PDB Short entry for 2XWD HEADER HYDROLASE 01-NOV-10 2XWD TITLE X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6O-(N'-(N-OCTYL) TITLE 2 IMINO)NOJIRIMYCIN IN THE ACTIVE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSYLCERAMIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ACID-BETA-GLUCOSIDASE, ALGLUCERASE, BETA-GLUCOCEREBROSIDASE, COMPND 5 D-GLUCOSYL-N-ACYLSPHINGOSINE GLUCOHYDROLASE, IMIGLUCERASE; COMPND 6 EC: 3.2.1.45; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: DAUCUS CAROTA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CARROT; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4039 KEYWDS GLUCOCEREBROSIDASE, HYDROLASE, GAUCHER DISEASE, SPHINGOLIPID KEYWDS 2 METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR B.BRUMSHTEIN,M.AGUILAR-MONCAYO,J.M.BENITO,C.ORTIZ MELLET,J.M.GARCIA AUTHOR 2 FERNANDEZ,I.SILMAN,Y.SHAALTIEL,J.L.SUSSMAN,A.H.FUTERMAN REVDAT 3 20-DEC-23 2XWD 1 HETSYN LINK REVDAT 2 29-JUL-20 2XWD 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 14-SEP-11 2XWD 0 JRNL AUTH B.BRUMSHTEIN,M.AGUILAR-MONCAYO,J.M.BENITO, JRNL AUTH 2 J.M.GARCIA FERNANDEZ,I.SILMAN,Y.SHAALTIEL,D.AVIEZER, JRNL AUTH 3 J.L.SUSSMAN,A.H.FUTERMAN,C.ORTIZ MELLET JRNL TITL CYCLODEXTRIN-MEDIATED CRYSTALLIZATION OF ACID JRNL TITL 2 BETA-GLUCOSIDASE IN COMPLEX WITH AMPHIPHILIC BICYCLIC JRNL TITL 3 NOJIRIMYCIN ANALOGUES. JRNL REF ORG.BIOMOL.CHEM. V. 9 4160 2011 JRNL REFN ISSN 1477-0520 JRNL PMID 21483943 JRNL DOI 10.1039/C1OB05200D REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 28378 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1510 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1821 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7721 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 180 REMARK 3 SOLVENT ATOMS : 266 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.319 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.711 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8155 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11126 ; 1.581 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 981 ; 6.731 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 348 ;37.490 ;23.448 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1213 ;16.240 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;20.043 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1232 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6162 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4916 ; 0.689 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7926 ; 1.349 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3239 ; 2.110 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3200 ; 3.368 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 8 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A -1 A 25 3 REMARK 3 1 B -1 B 25 3 REMARK 3 2 A 27 A 50 3 REMARK 3 2 B 27 B 50 3 REMARK 3 3 A 65 A 168 3 REMARK 3 3 B 65 B 168 3 REMARK 3 4 A 170 A 311 3 REMARK 3 4 B 170 B 311 3 REMARK 3 5 A 320 A 340 3 REMARK 3 5 B 320 B 340 3 REMARK 3 6 A 360 A 395 3 REMARK 3 6 B 360 B 395 3 REMARK 3 7 A 400 A 449 3 REMARK 3 7 B 400 B 449 3 REMARK 3 8 A 456 A 497 3 REMARK 3 8 B 456 B 497 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1756 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 1756 ; 0.05 ; 0.05 REMARK 3 LOOSE POSITIONAL 1 A (A): 1666 ; 0.07 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 1666 ; 0.07 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 1756 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 1756 ; 0.12 ; 0.50 REMARK 3 LOOSE THERMAL 1 A (A**2): 1666 ; 0.15 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 1666 ; 0.15 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2XWD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1290046040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : PT COATED SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28378 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 29.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2J25 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M (NH4)2SO4, 0.1 M TRIS PH 6.5, 25% REMARK 280 W/V PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.30850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A -1 REMARK 465 ASP A 27 REMARK 465 PRO A 28 REMARK 465 PRO A 29 REMARK 465 THR A 30 REMARK 465 PHE A 31 REMARK 465 LEU A 498 REMARK 465 LEU A 499 REMARK 465 VAL A 500 REMARK 465 ASP A 501 REMARK 465 THR A 502 REMARK 465 MET A 503 REMARK 465 GLU B -1 REMARK 465 ASP B 27 REMARK 465 PRO B 28 REMARK 465 PRO B 29 REMARK 465 THR B 30 REMARK 465 PHE B 31 REMARK 465 PRO B 32 REMARK 465 LEU B 498 REMARK 465 LEU B 499 REMARK 465 VAL B 500 REMARK 465 ASP B 501 REMARK 465 THR B 502 REMARK 465 MET B 503 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 34 CG CD1 CD2 REMARK 470 GLN A 143 CG CD OE1 NE2 REMARK 470 LYS A 155 CE NZ REMARK 470 ARG A 163 NE CZ NH1 NH2 REMARK 470 ARG A 277 NE CZ NH1 NH2 REMARK 470 GLU A 300 CG CD OE1 OE2 REMARK 470 LYS A 321 CE NZ REMARK 470 LYS A 346 CE NZ REMARK 470 PHE A 347 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 441 CD CE NZ REMARK 470 LYS A 466 CE NZ REMARK 470 GLN A 497 CG CD OE1 NE2 REMARK 470 PHE B 0 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 34 CG CD1 CD2 REMARK 470 GLU B 111 CG CD OE1 OE2 REMARK 470 LYS B 155 CG CD CE NZ REMARK 470 LYS B 441 CD CE NZ REMARK 470 ARG B 463 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 466 CD CE NZ REMARK 470 GLN B 497 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 743 O HOH A 830 1.84 REMARK 500 O HOH A 796 O HOH A 813 2.00 REMARK 500 O HOH B 808 O HOH B 823 2.05 REMARK 500 OG SER B 12 O3 SO4 B 605 2.09 REMARK 500 O HOH A 797 O HOH A 834 2.09 REMARK 500 O HOH B 776 O HOH B 812 2.13 REMARK 500 O HOH B 788 O HOH B 828 2.15 REMARK 500 O4 NAG C 1 O5 NAG C 2 2.15 REMARK 500 O HOH B 810 O HOH B 811 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 111 CB GLU A 111 CG 0.136 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 218 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 75 -134.77 -122.92 REMARK 500 ALA A 124 -161.96 69.04 REMARK 500 ASN A 146 32.39 -95.55 REMARK 500 LEU A 156 -72.35 -106.22 REMARK 500 ASN A 192 -164.32 -115.78 REMARK 500 GLU A 233 135.13 166.17 REMARK 500 LEU A 249 109.00 -160.70 REMARK 500 LEU A 281 -82.05 68.92 REMARK 500 THR A 323 -73.39 -118.01 REMARK 500 SER A 356 108.49 -57.60 REMARK 500 TRP A 381 -141.65 -79.18 REMARK 500 ASN A 382 126.81 -39.85 REMARK 500 VAL A 477 -35.84 -141.45 REMARK 500 TYR A 487 -12.46 68.37 REMARK 500 ASN B 19 -158.45 -140.31 REMARK 500 PHE B 75 -130.12 -123.09 REMARK 500 ALA B 124 -166.50 67.78 REMARK 500 ASN B 146 30.87 -93.65 REMARK 500 LEU B 156 -73.31 -108.74 REMARK 500 ASN B 192 -163.87 -120.94 REMARK 500 SER B 196 -169.75 -129.04 REMARK 500 GLU B 233 130.91 170.54 REMARK 500 TYR B 244 125.85 -38.60 REMARK 500 LEU B 249 112.24 -161.08 REMARK 500 LEU B 281 -77.51 68.04 REMARK 500 ALA B 318 86.00 -151.65 REMARK 500 THR B 323 -75.88 -114.51 REMARK 500 HIS B 374 0.38 81.19 REMARK 500 TRP B 381 -142.97 -85.02 REMARK 500 ASN B 382 121.01 -35.44 REMARK 500 VAL B 477 -36.33 -139.97 REMARK 500 TYR B 487 -12.41 74.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LGS A 610 REMARK 610 LGS B 610 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AC" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BC" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Y7V RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF HUMAN ACID-BETA-GLUCOSIDASE COVALENTLYBOUND TO REMARK 900 CONDURITOL B EPOXIDE REMARK 900 RELATED ID: 2F61 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PARTIALLY DEGLYCOSYLATED ACID BETA- GLUCOSIDASE REMARK 900 RELATED ID: 2V3F RELATED DB: PDB REMARK 900 ACID-BETA-GLUCOSIDASE PRODUCED IN CARROT REMARK 900 RELATED ID: 2J25 RELATED DB: PDB REMARK 900 PARTIALLY DEGLYCOSYLATED GLUCOCERAMIDASE REMARK 900 RELATED ID: 2V3E RELATED DB: PDB REMARK 900 ACID-BETA-GLUCOSIDASE WITH N-NONYL-DEOXYNOJIRIMYCIN REMARK 900 RELATED ID: 2WKL RELATED DB: PDB REMARK 900 VELAGLUCERASE ALFA REMARK 900 RELATED ID: 2V3D RELATED DB: PDB REMARK 900 ACID-BETA-GLUCOSIDASE WITH N-BUTYL-DEOXYNOJIRIMYCIN REMARK 900 RELATED ID: 1OGS RELATED DB: PDB REMARK 900 HUMAN ACID-BETA-GLUCOSIDASE REMARK 900 RELATED ID: 2XWE RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6S -(N'-(N-OCTYL) REMARK 900 IMINO)-6-THIONOJIRIMYCIN IN THE ACTIVE SITE REMARK 900 RELATED ID: 2WCG RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH N- OCTYL(CYCLIC REMARK 900 GUANIDINE)-NOJIRIMYCIN IN THE ACTIVE SITE DBREF 2XWD A 1 497 UNP P04062 GLCM_HUMAN 20 516 DBREF 2XWD B 1 497 UNP P04062 GLCM_HUMAN 20 516 SEQADV 2XWD GLU A -1 UNP P04062 EXPRESSION TAG SEQADV 2XWD PHE A 0 UNP P04062 EXPRESSION TAG SEQADV 2XWD HIS A 495 UNP P04062 ARG 514 VARIANT SEQADV 2XWD LEU A 498 UNP P04062 EXPRESSION TAG SEQADV 2XWD LEU A 499 UNP P04062 EXPRESSION TAG SEQADV 2XWD VAL A 500 UNP P04062 EXPRESSION TAG SEQADV 2XWD ASP A 501 UNP P04062 EXPRESSION TAG SEQADV 2XWD THR A 502 UNP P04062 EXPRESSION TAG SEQADV 2XWD MET A 503 UNP P04062 EXPRESSION TAG SEQADV 2XWD GLU B -1 UNP P04062 EXPRESSION TAG SEQADV 2XWD PHE B 0 UNP P04062 EXPRESSION TAG SEQADV 2XWD HIS B 495 UNP P04062 ARG 514 VARIANT SEQADV 2XWD LEU B 498 UNP P04062 EXPRESSION TAG SEQADV 2XWD LEU B 499 UNP P04062 EXPRESSION TAG SEQADV 2XWD VAL B 500 UNP P04062 EXPRESSION TAG SEQADV 2XWD ASP B 501 UNP P04062 EXPRESSION TAG SEQADV 2XWD THR B 502 UNP P04062 EXPRESSION TAG SEQADV 2XWD MET B 503 UNP P04062 EXPRESSION TAG SEQRES 1 A 505 GLU PHE ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SEQRES 2 A 505 SER SER VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SEQRES 3 A 505 SER PHE ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SEQRES 4 A 505 SER ARG TYR GLU SER THR ARG SER GLY ARG ARG MET GLU SEQRES 5 A 505 LEU SER MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR SEQRES 6 A 505 GLY LEU LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN SEQRES 7 A 505 LYS VAL LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA SEQRES 8 A 505 ALA LEU ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN SEQRES 9 A 505 LEU LEU LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY SEQRES 10 A 505 TYR ASN ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SEQRES 11 A 505 SER ILE ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP SEQRES 12 A 505 PHE GLN LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR SEQRES 13 A 505 LYS LEU LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU SEQRES 14 A 505 ALA GLN ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SEQRES 15 A 505 SER PRO THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY SEQRES 16 A 505 LYS GLY SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS SEQRES 17 A 505 GLN THR TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA SEQRES 18 A 505 TYR ALA GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA SEQRES 19 A 505 GLU ASN GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO SEQRES 20 A 505 PHE GLN CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP SEQRES 21 A 505 PHE ILE ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER SEQRES 22 A 505 THR HIS HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN SEQRES 23 A 505 ARG LEU LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR SEQRES 24 A 505 ASP PRO GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL SEQRES 25 A 505 HIS TRP TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR SEQRES 26 A 505 LEU GLY GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU SEQRES 27 A 505 PHE ALA SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU SEQRES 28 A 505 GLN SER VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN SEQRES 29 A 505 TYR SER HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL SEQRES 30 A 505 VAL GLY TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU SEQRES 31 A 505 GLY GLY PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO SEQRES 32 A 505 ILE ILE VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN SEQRES 33 A 505 PRO MET PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE SEQRES 34 A 505 PRO GLU GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN SEQRES 35 A 505 LYS ASN ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP SEQRES 36 A 505 GLY SER ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS SEQRES 37 A 505 ASP VAL PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE SEQRES 38 A 505 LEU GLU THR ILE SER PRO GLY TYR SER ILE HIS THR TYR SEQRES 39 A 505 LEU TRP HIS ARG GLN LEU LEU VAL ASP THR MET SEQRES 1 B 505 GLU PHE ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SEQRES 2 B 505 SER SER VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SEQRES 3 B 505 SER PHE ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SEQRES 4 B 505 SER ARG TYR GLU SER THR ARG SER GLY ARG ARG MET GLU SEQRES 5 B 505 LEU SER MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR SEQRES 6 B 505 GLY LEU LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN SEQRES 7 B 505 LYS VAL LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA SEQRES 8 B 505 ALA LEU ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN SEQRES 9 B 505 LEU LEU LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY SEQRES 10 B 505 TYR ASN ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SEQRES 11 B 505 SER ILE ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP SEQRES 12 B 505 PHE GLN LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR SEQRES 13 B 505 LYS LEU LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU SEQRES 14 B 505 ALA GLN ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SEQRES 15 B 505 SER PRO THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY SEQRES 16 B 505 LYS GLY SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS SEQRES 17 B 505 GLN THR TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA SEQRES 18 B 505 TYR ALA GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA SEQRES 19 B 505 GLU ASN GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO SEQRES 20 B 505 PHE GLN CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP SEQRES 21 B 505 PHE ILE ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER SEQRES 22 B 505 THR HIS HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN SEQRES 23 B 505 ARG LEU LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR SEQRES 24 B 505 ASP PRO GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL SEQRES 25 B 505 HIS TRP TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR SEQRES 26 B 505 LEU GLY GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU SEQRES 27 B 505 PHE ALA SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU SEQRES 28 B 505 GLN SER VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN SEQRES 29 B 505 TYR SER HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL SEQRES 30 B 505 VAL GLY TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU SEQRES 31 B 505 GLY GLY PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO SEQRES 32 B 505 ILE ILE VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN SEQRES 33 B 505 PRO MET PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE SEQRES 34 B 505 PRO GLU GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN SEQRES 35 B 505 LYS ASN ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP SEQRES 36 B 505 GLY SER ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS SEQRES 37 B 505 ASP VAL PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE SEQRES 38 B 505 LEU GLU THR ILE SER PRO GLY TYR SER ILE HIS THR TYR SEQRES 39 B 505 LEU TRP HIS ARG GLN LEU LEU VAL ASP THR MET MODRES 2XWD ASN A 19 ASN GLYCOSYLATION SITE MODRES 2XWD ASN B 19 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET FUC C 4 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET FUC D 4 10 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HET SO4 A 608 5 HET SO4 A 609 5 HET LGS A 610 16 HET SO4 B 605 5 HET SO4 B 606 5 HET SO4 B 607 5 HET SO4 B 608 5 HET SO4 B 609 5 HET LGS B 610 32 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETNAM LGS (3Z,5S,6R,7S,8R,8AR)-3-(OCTYLIMINO)HEXAHYDRO[1, HETNAM 2 LGS 3]OXAZOLO[3,4-A]PYRIDINE-5,6,7,8-TETROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 MAN C6 H12 O6 FORMUL 3 FUC 2(C6 H12 O5) FORMUL 4 BMA C6 H12 O6 FORMUL 5 SO4 10(O4 S 2-) FORMUL 10 LGS 2(C15 H28 N2 O5) FORMUL 17 HOH *266(H2 O) HELIX 1 AA1 THR A 86 ALA A 95 1 10 HELIX 2 AA2 SER A 97 SER A 110 1 14 HELIX 3 AA3 PRO A 150 LYS A 155 1 6 HELIX 4 AA4 LEU A 156 ALA A 168 1 13 HELIX 5 AA5 PRO A 182 LYS A 186 5 5 HELIX 6 AA6 ASP A 203 HIS A 223 1 21 HELIX 7 AA7 SER A 237 LEU A 241 5 5 HELIX 8 AA8 THR A 252 ASP A 263 1 12 HELIX 9 AA9 ASP A 263 ASN A 270 1 8 HELIX 10 AB1 LEU A 286 LEU A 288 5 3 HELIX 11 AB2 PRO A 289 THR A 297 1 9 HELIX 12 AB3 ASP A 298 LYS A 303 1 6 HELIX 13 AB4 LEU A 314 ALA A 318 5 5 HELIX 14 AB5 PRO A 319 PHE A 331 1 13 HELIX 15 AB6 SER A 356 TYR A 373 1 18 HELIX 16 AB7 ILE A 406 ASP A 409 5 4 HELIX 17 AB8 GLN A 414 LYS A 425 1 12 HELIX 18 AB9 THR B 86 ALA B 95 1 10 HELIX 19 AC1 SER B 97 SER B 110 1 14 HELIX 20 AC2 PRO B 150 LYS B 155 1 6 HELIX 21 AC3 LEU B 156 ALA B 168 1 13 HELIX 22 AC4 PRO B 182 LYS B 186 5 5 HELIX 23 AC5 ASP B 203 HIS B 223 1 21 HELIX 24 AC6 SER B 237 LEU B 241 5 5 HELIX 25 AC7 THR B 252 ASP B 263 1 12 HELIX 26 AC8 ASP B 263 ASN B 270 1 8 HELIX 27 AC9 LEU B 286 LEU B 288 5 3 HELIX 28 AD1 PRO B 289 THR B 297 1 9 HELIX 29 AD2 ASP B 298 LYS B 303 1 6 HELIX 30 AD3 LEU B 314 ALA B 318 5 5 HELIX 31 AD4 THR B 323 PHE B 331 1 9 HELIX 32 AD5 SER B 356 LEU B 372 1 17 HELIX 33 AD6 ILE B 406 ASP B 409 5 4 HELIX 34 AD7 GLN B 414 LYS B 425 1 12 SHEET 1 AA1 4 PRO A 6 LYS A 7 0 SHEET 2 AA1 4 VAL A 15 CYS A 18 -1 O VAL A 15 N LYS A 7 SHEET 3 AA1 4 THR A 410 LYS A 413 -1 O LYS A 413 N CYS A 16 SHEET 4 AA1 4 ILE A 402 ASP A 405 -1 N ILE A 403 O TYR A 412 SHEET 1 AA2 9 GLU A 50 PRO A 55 0 SHEET 2 AA2 9 THR A 36 SER A 42 -1 N ARG A 39 O SER A 52 SHEET 3 AA2 9 ILE A 489 TRP A 494 -1 O ILE A 489 N SER A 42 SHEET 4 AA2 9 ALA A 456 ASN A 462 -1 N VAL A 458 O TYR A 492 SHEET 5 AA2 9 LEU A 444 MET A 450 -1 N LEU A 449 O VAL A 457 SHEET 6 AA2 9 GLN A 432 ALA A 438 -1 N GLN A 432 O MET A 450 SHEET 7 AA2 9 LEU A 65 LYS A 77 -1 N THR A 68 O VAL A 437 SHEET 8 AA2 9 VAL A 468 ASP A 474 1 O THR A 471 N LEU A 67 SHEET 9 AA2 9 GLY A 478 SER A 484 -1 O SER A 484 N VAL A 468 SHEET 1 AA3 9 GLY A 80 ALA A 84 0 SHEET 2 AA3 9 ILE A 118 MET A 123 1 O ARG A 120 N GLY A 83 SHEET 3 AA3 9 SER A 173 PRO A 178 1 O LEU A 175 N VAL A 121 SHEET 4 AA3 9 PHE A 227 THR A 231 1 O THR A 231 N ALA A 176 SHEET 5 AA3 9 ARG A 277 GLN A 284 1 O LEU A 279 N VAL A 230 SHEET 6 AA3 9 VAL A 305 HIS A 311 1 O ALA A 309 N MET A 280 SHEET 7 AA3 9 MET A 335 GLU A 340 1 O MET A 335 N ILE A 308 SHEET 8 AA3 9 VAL A 375 ASN A 382 1 O VAL A 376 N LEU A 336 SHEET 9 AA3 9 GLY A 80 ALA A 84 1 N GLY A 82 O ASP A 380 SHEET 1 AA4 4 PRO B 6 LYS B 7 0 SHEET 2 AA4 4 VAL B 15 CYS B 18 -1 O VAL B 15 N LYS B 7 SHEET 3 AA4 4 THR B 410 LYS B 413 -1 O LYS B 413 N CYS B 16 SHEET 4 AA4 4 ILE B 402 ASP B 405 -1 N ILE B 403 O TYR B 412 SHEET 1 AA5 9 GLU B 50 PRO B 55 0 SHEET 2 AA5 9 THR B 36 SER B 42 -1 N GLU B 41 O GLU B 50 SHEET 3 AA5 9 ILE B 489 TRP B 494 -1 O ILE B 489 N SER B 42 SHEET 4 AA5 9 ALA B 456 ASN B 462 -1 N ALA B 456 O TRP B 494 SHEET 5 AA5 9 LEU B 444 MET B 450 -1 N ASP B 445 O LEU B 461 SHEET 6 AA5 9 GLN B 432 ALA B 438 -1 N GLN B 432 O MET B 450 SHEET 7 AA5 9 LEU B 65 LYS B 77 -1 N THR B 68 O VAL B 437 SHEET 8 AA5 9 VAL B 468 ASP B 474 1 O THR B 471 N LEU B 67 SHEET 9 AA5 9 GLY B 478 SER B 484 -1 O SER B 484 N VAL B 468 SHEET 1 AA6 9 GLY B 80 ALA B 84 0 SHEET 2 AA6 9 ILE B 118 MET B 123 1 O ARG B 120 N GLY B 83 SHEET 3 AA6 9 SER B 173 PRO B 178 1 O SER B 177 N MET B 123 SHEET 4 AA6 9 ALA B 229 THR B 231 1 O THR B 231 N ALA B 176 SHEET 5 AA6 9 ARG B 277 GLN B 284 1 O LEU B 279 N VAL B 230 SHEET 6 AA6 9 GLY B 307 HIS B 311 1 O ALA B 309 N MET B 280 SHEET 7 AA6 9 MET B 335 GLU B 340 1 O MET B 335 N ILE B 308 SHEET 8 AA6 9 VAL B 375 ASN B 382 1 O VAL B 376 N LEU B 336 SHEET 9 AA6 9 GLY B 80 ALA B 84 1 N GLY B 82 O ASP B 380 SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.12 SSBOND 2 CYS A 18 CYS A 23 1555 1555 2.17 SSBOND 3 CYS B 4 CYS B 16 1555 1555 2.06 SSBOND 4 CYS B 18 CYS B 23 1555 1555 2.14 LINK ND2 ASN A 19 C1 NAG C 1 1555 1555 1.40 LINK ND2 ASN B 19 C1 NAG D 1 1555 1555 1.40 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.40 LINK O3 NAG C 1 C1 FUC C 4 1555 1555 1.45 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.41 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.41 LINK O3 NAG D 1 C1 FUC D 4 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.41 CISPEP 1 LEU A 288 PRO A 289 0 1.93 CISPEP 2 GLY A 390 PRO A 391 0 1.97 CISPEP 3 LEU B 288 PRO B 289 0 -0.61 CISPEP 4 GLY B 390 PRO B 391 0 5.55 CRYST1 68.036 96.617 83.164 90.00 103.69 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014698 0.000000 0.003580 0.00000 SCALE2 0.000000 0.010350 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012376 0.00000