PDB Short entry for 2Y73 HEADER OXIDOREDUCTASE 28-JAN-11 2Y73 TITLE THE NATIVE STRUCTURES OF SOLUBLE HUMAN PRIMARY AMINE OXIDASE AOC3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE PRIMARY AMINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AMINE OXIDASE COPPER CONTAINING 3, COPPER AMINE OXIDASE, COMPND 5 HPAO, SEMICARBAZIDE-SENSITIVE AMINE OXIDASE, SSAO, VASCULAR ADHESION COMPND 6 PROTEIN 1, VAP-1; COMPND 7 EC: 1.4.3.21 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.ELOVAARA,H.KIDRON,V.PARKASH,Y.NYMALM,E.BLIGT,P.OLLIKKA,D.J.SMITH, AUTHOR 2 M.PIHLAVISTO,M.SALMI,S.JALKANEN,T.A.SALMINEN REVDAT 5 20-DEC-23 2Y73 1 HETSYN REVDAT 4 29-JUL-20 2Y73 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 12-JUL-17 2Y73 1 REVDAT 2 10-AUG-11 2Y73 1 JRNL REMARK VERSN REVDAT 1 15-JUN-11 2Y73 0 JRNL AUTH H.ELOVAARA,H.KIDRON,V.PARKASH,Y.NYMALM,E.BLIGT,P.OLLIKKA, JRNL AUTH 2 D.J.SMITH,M.PIHLAVISTO,M.SALMI,S.JALKANEN,T.A.SALMINEN JRNL TITL IDENTIFICATION OF TWO IMIDAZOLE BINDING SITES AND KEY JRNL TITL 2 RESIDUES FOR SUBSTRATE SPECIFICITY IN HUMAN PRIMARY AMINE JRNL TITL 3 OXIDASE AOC3. JRNL REF BIOCHEMISTRY V. 50 5507 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21585208 JRNL DOI 10.1021/BI200117Z REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 99551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9312 - 5.5648 1.00 9914 522 0.1566 0.1715 REMARK 3 2 5.5648 - 4.4329 1.00 9586 505 0.1100 0.1413 REMARK 3 3 4.4329 - 3.8772 1.00 9485 499 0.1214 0.1568 REMARK 3 4 3.8772 - 3.5249 1.00 9437 497 0.1493 0.1988 REMARK 3 5 3.5249 - 3.2734 1.00 9407 495 0.1773 0.2270 REMARK 3 6 3.2734 - 3.0812 1.00 9387 494 0.2054 0.2570 REMARK 3 7 3.0812 - 2.9273 1.00 9340 492 0.2439 0.2884 REMARK 3 8 2.9273 - 2.8003 1.00 9368 493 0.2572 0.2968 REMARK 3 9 2.8003 - 2.6927 1.00 9312 490 0.2714 0.3101 REMARK 3 10 2.6927 - 2.6000 1.00 9337 491 0.2996 0.3426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 20.63 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.75690 REMARK 3 B22 (A**2) : -0.75690 REMARK 3 B33 (A**2) : 1.51370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 11695 REMARK 3 ANGLE : 1.776 15949 REMARK 3 CHIRALITY : 0.103 1704 REMARK 3 PLANARITY : 0.012 2082 REMARK 3 DIHEDRAL : 25.951 4389 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Y73 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1290047062. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 183 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90590 REMARK 200 MONOCHROMATOR : SINGLE ASYMMETRICALLY CUT REMARK 200 SI(111) CRYSTAL WITH HORIZONTAL REMARK 200 DIFFRACTION PLANE REMARK 200 OPTICS : VERTICALLY FOCUSING CYLINDRICAL REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH SX-165 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99745 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 29.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.90 REMARK 200 R MERGE FOR SHELL (I) : 0.05000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1US1 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.7 M POTASSIUM/SODIUM TARTRATE, 100 REMARK 280 MM IMIDAZOLE PH7.4, 200 MM NACL, 2M SODIUM FORMATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 144.65667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.32833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.49250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 36.16417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 180.82083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 144.65667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 72.32833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.16417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 108.49250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 180.82083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 3 REMARK 465 LYS A 4 REMARK 465 THR A 5 REMARK 465 ILE A 6 REMARK 465 LEU A 7 REMARK 465 VAL A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 ILE A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 VAL A 14 REMARK 465 ILE A 15 REMARK 465 THR A 16 REMARK 465 ILE A 17 REMARK 465 PHE A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 VAL A 21 REMARK 465 CYS A 22 REMARK 465 VAL A 23 REMARK 465 LEU A 24 REMARK 465 LEU A 25 REMARK 465 VAL A 26 REMARK 465 GLY A 27 REMARK 465 ARG A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 ASP A 31 REMARK 465 GLY A 32 REMARK 465 GLY A 33 REMARK 465 GLU A 34 REMARK 465 PRO A 35 REMARK 465 SER A 36 REMARK 465 GLN A 37 REMARK 465 LEU A 38 REMARK 465 PRO A 39 REMARK 465 HIS A 40 REMARK 465 CYS A 41 REMARK 465 PRO A 42 REMARK 465 SER A 43 REMARK 465 VAL A 44 REMARK 465 SER A 45 REMARK 465 PRO A 46 REMARK 465 SER A 47 REMARK 465 ALA A 48 REMARK 465 GLN A 49 REMARK 465 PRO A 50 REMARK 465 TRP A 51 REMARK 465 THR A 52 REMARK 465 HIS A 53 REMARK 465 PRO A 54 REMARK 465 HIS A 203 REMARK 465 ARG A 204 REMARK 465 GLY A 205 REMARK 465 ASN A 763 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLN B 3 REMARK 465 LYS B 4 REMARK 465 THR B 5 REMARK 465 ILE B 6 REMARK 465 LEU B 7 REMARK 465 VAL B 8 REMARK 465 LEU B 9 REMARK 465 LEU B 10 REMARK 465 ILE B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 465 VAL B 14 REMARK 465 ILE B 15 REMARK 465 THR B 16 REMARK 465 ILE B 17 REMARK 465 PHE B 18 REMARK 465 ALA B 19 REMARK 465 LEU B 20 REMARK 465 VAL B 21 REMARK 465 CYS B 22 REMARK 465 VAL B 23 REMARK 465 LEU B 24 REMARK 465 LEU B 25 REMARK 465 VAL B 26 REMARK 465 GLY B 27 REMARK 465 ARG B 28 REMARK 465 GLY B 29 REMARK 465 GLY B 30 REMARK 465 ASP B 31 REMARK 465 GLY B 32 REMARK 465 GLY B 33 REMARK 465 GLU B 34 REMARK 465 PRO B 35 REMARK 465 SER B 36 REMARK 465 GLN B 37 REMARK 465 LEU B 38 REMARK 465 PRO B 39 REMARK 465 HIS B 40 REMARK 465 CYS B 41 REMARK 465 PRO B 42 REMARK 465 SER B 43 REMARK 465 VAL B 44 REMARK 465 SER B 45 REMARK 465 PRO B 46 REMARK 465 SER B 47 REMARK 465 ALA B 48 REMARK 465 GLN B 49 REMARK 465 PRO B 50 REMARK 465 TRP B 51 REMARK 465 THR B 52 REMARK 465 HIS B 53 REMARK 465 PRO B 54 REMARK 465 GLY B 55 REMARK 465 GLN B 56 REMARK 465 GLN B 744 REMARK 465 ALA B 745 REMARK 465 ALA B 746 REMARK 465 ALA B 747 REMARK 465 CYS B 748 REMARK 465 ASN B 763 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 202 CG CD CE NZ REMARK 470 HIS B 203 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 204 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 734 SG CYS B 741 1.60 REMARK 500 O PRO B 552 N TRP B 553 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 137 CG ASN A 137 ND2 0.195 REMARK 500 ASN A 232 CG ASN A 232 ND2 0.173 REMARK 500 ASN A 470 C TPQ A 471 N -0.298 REMARK 500 ASN A 666 CG ASN A 666 ND2 0.156 REMARK 500 CYS B 95 CB CYS B 95 SG -0.128 REMARK 500 ASN B 137 CG ASN B 137 ND2 0.184 REMARK 500 ASN B 232 CG ASN B 232 ND2 0.177 REMARK 500 PRO B 552 C TRP B 553 N -0.455 REMARK 500 TRP B 553 C SER B 554 N -0.257 REMARK 500 CYS B 741 CA CYS B 741 CB -0.228 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 56 N - CA - C ANGL. DEV. = 21.0 DEGREES REMARK 500 SER A 57 N - CA - CB ANGL. DEV. = -21.5 DEGREES REMARK 500 ARG A 329 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 329 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 PRO A 377 C - N - CA ANGL. DEV. = -9.2 DEGREES REMARK 500 LEU A 587 CA - CB - CG ANGL. DEV. = -16.8 DEGREES REMARK 500 ARG A 706 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 PRO B 134 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 LEU B 229 CA - CB - CG ANGL. DEV. = -21.5 DEGREES REMARK 500 LEU B 468 CA - CB - CG ANGL. DEV. = -14.9 DEGREES REMARK 500 PRO B 552 O - C - N ANGL. DEV. = -9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 56 41.70 -98.65 REMARK 500 GLN A 133 159.75 177.81 REMARK 500 SER A 150 -8.76 -144.41 REMARK 500 GLU A 187 -61.76 -133.97 REMARK 500 GLN A 190 -1.24 -53.20 REMARK 500 ALA A 191 25.71 -141.11 REMARK 500 CYS A 199 37.31 -143.82 REMARK 500 ALA A 214 -115.25 -73.05 REMARK 500 LEU A 218 -11.16 -140.45 REMARK 500 GLN A 267 56.44 32.10 REMARK 500 ALA A 283 13.28 -63.25 REMARK 500 TYR A 448 -47.29 70.51 REMARK 500 LEU A 469 -96.72 59.49 REMARK 500 VAL A 511 -19.22 -140.45 REMARK 500 ASP A 531 74.72 -113.30 REMARK 500 SER A 554 79.26 -161.47 REMARK 500 PHE A 625 48.20 -143.13 REMARK 500 ASP A 652 73.36 -157.55 REMARK 500 ASN A 665 53.53 -151.81 REMARK 500 GLN A 744 77.21 111.06 REMARK 500 ALA A 745 45.28 109.20 REMARK 500 ALA A 746 4.92 170.42 REMARK 500 ALA A 747 30.19 -82.40 REMARK 500 GLN B 58 -92.28 158.67 REMARK 500 PRO B 81 125.67 -26.21 REMARK 500 CYS B 95 121.02 -171.70 REMARK 500 GLN B 133 151.71 179.43 REMARK 500 MET B 152 104.30 -163.68 REMARK 500 CYS B 199 28.15 -140.55 REMARK 500 HIS B 203 -123.40 37.14 REMARK 500 THR B 213 -152.46 -118.12 REMARK 500 ALA B 214 -112.88 -78.58 REMARK 500 ARG B 216 73.41 -114.79 REMARK 500 PRO B 256 -9.89 -59.20 REMARK 500 ALA B 283 2.47 -67.53 REMARK 500 TYR B 448 -49.54 70.46 REMARK 500 LEU B 469 -104.75 55.74 REMARK 500 THR B 492 -147.32 -120.23 REMARK 500 SER B 512 -175.40 -172.64 REMARK 500 ASP B 543 -160.26 -163.91 REMARK 500 PRO B 552 -18.87 -44.73 REMARK 500 ALA B 611 129.15 -31.97 REMARK 500 PHE B 625 70.79 -166.74 REMARK 500 ASP B 652 72.35 -150.01 REMARK 500 ASN B 665 48.02 -153.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 213 ALA A 214 -143.62 REMARK 500 ASN B 94 CYS B 95 -143.67 REMARK 500 HIS B 203 ARG B 204 145.75 REMARK 500 GLY B 205 ARG B 206 -30.77 REMARK 500 THR B 213 ALA B 214 -131.59 REMARK 500 ALA B 749 PRO B 750 40.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO B 552 -18.16 REMARK 500 TRP B 553 15.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 801 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TPQ A 471 O4 REMARK 620 2 HIS A 520 NE2 88.0 REMARK 620 3 HIS A 522 NE2 100.2 85.0 REMARK 620 4 HIS A 684 ND1 103.5 94.5 156.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 529 OD1 REMARK 620 2 LEU A 530 O 103.5 REMARK 620 3 ASP A 531 OD1 93.0 87.7 REMARK 620 4 ASP A 673 OD1 97.9 158.4 87.7 REMARK 620 5 LEU A 674 O 84.2 99.6 172.5 85.8 REMARK 620 6 HOH A 929 O 163.6 81.3 102.9 79.1 79.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 803 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 572 OE1 REMARK 620 2 GLU A 572 OE2 51.6 REMARK 620 3 PHE A 663 O 82.0 88.2 REMARK 620 4 ASN A 665 OD1 70.0 120.5 94.9 REMARK 620 5 GLU A 667 OE1 100.6 96.2 175.6 82.7 REMARK 620 6 HOH A 903 O 130.4 80.3 85.5 159.2 95.3 REMARK 620 7 HOH A 941 O 149.6 155.3 85.1 83.9 90.9 75.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 801 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TPQ B 471 O4 REMARK 620 2 HIS B 520 NE2 74.6 REMARK 620 3 HIS B 522 NE2 94.5 91.3 REMARK 620 4 HIS B 684 ND1 110.7 94.3 154.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 529 OD1 REMARK 620 2 LEU B 530 O 108.3 REMARK 620 3 ASP B 531 OD1 98.0 81.9 REMARK 620 4 ASP B 673 OD1 101.2 150.3 92.0 REMARK 620 5 LEU B 674 O 89.6 92.6 171.7 89.9 REMARK 620 6 HOH B 925 O 170.9 73.3 91.1 77.9 81.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 803 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 572 OE1 REMARK 620 2 GLU B 572 OE2 48.3 REMARK 620 3 PHE B 663 O 70.0 88.6 REMARK 620 4 ASN B 665 OD1 68.5 113.9 86.3 REMARK 620 5 GLU B 667 OE1 101.9 86.7 171.8 89.5 REMARK 620 6 HOH B 903 O 128.0 85.9 88.8 159.4 97.6 REMARK 620 7 HOH B 910 O 139.8 160.5 81.6 82.3 104.9 77.2 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1US1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN VASCULAR ADHESION PROTEIN-1 REMARK 900 RELATED ID: 2C11 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 2-HYDRAZINOPYRIDINE OF SEMICARBAZIDE- REMARK 900 SENSITIVE AMINE OXIDASE REMARK 900 RELATED ID: 2C10 RELATED DB: PDB REMARK 900 THE STRUCTURE OF A TRUNCATED, SOLUBLE VERSION OF SEMICARBAZIDE- REMARK 900 SENSITIVE AMINE OXIDASE REMARK 900 RELATED ID: 1PU4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN VASCULAR ADHESION PROTEIN-1 REMARK 900 RELATED ID: 2Y74 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF HUMAN SOLUBLE PRIMARY AMINE OXIDASE AOC3 REMARK 900 IN THE OFF-COPPER CONFORMATION DBREF 2Y73 A 1 763 UNP Q16853 AOC3_HUMAN 1 763 DBREF 2Y73 B 1 763 UNP Q16853 AOC3_HUMAN 1 763 SEQRES 1 A 763 MET ASN GLN LYS THR ILE LEU VAL LEU LEU ILE LEU ALA SEQRES 2 A 763 VAL ILE THR ILE PHE ALA LEU VAL CYS VAL LEU LEU VAL SEQRES 3 A 763 GLY ARG GLY GLY ASP GLY GLY GLU PRO SER GLN LEU PRO SEQRES 4 A 763 HIS CYS PRO SER VAL SER PRO SER ALA GLN PRO TRP THR SEQRES 5 A 763 HIS PRO GLY GLN SER GLN LEU PHE ALA ASP LEU SER ARG SEQRES 6 A 763 GLU GLU LEU THR ALA VAL MET ARG PHE LEU THR GLN ARG SEQRES 7 A 763 LEU GLY PRO GLY LEU VAL ASP ALA ALA GLN ALA ARG PRO SEQRES 8 A 763 SER ASP ASN CYS VAL PHE SER VAL GLU LEU GLN LEU PRO SEQRES 9 A 763 PRO LYS ALA ALA ALA LEU ALA HIS LEU ASP ARG GLY SER SEQRES 10 A 763 PRO PRO PRO ALA ARG GLU ALA LEU ALA ILE VAL PHE PHE SEQRES 11 A 763 GLY ARG GLN PRO GLN PRO ASN VAL SER GLU LEU VAL VAL SEQRES 12 A 763 GLY PRO LEU PRO HIS PRO SER TYR MET ARG ASP VAL THR SEQRES 13 A 763 VAL GLU ARG HIS GLY GLY PRO LEU PRO TYR HIS ARG ARG SEQRES 14 A 763 PRO VAL LEU PHE GLN GLU TYR LEU ASP ILE ASP GLN MET SEQRES 15 A 763 ILE PHE ASN ARG GLU LEU PRO GLN ALA SER GLY LEU LEU SEQRES 16 A 763 HIS HIS CYS CYS PHE TYR LYS HIS ARG GLY ARG ASN LEU SEQRES 17 A 763 VAL THR MET THR THR ALA PRO ARG GLY LEU GLN SER GLY SEQRES 18 A 763 ASP ARG ALA THR TRP PHE GLY LEU TYR TYR ASN ILE SER SEQRES 19 A 763 GLY ALA GLY PHE PHE LEU HIS HIS VAL GLY LEU GLU LEU SEQRES 20 A 763 LEU VAL ASN HIS LYS ALA LEU ASP PRO ALA ARG TRP THR SEQRES 21 A 763 ILE GLN LYS VAL PHE TYR GLN GLY ARG TYR TYR ASP SER SEQRES 22 A 763 LEU ALA GLN LEU GLU ALA GLN PHE GLU ALA GLY LEU VAL SEQRES 23 A 763 ASN VAL VAL LEU ILE PRO ASP ASN GLY THR GLY GLY SER SEQRES 24 A 763 TRP SER LEU LYS SER PRO VAL PRO PRO GLY PRO ALA PRO SEQRES 25 A 763 PRO LEU GLN PHE TYR PRO GLN GLY PRO ARG PHE SER VAL SEQRES 26 A 763 GLN GLY SER ARG VAL ALA SER SER LEU TRP THR PHE SER SEQRES 27 A 763 PHE GLY LEU GLY ALA PHE SER GLY PRO ARG ILE PHE ASP SEQRES 28 A 763 VAL ARG PHE GLN GLY GLU ARG LEU VAL TYR GLU ILE SER SEQRES 29 A 763 LEU GLN GLU ALA LEU ALA ILE TYR GLY GLY ASN SER PRO SEQRES 30 A 763 ALA ALA MET THR THR ARG TYR VAL ASP GLY GLY PHE GLY SEQRES 31 A 763 MET GLY LYS TYR THR THR PRO LEU THR ARG GLY VAL ASP SEQRES 32 A 763 CYS PRO TYR LEU ALA THR TYR VAL ASP TRP HIS PHE LEU SEQRES 33 A 763 LEU GLU SER GLN ALA PRO LYS THR ILE ARG ASP ALA PHE SEQRES 34 A 763 CYS VAL PHE GLU GLN ASN GLN GLY LEU PRO LEU ARG ARG SEQRES 35 A 763 HIS HIS SER ASP LEU TYR SER HIS TYR PHE GLY GLY LEU SEQRES 36 A 763 ALA GLU THR VAL LEU VAL VAL ARG SER MET SER THR LEU SEQRES 37 A 763 LEU ASN TPQ ASP TYR VAL TRP ASP THR VAL PHE HIS PRO SEQRES 38 A 763 SER GLY ALA ILE GLU ILE ARG PHE TYR ALA THR GLY TYR SEQRES 39 A 763 ILE SER SER ALA PHE LEU PHE GLY ALA THR GLY LYS TYR SEQRES 40 A 763 GLY ASN GLN VAL SER GLU HIS THR LEU GLY THR VAL HIS SEQRES 41 A 763 THR HIS SER ALA HIS PHE LYS VAL ASP LEU ASP VAL ALA SEQRES 42 A 763 GLY LEU GLU ASN TRP VAL TRP ALA GLU ASP MET VAL PHE SEQRES 43 A 763 VAL PRO MET ALA VAL PRO TRP SER PRO GLU HIS GLN LEU SEQRES 44 A 763 GLN ARG LEU GLN VAL THR ARG LYS LEU LEU GLU MET GLU SEQRES 45 A 763 GLU GLN ALA ALA PHE LEU VAL GLY SER ALA THR PRO ARG SEQRES 46 A 763 TYR LEU TYR LEU ALA SER ASN HIS SER ASN LYS TRP GLY SEQRES 47 A 763 HIS PRO ARG GLY TYR ARG ILE GLN MET LEU SER PHE ALA SEQRES 48 A 763 GLY GLU PRO LEU PRO GLN ASN SER SER MET ALA ARG GLY SEQRES 49 A 763 PHE SER TRP GLU ARG TYR GLN LEU ALA VAL THR GLN ARG SEQRES 50 A 763 LYS GLU GLU GLU PRO SER SER SER SER VAL PHE ASN GLN SEQRES 51 A 763 ASN ASP PRO TRP ALA PRO THR VAL ASP PHE SER ASP PHE SEQRES 52 A 763 ILE ASN ASN GLU THR ILE ALA GLY LYS ASP LEU VAL ALA SEQRES 53 A 763 TRP VAL THR ALA GLY PHE LEU HIS ILE PRO HIS ALA GLU SEQRES 54 A 763 ASP ILE PRO ASN THR VAL THR VAL GLY ASN GLY VAL GLY SEQRES 55 A 763 PHE PHE LEU ARG PRO TYR ASN PHE PHE ASP GLU ASP PRO SEQRES 56 A 763 SER PHE TYR SER ALA ASP SER ILE TYR PHE ARG GLY ASP SEQRES 57 A 763 GLN ASP ALA GLY ALA CYS GLU VAL ASN PRO LEU ALA CYS SEQRES 58 A 763 LEU PRO GLN ALA ALA ALA CYS ALA PRO ASP LEU PRO ALA SEQRES 59 A 763 PHE SER HIS GLY GLY PHE SER HIS ASN SEQRES 1 B 763 MET ASN GLN LYS THR ILE LEU VAL LEU LEU ILE LEU ALA SEQRES 2 B 763 VAL ILE THR ILE PHE ALA LEU VAL CYS VAL LEU LEU VAL SEQRES 3 B 763 GLY ARG GLY GLY ASP GLY GLY GLU PRO SER GLN LEU PRO SEQRES 4 B 763 HIS CYS PRO SER VAL SER PRO SER ALA GLN PRO TRP THR SEQRES 5 B 763 HIS PRO GLY GLN SER GLN LEU PHE ALA ASP LEU SER ARG SEQRES 6 B 763 GLU GLU LEU THR ALA VAL MET ARG PHE LEU THR GLN ARG SEQRES 7 B 763 LEU GLY PRO GLY LEU VAL ASP ALA ALA GLN ALA ARG PRO SEQRES 8 B 763 SER ASP ASN CYS VAL PHE SER VAL GLU LEU GLN LEU PRO SEQRES 9 B 763 PRO LYS ALA ALA ALA LEU ALA HIS LEU ASP ARG GLY SER SEQRES 10 B 763 PRO PRO PRO ALA ARG GLU ALA LEU ALA ILE VAL PHE PHE SEQRES 11 B 763 GLY ARG GLN PRO GLN PRO ASN VAL SER GLU LEU VAL VAL SEQRES 12 B 763 GLY PRO LEU PRO HIS PRO SER TYR MET ARG ASP VAL THR SEQRES 13 B 763 VAL GLU ARG HIS GLY GLY PRO LEU PRO TYR HIS ARG ARG SEQRES 14 B 763 PRO VAL LEU PHE GLN GLU TYR LEU ASP ILE ASP GLN MET SEQRES 15 B 763 ILE PHE ASN ARG GLU LEU PRO GLN ALA SER GLY LEU LEU SEQRES 16 B 763 HIS HIS CYS CYS PHE TYR LYS HIS ARG GLY ARG ASN LEU SEQRES 17 B 763 VAL THR MET THR THR ALA PRO ARG GLY LEU GLN SER GLY SEQRES 18 B 763 ASP ARG ALA THR TRP PHE GLY LEU TYR TYR ASN ILE SER SEQRES 19 B 763 GLY ALA GLY PHE PHE LEU HIS HIS VAL GLY LEU GLU LEU SEQRES 20 B 763 LEU VAL ASN HIS LYS ALA LEU ASP PRO ALA ARG TRP THR SEQRES 21 B 763 ILE GLN LYS VAL PHE TYR GLN GLY ARG TYR TYR ASP SER SEQRES 22 B 763 LEU ALA GLN LEU GLU ALA GLN PHE GLU ALA GLY LEU VAL SEQRES 23 B 763 ASN VAL VAL LEU ILE PRO ASP ASN GLY THR GLY GLY SER SEQRES 24 B 763 TRP SER LEU LYS SER PRO VAL PRO PRO GLY PRO ALA PRO SEQRES 25 B 763 PRO LEU GLN PHE TYR PRO GLN GLY PRO ARG PHE SER VAL SEQRES 26 B 763 GLN GLY SER ARG VAL ALA SER SER LEU TRP THR PHE SER SEQRES 27 B 763 PHE GLY LEU GLY ALA PHE SER GLY PRO ARG ILE PHE ASP SEQRES 28 B 763 VAL ARG PHE GLN GLY GLU ARG LEU VAL TYR GLU ILE SER SEQRES 29 B 763 LEU GLN GLU ALA LEU ALA ILE TYR GLY GLY ASN SER PRO SEQRES 30 B 763 ALA ALA MET THR THR ARG TYR VAL ASP GLY GLY PHE GLY SEQRES 31 B 763 MET GLY LYS TYR THR THR PRO LEU THR ARG GLY VAL ASP SEQRES 32 B 763 CYS PRO TYR LEU ALA THR TYR VAL ASP TRP HIS PHE LEU SEQRES 33 B 763 LEU GLU SER GLN ALA PRO LYS THR ILE ARG ASP ALA PHE SEQRES 34 B 763 CYS VAL PHE GLU GLN ASN GLN GLY LEU PRO LEU ARG ARG SEQRES 35 B 763 HIS HIS SER ASP LEU TYR SER HIS TYR PHE GLY GLY LEU SEQRES 36 B 763 ALA GLU THR VAL LEU VAL VAL ARG SER MET SER THR LEU SEQRES 37 B 763 LEU ASN TPQ ASP TYR VAL TRP ASP THR VAL PHE HIS PRO SEQRES 38 B 763 SER GLY ALA ILE GLU ILE ARG PHE TYR ALA THR GLY TYR SEQRES 39 B 763 ILE SER SER ALA PHE LEU PHE GLY ALA THR GLY LYS TYR SEQRES 40 B 763 GLY ASN GLN VAL SER GLU HIS THR LEU GLY THR VAL HIS SEQRES 41 B 763 THR HIS SER ALA HIS PHE LYS VAL ASP LEU ASP VAL ALA SEQRES 42 B 763 GLY LEU GLU ASN TRP VAL TRP ALA GLU ASP MET VAL PHE SEQRES 43 B 763 VAL PRO MET ALA VAL PRO TRP SER PRO GLU HIS GLN LEU SEQRES 44 B 763 GLN ARG LEU GLN VAL THR ARG LYS LEU LEU GLU MET GLU SEQRES 45 B 763 GLU GLN ALA ALA PHE LEU VAL GLY SER ALA THR PRO ARG SEQRES 46 B 763 TYR LEU TYR LEU ALA SER ASN HIS SER ASN LYS TRP GLY SEQRES 47 B 763 HIS PRO ARG GLY TYR ARG ILE GLN MET LEU SER PHE ALA SEQRES 48 B 763 GLY GLU PRO LEU PRO GLN ASN SER SER MET ALA ARG GLY SEQRES 49 B 763 PHE SER TRP GLU ARG TYR GLN LEU ALA VAL THR GLN ARG SEQRES 50 B 763 LYS GLU GLU GLU PRO SER SER SER SER VAL PHE ASN GLN SEQRES 51 B 763 ASN ASP PRO TRP ALA PRO THR VAL ASP PHE SER ASP PHE SEQRES 52 B 763 ILE ASN ASN GLU THR ILE ALA GLY LYS ASP LEU VAL ALA SEQRES 53 B 763 TRP VAL THR ALA GLY PHE LEU HIS ILE PRO HIS ALA GLU SEQRES 54 B 763 ASP ILE PRO ASN THR VAL THR VAL GLY ASN GLY VAL GLY SEQRES 55 B 763 PHE PHE LEU ARG PRO TYR ASN PHE PHE ASP GLU ASP PRO SEQRES 56 B 763 SER PHE TYR SER ALA ASP SER ILE TYR PHE ARG GLY ASP SEQRES 57 B 763 GLN ASP ALA GLY ALA CYS GLU VAL ASN PRO LEU ALA CYS SEQRES 58 B 763 LEU PRO GLN ALA ALA ALA CYS ALA PRO ASP LEU PRO ALA SEQRES 59 B 763 PHE SER HIS GLY GLY PHE SER HIS ASN MODRES 2Y73 ASN A 137 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN A 232 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN A 592 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN A 666 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN B 137 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN B 232 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN B 592 ASN GLYCOSYLATION SITE MODRES 2Y73 ASN B 666 ASN GLYCOSYLATION SITE MODRES 2Y73 TPQ A 471 TYR MODRES 2Y73 TPQ B 471 TYR HET TPQ A 471 14 HET TPQ B 471 14 HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET MAN E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET CU A 801 1 HET CA A 802 1 HET CA A 803 1 HET IMD A 804 5 HET IMD A 805 5 HET IMD A 806 5 HET NAG A 812 14 HET NAG A 813 14 HET IMD A 814 5 HET FMT A 815 3 HET FMT A 816 3 HET CU B 801 1 HET CA B 802 1 HET CA B 803 1 HET IMD B 804 5 HET IMD B 805 5 HET IMD B 806 5 HET NAG B 812 14 HET NAG B 813 14 HET IMD B 814 5 HETNAM TPQ 5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CU COPPER (II) ION HETNAM CA CALCIUM ION HETNAM IMD IMIDAZOLE HETNAM FMT FORMIC ACID HETSYN TPQ 5-(2-CARBOXY-2-AMINOETHYL)-4-HYDROXY-1,2-BENZOQUINONE; HETSYN 2 TPQ 2,4,5-TRIHYDROXYPHENYLALANINE QUINONE; TOPA QUINONE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 1 TPQ 2(C9 H9 N O5) FORMUL 3 NAG 12(C8 H15 N O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 7 CU 2(CU 2+) FORMUL 8 CA 4(CA 2+) FORMUL 10 IMD 8(C3 H5 N2 1+) FORMUL 16 FMT 2(C H2 O2) FORMUL 27 HOH *346(H2 O) HELIX 1 AA1 SER A 64 GLY A 80 1 17 HELIX 2 AA2 ASP A 85 ALA A 89 5 5 HELIX 3 AA3 PRO A 105 GLY A 116 1 12 HELIX 4 AA4 VAL A 155 GLY A 161 1 7 HELIX 5 AA5 HIS A 167 ARG A 169 5 3 HELIX 6 AA6 LEU A 172 GLU A 187 1 16 HELIX 7 AA7 LEU A 188 GLN A 190 5 3 HELIX 8 AA8 ALA A 191 CYS A 199 1 9 HELIX 9 AA9 GLY A 237 LEU A 240 5 4 HELIX 10 AB1 ASP A 255 TRP A 259 5 5 HELIX 11 AB2 SER A 273 ALA A 283 1 11 HELIX 12 AB3 SER A 376 THR A 382 1 7 HELIX 13 AB4 GLY A 387 PHE A 389 5 3 HELIX 14 AB5 ALA A 503 LYS A 506 5 4 HELIX 15 AB6 MET A 571 ALA A 576 5 6 HELIX 16 AB7 MET A 621 GLU A 628 5 8 HELIX 17 AB8 ASP A 659 ILE A 664 5 6 HELIX 18 AB9 HIS A 687 ILE A 691 5 5 HELIX 19 AC1 ASP A 714 SER A 719 5 6 HELIX 20 AC2 ASN A 737 LEU A 742 1 6 HELIX 21 AC3 SER B 64 LEU B 79 1 16 HELIX 22 AC4 PRO B 105 ARG B 115 1 11 HELIX 23 AC5 VAL B 155 GLY B 161 1 7 HELIX 24 AC6 HIS B 167 ARG B 169 5 3 HELIX 25 AC7 LEU B 172 GLU B 187 1 16 HELIX 26 AC8 LEU B 188 SER B 192 5 5 HELIX 27 AC9 GLY B 193 PHE B 200 1 8 HELIX 28 AD1 GLY B 237 LEU B 240 5 4 HELIX 29 AD2 ASP B 255 TRP B 259 5 5 HELIX 30 AD3 SER B 273 ALA B 283 1 11 HELIX 31 AD4 SER B 376 THR B 381 1 6 HELIX 32 AD5 GLY B 387 PHE B 389 5 3 HELIX 33 AD6 THR B 504 LYS B 506 5 3 HELIX 34 AD7 MET B 571 ALA B 576 5 6 HELIX 35 AD8 MET B 621 GLU B 628 5 8 HELIX 36 AD9 ASP B 659 ILE B 664 5 6 HELIX 37 AE1 HIS B 687 ILE B 691 5 5 HELIX 38 AE2 ASP B 714 SER B 719 5 6 HELIX 39 AE3 ASN B 737 CYS B 741 5 5 SSBOND 1 CYS A 198 CYS A 199 1555 1555 2.07 SSBOND 2 CYS A 404 CYS A 430 1555 1555 2.03 SSBOND 3 CYS A 734 CYS A 741 1555 1555 2.03 SSBOND 4 CYS B 198 CYS B 199 1555 1555 2.06 SSBOND 5 CYS B 404 CYS B 430 1555 1555 2.04 LINK ND2 ASN A 137 C1 NAG C 1 1555 1555 1.42 LINK ND2 ASN A 232 C1 NAG D 1 1555 1555 1.41 LINK C TPQ A 471 N ASP A 472 1555 1555 1.31 LINK ND2 ASN A 592 C1 NAG A 812 1555 1555 1.28 LINK ND2 ASN A 666 C1 NAG A 813 1555 1555 1.45 LINK ND2 ASN B 137 C1 NAG E 1 1555 1555 1.42 LINK ND2 ASN B 232 C1 NAG F 1 1555 1555 1.42 LINK C ASN B 470 N TPQ B 471 1555 1555 1.33 LINK C TPQ B 471 N ASP B 472 1555 1555 1.32 LINK ND2 ASN B 592 C1 NAG B 812 1555 1555 1.44 LINK ND2 ASN B 666 C1 NAG B 813 1555 1555 1.28 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.40 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.42 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.41 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.39 LINK O4 NAG E 2 C1 MAN E 3 1555 1555 1.42 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.42 LINK O4 TPQ A 471 CU CU A 801 1555 1555 2.23 LINK NE2 HIS A 520 CU CU A 801 1555 1555 2.04 LINK NE2 HIS A 522 CU CU A 801 1555 1555 2.34 LINK OD1 ASP A 529 CA CA A 802 1555 1555 2.31 LINK O LEU A 530 CA CA A 802 1555 1555 2.34 LINK OD1 ASP A 531 CA CA A 802 1555 1555 2.37 LINK OE1 GLU A 572 CA CA A 803 1555 1555 2.48 LINK OE2 GLU A 572 CA CA A 803 1555 1555 2.61 LINK O PHE A 663 CA CA A 803 1555 1555 2.34 LINK OD1 ASN A 665 CA CA A 803 1555 1555 2.54 LINK OE1 GLU A 667 CA CA A 803 1555 1555 2.21 LINK OD1 ASP A 673 CA CA A 802 1555 1555 2.39 LINK O LEU A 674 CA CA A 802 1555 1555 2.44 LINK ND1 HIS A 684 CU CU A 801 1555 1555 2.11 LINK CA CA A 802 O HOH A 929 1555 1555 2.52 LINK CA CA A 803 O HOH A 903 1555 1555 2.61 LINK CA CA A 803 O HOH A 941 1555 1555 2.32 LINK O4 TPQ B 471 CU CU B 801 1555 1555 2.39 LINK NE2 HIS B 520 CU CU B 801 1555 1555 2.14 LINK NE2 HIS B 522 CU CU B 801 1555 1555 2.14 LINK OD1 ASP B 529 CA CA B 802 1555 1555 2.33 LINK O LEU B 530 CA CA B 802 1555 1555 2.42 LINK OD1 ASP B 531 CA CA B 802 1555 1555 2.28 LINK OE1 GLU B 572 CA CA B 803 1555 1555 2.48 LINK OE2 GLU B 572 CA CA B 803 1555 1555 2.80 LINK O PHE B 663 CA CA B 803 1555 1555 2.53 LINK OD1 ASN B 665 CA CA B 803 1555 1555 2.56 LINK OE1 GLU B 667 CA CA B 803 1555 1555 2.75 LINK OD1 ASP B 673 CA CA B 802 1555 1555 2.45 LINK O LEU B 674 CA CA B 802 1555 1555 2.46 LINK ND1 HIS B 684 CU CU B 801 1555 1555 2.09 LINK CA CA B 802 O HOH B 925 1555 1555 2.59 LINK CA CA B 803 O HOH B 903 1555 1555 2.38 LINK CA CA B 803 O HOH B 910 1555 1555 2.41 CISPEP 1 GLY A 144 PRO A 145 0 -3.93 CISPEP 2 LEU A 146 PRO A 147 0 10.24 CISPEP 3 ILE A 691 PRO A 692 0 0.97 CISPEP 4 GLY B 144 PRO B 145 0 -7.51 CISPEP 5 LEU B 146 PRO B 147 0 15.02 CISPEP 6 ILE B 691 PRO B 692 0 7.65 CISPEP 7 LEU B 742 PRO B 743 0 13.34 CRYST1 225.755 225.755 216.985 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004430 0.002557 0.000000 0.00000 SCALE2 0.000000 0.005115 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004609 0.00000