99 1 12 HELIX 41 41 SER C 115 SER C 131 1 17 HELIX 42 42 GLY C 147 HIS C 159 1 13 HELIX 43 43 THR C 177 GLY C 192 1 16 HELIX 44 44 ASN C 201 LEU C 215 1 15 HELIX 45 45 PRO C 220 ARG C 227 1 8 HELIX 46 46 PRO C 228 ASN C 247 1 20 HELIX 47 47 SER C 257 LYS C 270 1 14 HELIX 48 48 ILE C 279 THR C 285 1 7 HELIX 49 49 ASP C 286 TRP C 291 5 6 HELIX 50 50 ASN C 294 PHE C 301 1 8 HELIX 51 51 THR C 312 CYS C 323 1 12 HELIX 52 52 ASN C 337 VAL C 343 1 7 HELIX 53 53 GLY C 344 ILE C 351 5 8 HELIX 54 54 GLU C 360 VAL C 370 1 11 HELIX 55 55 ASP C 376 VAL C 383 1 8 HELIX 56 56 SER C 385 PHE C 392 1 8 HELIX 57 57 PRO C 475 LEU C 488 1 14 HELIX 58 58 ASP D 88 ALA D 98 1 11 HELIX 59 59 SER D 115 SER D 131 1 17 HELIX 60 60 GLY D 147 HIS D 159 1 13 HELIX 61 61 THR D 177 GLY D 192 1 16 HELIX 62 62 ASN D 201 ASP D 214 1 14 HELIX 63 63 PRO D 220 SER D 226 1 7 HELIX 64 64 PRO D 228 ASN D 247 1 20 HELIX 65 65 SER D 257 LYS D 270 1 14 HELIX 66 66 ILE D 279 THR D 285 1 7 HELIX 67 67 ASP D 286 SER D 292 5 7 HELIX 68 68 ASN D 294 PHE D 301 1 8 HELIX 69 69 THR D 312 CYS D 323 1 12 HELIX 70 70 ASN D 337 ALA D 342 1 6 HELIX 71 71 VAL D 343 LYS D 345 5 3 HELIX 72 72 ASN D 347 ILE D 351 5 5 HELIX 73 73 GLU D 360 VAL D 370 1 11 HELIX 74 74 ASP D 376 SER D 385 1 10 HELIX 75 75 SER D 385 PHE D 392 1 8 HELIX 76 76 PRO D 475 LEU D 488 1 14 SHEET 1 AA 4 LEU A 41 GLY A 46 0 SHEET 2 AA 4 SER A 30 GLU A 38 -1 O ASP A 34 N GLY A 46 SHEET 3 AA 4 LEU A 17 VAL A 25 -1 O LEU A 17 N MET A 37 SHEET 4 AA 4 THR A 57 GLU A 59 1 O ILE A 58 N LYS A 20 SHEET 1 AB 8 LEU A 41 GLY A 46 0 SHEET 2 AB 8 SER A 30 GLU A 38 -1 O ASP A 34 N GLY A 46 SHEET 3 AB 8 LEU A 17 VAL A 25 -1 O LEU A 17 N MET A 37 SHEET 4 AB 8 MET A 64 PRO A 67 1 O VAL A 65 N VAL A 25 SHEET 5 AB 8 LEU A 409 THR A 419 -1 O VAL A 410 N ILE A 66 SHEET 6 AB 8 GLU A 438 SER A 448 -1 O CYS A 439 N LYS A 418 SHEET 7 AB 8 LYS A 451 GLU A 455 -1 O LYS A 451 N SER A 448 SHEET 8 AB 8 THR A 458 LEU A 459 -1 O THR A 458 N GLU A 455 SHEET 1 AC 7 GLY A 69 THR A 74 0 SHEET 2 AC 7 THR A 101 VAL A 108 1 N THR A 102 O GLY A 69 SHEET 3 AC 7 ASP A 134 ASP A 140 1 O ASP A 134 N ILE A 104 SHEET 4 AC 7 SER A 163 TYR A 167 1 O SER A 163 N VAL A 139 SHEET 5 AC 7 ILE A 194 HIS A 198 1 O ILE A 194 N PHE A 164 SHEET 6 AC 7 LEU A 250 VAL A 255 1 O TYR A 251 N VAL A 197 SHEET 7 AC 7 VAL A 274 PRO A 278 1 O TYR A 275 N ILE A 252 SHEET 1 AD 2 PRO A 79 ASP A 80 0 SHEET 2 AD 2 MET A 83 THR A 84 -1 O MET A 83 N ASP A 80 SHEET 1 BA 4 LEU B 41 GLY B 46 0 SHEET 2 BA 4 ASP B 34 GLU B 38 -1 O ASP B 34 N GLY B 46 SHEET 3 BA 4 LEU B 17 LYS B 20 -1 O LEU B 17 N MET B 37 SHEET 4 BA 4 LYS B 56 GLU B 59 1 O LYS B 56 N LEU B 18 SHEET 1 BB 7 SER B 30 TYR B 32 0 SHEET 2 BB 7 LYS B 23 VAL B 25 -1 O ILE B 24 N PHE B 31 SHEET 3 BB 7 MET B 64 PRO B 67 1 O VAL B 65 N VAL B 25 SHEET 4 BB 7 LEU B 409 THR B 419 -1 O VAL B 410 N ILE B 66 SHEET 5 BB 7 GLU B 438 SER B 448 -1 O CYS B 439 N LYS B 418 SHEET 6 BB 7 LYS B 451 GLU B 455 -1 O LYS B 451 N SER B 448 SHEET 7 BB 7 THR B 458 LEU B 459 -1 O THR B 458 N GLU B 455 SHEET 1 BC 7 GLY B 69 ASP B 71 0 SHEET 2 BC 7 THR B 101 VAL B 108 1 N THR B 102 O GLY B 69 SHEET 3 BC 7 ASP B 134 ASP B 140 1 O ASP B 134 N ILE B 104 SHEET 4 BC 7 SER B 163 TYR B 167 1 O SER B 163 N VAL B 139 SHEET 5 BC 7 ILE B 194 HIS B 198 1 O ILE B 194 N PHE B 164 SHEET 6 BC 7 LEU B 250 VAL B 255 1 O TYR B 251 N VAL B 197 SHEET 7 BC 7 VAL B 274 PRO B 278 1 O TYR B 275 N ILE B 252 SHEET 1 BD 2 PRO B 79 ASP B 80 0 SHEET 2 BD 2 MET B 83 THR B 84 -1 O MET B 83 N ASP B 80 SHEET 1 CA 4 LEU C 41 GLY C 46 0 SHEET 2 CA 4 ASP C 34 GLU C 38 -1 O ASP C 34 N GLY C 46 SHEET 3 CA 4 LEU C 17 LYS C 20 -1 O LEU C 17 N MET C 37 SHEET 4 CA 4 LYS C 56 GLU C 59 1 O LYS C 56 N LEU C 18 SHEET 1 CB 7 SER C 30 TYR C 32 0 SHEET 2 CB 7 LYS C 23 VAL C 25 -1 O ILE C 24 N PHE C 31 SHEET 3 CB 7 MET C 64 PRO C 67 1 O VAL C 65 N VAL C 25 SHEET 4 CB 7 LEU C 409 ILE C 420 -1 O VAL C 410 N ILE C 66 SHEET 5 CB 7 MET C 437 SER C 448 -1 O MET C 437 N ILE C 420 SHEET 6 CB 7 LYS C 451 GLU C 455 -1 O LYS C 451 N SER C 448 SHEET 7 CB 7 THR C 458 LEU C 459 -1 O THR C 458 N GLU C 455 SHEET 1 CC 7 GLY C 69 ASP C 71 0 SHEET 2 CC 7 THR C 101 VAL C 108 1 N THR C 102 O GLY C 69 SHEET 3 CC 7 ASP C 134 ILE C 141 1 O ASP C 134 N ILE C 104 SHEET 4 CC 7 SER C 163 TYR C 167 1 O SER C 163 N VAL C 139 SHEET 5 CC 7 ILE C 194 HIS C 198 1 O ILE C 194 N PHE C 164 SHEET 6 CC 7 LEU C 250 VAL C 255 1 O TYR C 251 N VAL C 197 SHEET 7 CC 7 VAL C 274 PRO C 278 1 O TYR C 275 N ILE C 252 SHEET 1 CD 2 PRO C 79 ASP C 80 0 SHEET 2 CD 2 MET C 83 THR C 84 -1 O MET C 83 N ASP C 80 SHEET 1 DA 4 LEU D 41 GLY D 46 0 SHEET 2 DA 4 ASP D 34 GLU D 38 -1 O ASP D 34 N GLY D 46 SHEET 3 DA 4 LEU D 17 LYS D 20 -1 O LEU D 17 N MET D 37 SHEET 4 DA 4 THR D 57 GLU D 59 1 O ILE D 58 N LYS D 20 SHEET 1 DB 7 SER D 30 TYR D 32 0 SHEET 2 DB 7 LYS D 23 VAL D 25 -1 O ILE D 24 N PHE D 31 SHEET 3 DB 7 MET D 64 PRO D 67 1 O VAL D 65 N VAL D 25 SHEET 4 DB 7 LEU D 409 ILE D 420 -1 O VAL D 410 N ILE D 66 SHEET 5 DB 7 MET D 437 SER D 448 -1 O MET D 437 N ILE D 420 SHEET 6 DB 7 LYS D 451 GLU D 455 -1 O LYS D 451 N SER D 448 SHEET 7 DB 7 THR D 458 LEU D 459 -1 O THR D 458 N GLU D 455 SHEET 1 DC 7 GLY D 69 ASP D 71 0 SHEET 2 DC 7 THR D 101 VAL D 108 1 N THR D 102 O GLY D 69 SHEET 3 DC 7 ASP D 134 ASP D 140 1 O ASP D 134 N ILE D 104 SHEET 4 DC 7 SER D 163 TYR D 167 1 O SER D 163 N VAL D 139 SHEET 5 DC 7 ILE D 194 HIS D 198 1 O ILE D 194 N PHE D 164 SHEET 6 DC 7 LEU D 250 VAL D 255 1 O TYR D 251 N VAL D 197 SHEET 7 DC 7 VAL D 274 PRO D 278 1 O TYR D 275 N ILE D 252 SHEET 1 DD 2 PRO D 79 ASP D 80 0 SHEET 2 DD 2 MET D 83 THR D 84 -1 O MET D 83 N ASP D 80 LINK MG MG A1491 O HOH A2061 1555 1555 2.24 LINK MG MG A1491 O HOH A2062 1555 1555 2.32 LINK MG MG A1491 O HOH A2317 1555 1555 2.49 LINK MG MG A1491 O HOH A2322 1555 1555 2.31 LINK MG MG B1491 O HOH B2058 1555 1555 2.68 LINK MG MG B1491 O HOH B2059 1555 1555 2.51 LINK MG MG B1491 O HOH B2292 1555 1555 1.97 LINK MG MG B1491 O HOH B2293 1555 1555 2.16 LINK MG MG C1491 O HOH C2076 1555 1555 2.55 LINK MG MG C1491 O HOH C2374 1555 1555 1.91 LINK MG MG C1491 O HOH C2375 1555 1555 2.37 CISPEP 1 SER A 304 PRO A 305 0 -1.76 CISPEP 2 TYR A 395 PRO A 396 0 4.49 CISPEP 3 SER B 304 PRO B 305 0 -7.63 CISPEP 4 TYR B 395 PRO B 396 0 1.05 CISPEP 5 SER C 304 PRO C 305 0 -4.90 CISPEP 6 TYR C 395 PRO C 396 0 0.06 CISPEP 7 SER D 304 PRO D 305 0 -5.56 CISPEP 8 TYR D 395 PRO D 396 0 -2.43 SITE 1 AC1 5 GLU B 353 HOH B2058 HOH B2059 HOH B2292 SITE 2 AC1 5 HOH B2293 SITE 1 AC2 6 GLN A 81 GLU A 353 HOH A2061 HOH A2062 SITE 2 AC2 6 HOH A2317 HOH A2322 SITE 1 AC3 5 GLN C 81 THR C 349 HOH C2076 HOH C2374 SITE 2 AC3 5 HOH C2375 CRYST1 86.510 126.240 209.750 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011559 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004768 0.00000