PDB Short entry for 2Y7L HEADER CELL ADHESION 31-JAN-11 2Y7L TITLE STRUCTURE OF N-TERMINAL DOMAIN OF CANDIDA ALBICANS ALS9-2 IN COMPLEX TITLE 2 WITH HUMAN FIBRINOGEN GAMMA PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AGGLUTININ-LIKE ALS9 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 18-328; COMPND 5 SYNONYM: NT_ALS9-2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: FIBRINOGEN GAMMA CHAIN, ISOFORM CRA_A; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: RESIDUES 318-334; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_TAXID: 5476; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ORIGAMI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32 XA/LIC; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS CELL ADHESION, ADHESIN, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.S.SALGADO,E.COTA REVDAT 2 20-DEC-23 2Y7L 1 REMARK REVDAT 1 05-OCT-11 2Y7L 0 JRNL AUTH P.S.SALGADO,R.YAN,J.D.TAYLOR,L.BURCHELL,R.JONES,L.L.HOYER, JRNL AUTH 2 S.J.MATTHEWS,P.J.SIMPSON,E.COTA JRNL TITL STRUCTURAL BASIS FOR THE BROAD SPECIFICITY TO HOST- CELL JRNL TITL 2 LIGANDS BY THE PATHOGENIC FUNGUS CANDIDA ALBICANS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 15775 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21896717 JRNL DOI 10.1073/PNAS.1103496108 REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 47530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2540 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.52 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3014 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 153 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2412 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 313 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.222 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2489 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3415 ; 2.096 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 325 ; 6.599 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;35.886 ;25.152 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 367 ;10.693 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ; 6.021 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 404 ; 0.140 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1886 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2Y7L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1290047208. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50160 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 9.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 36.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.6 REMARK 200 DATA REDUNDANCY IN SHELL : 9.30 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 9.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Y7M REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2MM AMMONIUM FLUORIDE, 20% PEG3350, REMARK 280 PH 6.2, PH 8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.79050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.11150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.63650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.11150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.79050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.63650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 2 REMARK 465 GLU B 3 REMARK 465 GLY B 4 REMARK 465 GLN B 5 REMARK 465 GLN B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 LEU B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2041 O HOH A 2087 1.98 REMARK 500 O HOH A 2206 O HOH A 2269 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2109 O HOH A 2110 3554 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 188 CB CYS A 188 SG -0.140 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 268 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 305 CB - CG - OD2 ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 21 -43.43 82.96 REMARK 500 GLU A 85 -131.53 46.67 REMARK 500 GLN A 248 -137.82 -102.30 REMARK 500 ASN A 276 72.31 55.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Y7N RELATED DB: PDB REMARK 900 STRUCTURE OF N-TERMINAL DOMAIN OF CANDIDA ALBICANS ALS9-2 - APO FORM REMARK 900 RELATED ID: 2Y7M RELATED DB: PDB REMARK 900 STRUCTURE OF N-TERMINAL DOMAIN OF CANDIDA ALBICANS ALS9-2 (PT REMARK 900 DERIVATIVE) REMARK 900 RELATED ID: 2Y7O RELATED DB: PDB REMARK 900 STRUCTURE OF N-TERMINAL DOMAIN OF CANDIDA ALBICANS ALS9-2 - G299W REMARK 900 MUTANT REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE EXCLUDES N-TERMINAL SIGNAL SEQUENCE (18 RESIDUES) REMARK 999 FULL 17MER PEPTIDE SEQUENCE GEGQQHHLGGAKQAGDV ONLY LAST 6 REMARK 999 RESIDUES PRESENT IN PDB DBREF 2Y7L A 1 311 UNP Q5A8T1 Q5A8T1_CANAL 18 328 DBREF 2Y7L B 2 18 UNP D3DP16 D3DP16_HUMAN 318 334 SEQADV 2Y7L ARG A 0 UNP Q5A8T1 EXPRESSION TAG SEQADV 2Y7L THR A 51 UNP Q5A8T1 ASN 68 CONFLICT SEQADV 2Y7L VAL A 212 UNP Q5A8T1 ILE 229 CONFLICT SEQRES 1 A 312 ARG LYS THR ILE THR GLY VAL PHE ASN SER PHE ASP SER SEQRES 2 A 312 LEU THR TRP THR ARG SER VAL GLU TYR VAL TYR LYS GLY SEQRES 3 A 312 PRO GLU THR PRO THR TRP ASN ALA VAL LEU GLY TRP SER SEQRES 4 A 312 LEU ASN SER THR THR ALA ASP PRO GLY ASP THR PHE THR SEQRES 5 A 312 LEU ILE LEU PRO CYS VAL PHE LYS PHE ILE THR THR GLN SEQRES 6 A 312 THR SER VAL ASP LEU THR ALA ASP GLY VAL SER TYR ALA SEQRES 7 A 312 THR CYS ASP PHE ASN ALA GLY GLU GLU PHE THR THR PHE SEQRES 8 A 312 SER SER LEU SER CYS THR VAL ASN SER VAL SER VAL SER SEQRES 9 A 312 TYR ALA ARG VAL SER GLY THR VAL LYS LEU PRO ILE THR SEQRES 10 A 312 PHE ASN VAL GLY GLY THR GLY SER SER VAL ASP LEU ALA SEQRES 11 A 312 ASP SER LYS CYS PHE THR ALA GLY LYS ASN THR VAL THR SEQRES 12 A 312 PHE MET ASP GLY ASP THR LYS ILE SER THR THR VAL ASP SEQRES 13 A 312 PHE ASP ALA SER PRO VAL SER PRO SER GLY TYR ILE THR SEQRES 14 A 312 SER SER ARG ILE ILE PRO SER LEU ASN LYS LEU SER SER SEQRES 15 A 312 LEU PHE VAL VAL PRO GLN CYS GLU ASN GLY TYR THR SER SEQRES 16 A 312 GLY ILE MET GLY PHE VAL ALA SER ASN GLY ALA THR ILE SEQRES 17 A 312 ASP CYS SER ASN VAL ASN ILE GLY ILE SER LYS GLY LEU SEQRES 18 A 312 ASN ASP TRP ASN PHE PRO VAL SER SER GLU SER PHE SER SEQRES 19 A 312 TYR THR LYS THR CYS THR SER THR SER ILE THR VAL GLU SEQRES 20 A 312 PHE GLN ASN VAL PRO ALA GLY TYR ARG PRO PHE VAL ASP SEQRES 21 A 312 ALA TYR ILE SER ALA GLU ASN ILE ASP LYS TYR THR LEU SEQRES 22 A 312 THR TYR ALA ASN GLU TYR THR CYS GLU ASN GLY ASN THR SEQRES 23 A 312 VAL VAL ASP PRO PHE THR LEU THR TRP TRP GLY TYR LYS SEQRES 24 A 312 ASN SER GLU ALA ASP SER ASP GLY ASP VAL ILE VAL VAL SEQRES 1 B 17 GLY GLU GLY GLN GLN HIS HIS LEU GLY GLY ALA LYS GLN SEQRES 2 B 17 ALA GLY ASP VAL FORMUL 3 HOH *313(H2 O) HELIX 1 1 SER A 124 SER A 131 1 8 HELIX 2 2 PRO A 174 ASN A 177 5 4 SHEET 1 AA 4 PHE A 7 TRP A 15 0 SHEET 2 AA 4 TRP A 31 ASN A 40 -1 O ASN A 32 N THR A 14 SHEET 3 AA 4 ARG A 106 PHE A 117 -1 O VAL A 107 N LEU A 39 SHEET 4 AA 4 ASP A 303 ILE A 309 1 O ASP A 303 N LYS A 112 SHEET 1 AB 4 PHE A 7 TRP A 15 0 SHEET 2 AB 4 TRP A 31 ASN A 40 -1 O ASN A 32 N THR A 14 SHEET 3 AB 4 ARG A 106 PHE A 117 -1 O VAL A 107 N LEU A 39 SHEET 4 AB 4 VAL A 57 PHE A 60 -1 N PHE A 58 O THR A 116 SHEET 1 AC 2 ASP A 303 ILE A 309 0 SHEET 2 AC 2 ARG A 106 PHE A 117 1 O ARG A 106 N ILE A 309 SHEET 1 AD 4 THR A 49 PRO A 55 0 SHEET 2 AD 4 PHE A 90 VAL A 97 -1 O SER A 91 N LEU A 54 SHEET 3 AD 4 VAL A 74 ASN A 82 -1 O THR A 78 N THR A 96 SHEET 4 AD 4 SER A 66 ALA A 71 -1 O VAL A 67 N CYS A 79 SHEET 1 AE 2 GLY A 137 ASP A 145 0 SHEET 2 AE 2 THR A 148 PHE A 156 -1 O THR A 148 N ASP A 145 SHEET 1 AF 4 ILE A 167 ILE A 173 0 SHEET 2 AF 4 LYS A 178 VAL A 184 -1 O LYS A 178 N ILE A 173 SHEET 3 AF 4 TYR A 254 ALA A 264 -1 O VAL A 258 N PHE A 183 SHEET 4 AF 4 ALA A 205 LYS A 218 -1 O THR A 206 N SER A 263 SHEET 1 AG 6 TYR A 234 CYS A 238 0 SHEET 2 AG 6 SER A 242 PHE A 247 -1 O THR A 244 N THR A 237 SHEET 3 AG 6 TYR A 192 ALA A 201 -1 O GLY A 195 N PHE A 247 SHEET 4 AG 6 LYS A 269 TYR A 274 -1 O THR A 273 N VAL A 200 SHEET 5 AG 6 PHE A 290 TRP A 295 -1 O PHE A 290 N TYR A 274 SHEET 6 AG 6 LYS B 13 GLY B 16 1 O LYS B 13 N THR A 293 SHEET 1 AH 5 TYR A 234 CYS A 238 0 SHEET 2 AH 5 SER A 242 PHE A 247 -1 O THR A 244 N THR A 237 SHEET 3 AH 5 TYR A 192 ALA A 201 -1 O GLY A 195 N PHE A 247 SHEET 4 AH 5 GLU A 277 CYS A 280 -1 O GLU A 277 N ILE A 196 SHEET 5 AH 5 THR A 285 VAL A 287 -1 O VAL A 286 N TYR A 278 SSBOND 1 CYS A 56 CYS A 133 1555 1555 2.11 SSBOND 2 CYS A 79 CYS A 95 1555 1555 2.13 SSBOND 3 CYS A 188 CYS A 280 1555 1555 2.04 SSBOND 4 CYS A 209 CYS A 238 1555 1555 2.09 CISPEP 1 PRO A 29 THR A 30 0 3.20 CRYST1 35.581 69.273 122.223 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028105 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008182 0.00000