PDB Short entry for 2X10 HEADER RECEPTOR 21-DEC-09 2X10 TITLE CRYSTAL STRUCTURE OF THE COMPLETE EPHA2 ECTODOMAIN CAVEAT 2X10 NAG A 1531 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPHRIN TYPE-A RECEPTOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ECTODOMAIN, RESIDUES 27-534; COMPND 5 SYNONYM: TYROSINE-PROTEIN KINASE RECEPTOR ECK, EPITHELIAL CELL COMPND 6 KINASE, EPHA2; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: NAG ON ASN407, DI-METHYLATION OF LYSINES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GNTI-DEFICIENT; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS TRANSFERASE, ANGIOGENESIS, KINASE, CATARACT, RECEPTOR, APOPTOSIS, KEYWDS 2 GLYCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.SEIRADAKE,K.HARLOS,G.SUTTON,A.R.ARICESCU,E.Y.JONES REVDAT 6 20-DEC-23 2X10 1 HETSYN REVDAT 5 29-JUL-20 2X10 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 28-FEB-18 2X10 1 SOURCE REVDAT 3 30-JAN-13 2X10 1 CAVEAT JRNL REMARK VERSN REVDAT 3 2 1 HET HETNAM FORMUL LINK REVDAT 3 3 1 HETATM ANISOU REVDAT 2 31-MAR-10 2X10 1 REMARK REVDAT 1 16-MAR-10 2X10 0 JRNL AUTH E.SEIRADAKE,K.HARLOS,G.SUTTON,A.R.ARICESCU,E.Y.JONES JRNL TITL AN EXTRACELLULAR STERIC SEEDING MECHANISM FOR EPH-EPHRIN JRNL TITL 2 SIGNALLING PLATFORM ASSEMBLY JRNL REF NAT.STRUCT.MOL.BIOL. V. 17 398 2010 JRNL REFN ISSN 1545-9993 JRNL PMID 20228801 JRNL DOI 10.1038/NSMB.1782 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 12037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9228 - 4.7609 0.98 2876 166 0.2025 0.2711 REMARK 3 2 4.7609 - 3.7794 0.98 2853 159 0.2123 0.2715 REMARK 3 3 3.7794 - 3.3018 0.98 2925 143 0.2644 0.3336 REMARK 3 4 3.3018 - 3.0000 0.96 2789 126 0.3175 0.3963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.25 REMARK 3 B_SOL : 47.95 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -35.95060 REMARK 3 B22 (A**2) : -43.46320 REMARK 3 B33 (A**2) : -33.12400 REMARK 3 B12 (A**2) : 9.82520 REMARK 3 B13 (A**2) : 10.32790 REMARK 3 B23 (A**2) : -5.49030 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3847 REMARK 3 ANGLE : 0.697 5229 REMARK 3 CHIRALITY : 0.045 574 REMARK 3 PLANARITY : 0.003 686 REMARK 3 DIHEDRAL : 16.221 1376 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A) AND (RESID 26:200 OR RESID 1530) REMARK 3 ORIGIN FOR THE GROUP (A): -46.6390 65.5747 16.2097 REMARK 3 T TENSOR REMARK 3 T11: 0.9942 T22: 0.8227 REMARK 3 T33: 0.9079 T12: -0.0506 REMARK 3 T13: -0.0533 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 4.5704 L22: 5.0348 REMARK 3 L33: 6.6082 L12: -0.9017 REMARK 3 L13: -1.2784 L23: -0.2890 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.5809 S13: 0.4026 REMARK 3 S21: 0.9073 S22: 0.0392 S23: -0.1332 REMARK 3 S31: -0.6171 S32: -0.0572 S33: -0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A) AND (RESID 201:435 OR RESID 1531) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6116 12.4873 -16.5074 REMARK 3 T TENSOR REMARK 3 T11: 1.0817 T22: 1.1861 REMARK 3 T33: 1.0386 T12: 0.0361 REMARK 3 T13: 0.0054 T23: 0.0448 REMARK 3 L TENSOR REMARK 3 L11: 1.7424 L22: 2.5179 REMARK 3 L33: 0.9584 L12: -1.5650 REMARK 3 L13: -0.8996 L23: 1.0952 REMARK 3 S TENSOR REMARK 3 S11: -0.1799 S12: 0.1761 S13: -0.1281 REMARK 3 S21: 0.0938 S22: 0.2082 S23: -0.0075 REMARK 3 S31: 0.3181 S32: 0.1621 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 436:529) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3005 -48.6183 -42.0043 REMARK 3 T TENSOR REMARK 3 T11: 1.5296 T22: 1.6056 REMARK 3 T33: 1.1304 T12: -0.1478 REMARK 3 T13: 0.0700 T23: -0.1239 REMARK 3 L TENSOR REMARK 3 L11: 3.2256 L22: 1.2657 REMARK 3 L33: 2.5739 L12: -1.7122 REMARK 3 L13: 0.6932 L23: -0.1642 REMARK 3 S TENSOR REMARK 3 S11: -0.1149 S12: -0.3077 S13: 0.0606 REMARK 3 S21: -0.1193 S22: -0.1064 S23: 0.1562 REMARK 3 S31: -0.3783 S32: -0.7822 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE DATA INCLUDES UP TO 2.75 A REMARK 3 RESOLUTION, FRIEDEL PAIRS UNMERGED. MERGED PAIRS, UP TO 3A REMARK 3 RESOLUTION WERE USED FOR REFINEMENT. REMARK 4 REMARK 4 2X10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1290042002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS, MOSFLM REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23406 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 91.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 1.710 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.22 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 3C8X, 2E7H, 1X5L REMARK 200 REMARK 200 REMARK: USED PHASES FROM MOLECULAR REPLACEMENT DURING SEARCH FOR REMARK 200 SE SITES IN PHASER REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1/3 V/V: PROTEIN, 1/3 V/V: 20 % REMARK 280 POLYETHYLENE GLYCOL 6000, 1 M LICL, 0.1 M TRIS PH 8 1/3 V/V: 0.4 REMARK 280 M NON-DETERGENT SULFOBETAINE 256 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 GLY A 0 REMARK 465 ILE A 1 REMARK 465 LEU A 2 REMARK 465 PRO A 3 REMARK 465 SER A 4 REMARK 465 PRO A 5 REMARK 465 GLY A 6 REMARK 465 MSE A 7 REMARK 465 PRO A 8 REMARK 465 ALA A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 LEU A 13 REMARK 465 VAL A 14 REMARK 465 SER A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 SER A 18 REMARK 465 VAL A 19 REMARK 465 LEU A 20 REMARK 465 LEU A 21 REMARK 465 MSE A 22 REMARK 465 GLY A 23 REMARK 465 CYS A 24 REMARK 465 VAL A 25 REMARK 465 GLY A 38 REMARK 465 GLY A 39 REMARK 465 GLU A 40 REMARK 465 SER A 154 REMARK 465 ASP A 155 REMARK 465 PHE A 156 REMARK 465 GLU A 157 REMARK 465 ALA A 158 REMARK 465 ARG A 159 REMARK 465 HIS A 160 REMARK 465 VAL A 161 REMARK 465 LYS A 162 REMARK 465 CYS A 369 REMARK 465 TRP A 370 REMARK 465 PRO A 371 REMARK 465 GLU A 372 REMARK 465 SER A 373 REMARK 465 GLY A 374 REMARK 465 GLU A 375 REMARK 465 GLU A 530 REMARK 465 GLY A 531 REMARK 465 SER A 532 REMARK 465 GLY A 533 REMARK 465 ASN A 534 REMARK 465 GLY A 535 REMARK 465 THR A 536 REMARK 465 LYS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 26 CB REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 ASP A 61 CG OD1 OD2 REMARK 470 GLU A 380 CG CD OE1 OE2 REMARK 470 ARG A 465 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 515 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 309 CB CYS A 325 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 66 146.55 -172.74 REMARK 500 ASN A 71 63.38 -104.38 REMARK 500 SER A 113 -7.29 -59.94 REMARK 500 ASP A 143 162.52 170.67 REMARK 500 THR A 174 34.24 -153.56 REMARK 500 VAL A 231 150.65 -45.22 REMARK 500 LEU A 254 -84.10 -107.75 REMARK 500 GLU A 270 -116.67 52.11 REMARK 500 SER A 286 -163.38 -121.57 REMARK 500 SER A 306 144.32 -173.03 REMARK 500 ALA A 337 75.36 -152.47 REMARK 500 PRO A 351 155.13 -47.84 REMARK 500 ASP A 359 49.19 -98.51 REMARK 500 GLU A 380 -140.38 -75.90 REMARK 500 ASP A 401 52.11 73.01 REMARK 500 HIS A 405 41.27 70.21 REMARK 500 MSE A 406 116.40 -160.93 REMARK 500 PRO A 439 97.32 -31.38 REMARK 500 GLU A 445 15.93 -141.37 REMARK 500 ILE A 458 132.51 -176.02 REMARK 500 VAL A 466 107.03 -38.40 REMARK 500 ASP A 496 76.14 52.60 REMARK 500 THR A 526 178.89 -59.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 N-ACETYLGLUCOSAMINE: ON ASN 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MQB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPHRIN A2 (EPHA2) RECEPTOR PROTEINKINASE REMARK 900 RELATED ID: 2X11 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLETE EPHA2 ECTODOMAIN IN COMPLEX WITH REMARK 900 EPHRIN A5 RECEPTOR BINDING DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 INCLUDES FOREIGN N-TERMINAL SIGNAL PEPTIDE AND C-TERMINAL REMARK 999 POLY-HIS TAG DBREF 2X10 A -1 26 PDB 2X10 2X10 -1 26 DBREF 2X10 A 27 534 UNP P29317 EPHA2_HUMAN 27 534 DBREF 2X10 A 535 543 PDB 2X10 2X10 535 543 SEQRES 1 A 545 MSE GLY ILE LEU PRO SER PRO GLY MSE PRO ALA LEU LEU SEQRES 2 A 545 SER LEU VAL SER LEU LEU SER VAL LEU LEU MSE GLY CYS SEQRES 3 A 545 VAL ALA LYS GLU VAL VAL LEU LEU ASP PHE ALA ALA ALA SEQRES 4 A 545 GLY GLY GLU LEU GLY TRP LEU THR HIS PRO TYR GLY LYS SEQRES 5 A 545 GLY TRP ASP LEU MSE GLN ASN ILE MSE ASN ASP MSE PRO SEQRES 6 A 545 ILE TYR MSE TYR SER VAL CYS ASN VAL MSE SER GLY ASP SEQRES 7 A 545 GLN ASP ASN TRP LEU ARG THR ASN TRP VAL TYR ARG GLY SEQRES 8 A 545 GLU ALA GLU ARG ILE PHE ILE GLU LEU LYS PHE THR VAL SEQRES 9 A 545 ARG ASP CYS ASN SER PHE PRO GLY GLY ALA SER SER CYS SEQRES 10 A 545 LYS GLU THR PHE ASN LEU TYR TYR ALA GLU SER ASP LEU SEQRES 11 A 545 ASP TYR GLY THR ASN PHE GLN LYS ARG LEU PHE THR LYS SEQRES 12 A 545 ILE ASP THR ILE ALA PRO ASP GLU ILE THR VAL SER SER SEQRES 13 A 545 ASP PHE GLU ALA ARG HIS VAL LYS LEU ASN VAL GLU GLU SEQRES 14 A 545 ARG SER VAL GLY PRO LEU THR ARG LYS GLY PHE TYR LEU SEQRES 15 A 545 ALA PHE GLN ASP ILE GLY ALA CYS VAL ALA LEU LEU SER SEQRES 16 A 545 VAL ARG VAL TYR TYR LYS LYS CYS PRO GLU LEU LEU GLN SEQRES 17 A 545 GLY LEU ALA HIS PHE PRO GLU THR ILE ALA GLY SER ASP SEQRES 18 A 545 ALA PRO SER LEU ALA THR VAL ALA GLY THR CYS VAL ASP SEQRES 19 A 545 HIS ALA VAL VAL PRO PRO GLY GLY GLU GLU PRO ARG MSE SEQRES 20 A 545 HIS CYS ALA VAL ASP GLY GLU TRP LEU VAL PRO ILE GLY SEQRES 21 A 545 GLN CYS LEU CYS GLN ALA GLY TYR GLU LYS VAL GLU ASP SEQRES 22 A 545 ALA CYS GLN ALA CYS SER PRO GLY PHE PHE LYS PHE GLU SEQRES 23 A 545 ALA SER GLU SER PRO CYS LEU GLU CYS PRO GLU HIS THR SEQRES 24 A 545 LEU PRO SER PRO GLU GLY ALA THR SER CYS GLU CYS GLU SEQRES 25 A 545 GLU GLY PHE PHE ARG ALA PRO GLN ASP PRO ALA SER MSE SEQRES 26 A 545 PRO CYS THR ARG PRO PRO SER ALA PRO HIS TYR LEU THR SEQRES 27 A 545 ALA VAL GLY MSE GLY ALA LYS VAL GLU LEU ARG TRP THR SEQRES 28 A 545 PRO PRO GLN ASP SER GLY GLY ARG GLU ASP ILE VAL TYR SEQRES 29 A 545 SER VAL THR CYS GLU GLN CYS TRP PRO GLU SER GLY GLU SEQRES 30 A 545 CYS GLY PRO CYS GLU ALA SER VAL ARG TYR SER GLU PRO SEQRES 31 A 545 PRO HIS GLY LEU THR ARG THR SER VAL THR VAL SER ASP SEQRES 32 A 545 LEU GLU PRO HIS MSE ASN TYR THR PHE THR VAL GLU ALA SEQRES 33 A 545 ARG ASN GLY VAL SER GLY LEU VAL THR SER ARG SER PHE SEQRES 34 A 545 ARG THR ALA SER VAL SER ILE ASN GLN THR GLU PRO PRO SEQRES 35 A 545 LYS VAL ARG LEU GLU GLY ARG SER THR THR SER LEU SER SEQRES 36 A 545 VAL SER TRP SER ILE PRO PRO PRO GLN GLN SER ARG VAL SEQRES 37 A 545 TRP LYS TYR GLU VAL THR TYR ARG LYS LYS GLY ASP SER SEQRES 38 A 545 ASN SER TYR ASN VAL ARG ARG THR GLU GLY PHE SER VAL SEQRES 39 A 545 THR LEU ASP ASP LEU ALA PRO ASP THR THR TYR LEU VAL SEQRES 40 A 545 GLN VAL GLN ALA LEU THR GLN GLU GLY GLN GLY ALA GLY SEQRES 41 A 545 SER LYS VAL HIS GLU PHE GLN THR LEU SER PRO GLU GLY SEQRES 42 A 545 SER GLY ASN GLY THR LYS HIS HIS HIS HIS HIS HIS MODRES 2X10 ASN A 407 ASN GLYCOSYLATION SITE MODRES 2X10 MSE A 55 MET SELENOMETHIONINE MODRES 2X10 MSE A 59 MET SELENOMETHIONINE MODRES 2X10 MSE A 62 MET SELENOMETHIONINE MODRES 2X10 MSE A 66 MET SELENOMETHIONINE MODRES 2X10 MSE A 73 MET SELENOMETHIONINE MODRES 2X10 MSE A 245 MET SELENOMETHIONINE MODRES 2X10 MSE A 323 MET SELENOMETHIONINE MODRES 2X10 MSE A 340 MET SELENOMETHIONINE MODRES 2X10 MSE A 406 MET SELENOMETHIONINE HET MSE A 55 8 HET MSE A 59 8 HET MSE A 62 8 HET MSE A 66 8 HET MSE A 73 8 HET MSE A 245 8 HET MSE A 323 8 HET MSE A 340 8 HET MSE A 406 8 HET CL A1530 1 HET NAG A1531 14 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 CL CL 1- FORMUL 3 NAG C8 H15 N O6 HELIX 1 1 GLN A 135 PHE A 139 5 5 HELIX 2 2 VAL A 418 VAL A 422 5 5 HELIX 3 3 PRO A 459 GLN A 463 5 5 SHEET 1 AA 2 GLU A 28 ASP A 33 0 SHEET 2 AA 2 CYS A 188 CYS A 201 1 O VAL A 196 N LEU A 31 SHEET 1 AB 4 ASP A 53 MSE A 59 0 SHEET 2 AB 4 MSE A 62 CYS A 70 -1 O MSE A 62 N MSE A 59 SHEET 3 AB 4 CYS A 188 CYS A 201 -1 O VAL A 189 N VAL A 69 SHEET 4 AB 4 THR A 214 ILE A 215 1 O THR A 214 N CYS A 201 SHEET 1 AC 5 ASP A 53 MSE A 59 0 SHEET 2 AC 5 MSE A 62 CYS A 70 -1 O MSE A 62 N MSE A 59 SHEET 3 AC 5 CYS A 188 CYS A 201 -1 O VAL A 189 N VAL A 69 SHEET 4 AC 5 ILE A 94 VAL A 102 -1 O PHE A 95 N TYR A 197 SHEET 5 AC 5 ASN A 164 VAL A 170 -1 O ASN A 164 N PHE A 100 SHEET 1 AD 4 ASP A 53 MSE A 59 0 SHEET 2 AD 4 MSE A 62 CYS A 70 -1 O MSE A 62 N MSE A 59 SHEET 3 AD 4 CYS A 188 CYS A 201 -1 O VAL A 189 N VAL A 69 SHEET 4 AD 4 GLU A 28 ASP A 33 1 O VAL A 29 N TYR A 198 SHEET 1 AE 2 THR A 214 ILE A 215 0 SHEET 2 AE 2 CYS A 188 CYS A 201 1 O CYS A 201 N THR A 214 SHEET 1 AF 5 LEU A 44 HIS A 46 0 SHEET 2 AF 5 ASN A 79 ARG A 82 -1 O TRP A 80 N HIS A 46 SHEET 3 AF 5 GLY A 177 ASP A 184 -1 O PHE A 182 N LEU A 81 SHEET 4 AF 5 PHE A 119 SER A 126 -1 O ASN A 120 N GLN A 183 SHEET 5 AF 5 THR A 140 ILE A 145 -1 O THR A 140 N TYR A 123 SHEET 1 AG 4 LEU A 44 HIS A 46 0 SHEET 2 AG 4 ASN A 79 ARG A 82 -1 O TRP A 80 N HIS A 46 SHEET 3 AG 4 GLY A 177 ASP A 184 -1 O PHE A 182 N LEU A 81 SHEET 4 AG 4 VAL A 86 TYR A 87 1 O VAL A 86 N PHE A 178 SHEET 1 AH 3 LEU A 204 GLN A 206 0 SHEET 2 AH 3 ALA A 209 PHE A 211 -1 O ALA A 209 N GLN A 206 SHEET 3 AH 3 THR A 229 CYS A 230 -1 O THR A 229 N HIS A 210 SHEET 1 AI 2 VAL A 226 ALA A 227 0 SHEET 2 AI 2 ARG A 244 MSE A 245 -1 O MSE A 245 N VAL A 226 SHEET 1 AJ 2 ALA A 234 VAL A 235 0 SHEET 2 AJ 2 LEU A 261 CYS A 262 -1 O LEU A 261 N VAL A 235 SHEET 1 AK 2 TYR A 266 VAL A 269 0 SHEET 2 AK 2 ALA A 272 ALA A 275 -1 O ALA A 272 N VAL A 269 SHEET 1 AL 2 PHE A 280 PHE A 281 0 SHEET 2 AL 2 LEU A 291 GLU A 292 -1 O LEU A 291 N PHE A 281 SHEET 1 AM 4 LEU A 335 VAL A 338 0 SHEET 2 AM 4 VAL A 344 TRP A 348 -1 N GLU A 345 O VAL A 338 SHEET 3 AM 4 SER A 396 SER A 400 -1 O VAL A 397 N LEU A 346 SHEET 4 AM 4 ARG A 384 TYR A 385 -1 O ARG A 384 N SER A 400 SHEET 1 AN 4 HIS A 390 LEU A 392 0 SHEET 2 AN 4 VAL A 361 GLU A 367 -1 O TYR A 362 N LEU A 392 SHEET 3 AN 4 TYR A 408 ARG A 415 -1 O THR A 409 N GLU A 367 SHEET 4 AN 4 PHE A 427 VAL A 432 -1 O ARG A 428 N VAL A 412 SHEET 1 AO 3 LYS A 441 ARG A 447 0 SHEET 2 AO 3 LEU A 452 SER A 457 -1 O SER A 453 N GLU A 445 SHEET 3 AO 3 SER A 491 LEU A 494 -1 O VAL A 492 N VAL A 454 SHEET 1 AP 4 ASN A 483 THR A 487 0 SHEET 2 AP 4 LYS A 468 LYS A 475 -1 O TYR A 469 N THR A 487 SHEET 3 AP 4 THR A 502 LEU A 510 -1 O LEU A 504 N ARG A 474 SHEET 4 AP 4 ALA A 517 GLY A 518 -1 O ALA A 517 N ALA A 509 SHEET 1 AQ 4 ASN A 483 THR A 487 0 SHEET 2 AQ 4 LYS A 468 LYS A 475 -1 O TYR A 469 N THR A 487 SHEET 3 AQ 4 THR A 502 LEU A 510 -1 O LEU A 504 N ARG A 474 SHEET 4 AQ 4 HIS A 522 GLN A 525 -1 O HIS A 522 N VAL A 505 SHEET 1 AR 2 ALA A 517 GLY A 518 0 SHEET 2 AR 2 THR A 502 LEU A 510 -1 O ALA A 509 N ALA A 517 SSBOND 1 CYS A 70 CYS A 188 1555 1555 2.03 SSBOND 2 CYS A 105 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 201 CYS A 247 1555 1555 2.02 SSBOND 4 CYS A 230 CYS A 260 1555 1555 2.03 SSBOND 5 CYS A 262 CYS A 273 1555 1555 2.03 SSBOND 6 CYS A 276 CYS A 290 1555 1555 2.03 SSBOND 7 CYS A 293 CYS A 307 1555 1555 2.03 SSBOND 8 CYS A 309 CYS A 325 1555 1555 2.02 SSBOND 9 CYS A 366 CYS A 379 1555 1555 2.03 LINK C LEU A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N GLN A 56 1555 1555 1.33 LINK C ILE A 58 N MSE A 59 1555 1555 1.33 LINK C MSE A 59 N ASN A 60 1555 1555 1.33 LINK C ASP A 61 N MSE A 62 1555 1555 1.33 LINK C MSE A 62 N PRO A 63 1555 1555 1.34 LINK C TYR A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N TYR A 67 1555 1555 1.33 LINK C VAL A 72 N MSE A 73 1555 1555 1.33 LINK C MSE A 73 N SER A 74 1555 1555 1.33 LINK C ARG A 244 N MSE A 245 1555 1555 1.33 LINK C MSE A 245 N HIS A 246 1555 1555 1.33 LINK C SER A 322 N MSE A 323 1555 1555 1.33 LINK C MSE A 323 N PRO A 324 1555 1555 1.34 LINK C GLY A 339 N MSE A 340 1555 1555 1.33 LINK C MSE A 340 N GLY A 341 1555 1555 1.33 LINK C HIS A 405 N MSE A 406 1555 1555 1.33 LINK C MSE A 406 N ASN A 407 1555 1555 1.33 LINK ND2 ASN A 407 C1 NAG A1531 1555 1555 1.44 CISPEP 1 HIS A 46 PRO A 47 0 -1.70 CISPEP 2 GLY A 171 PRO A 172 0 0.62 CISPEP 3 PRO A 238 GLY A 239 0 -2.25 CISPEP 4 THR A 437 GLU A 438 0 -0.75 CISPEP 5 THR A 511 GLN A 512 0 -4.02 CRYST1 41.920 44.650 93.420 93.02 98.22 112.12 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023855 0.009696 0.004604 0.00000 SCALE2 0.000000 0.024176 0.002828 0.00000 SCALE3 0.000000 0.000000 0.010889 0.00000