PDB Short entry for 2YDS HEADER HYDROLASE/PEPTIDE 24-MAR-11 2YDS TITLE CPOGA D298N IN COMPLEX WITH TAB1-DERIVED O-GLCNAC PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: O-GLCNACASE NAGJ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 31-618; COMPND 5 SYNONYM: BETA-N-ACETYLHEXOSAMINIDASE, BETA-HEXOSAMINIDASE, GH84, O- COMPND 6 GLCNACASE, HEXOSAMINIDASE B, N-ACETYL-BETA-GLUCOSAMINIDASE; COMPND 7 EC: 3.2.1.169; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 OTHER_DETAILS: CPNAGJ; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: TGF-BETA-ACTIVATED KINASE 1 AND MAP3K7-BINDING PROTEIN 1; COMPND 13 CHAIN: T; COMPND 14 FRAGMENT: RESIDUES 392-398; COMPND 15 SYNONYM: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING COMPND 16 PROTEIN 1, TGF-BETA-ACTIVATED KINASE 1-BINDING PROTEIN 1, TAK1- COMPND 17 BINDING PROTEIN 1; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: O-GLCNAC GLYCOSYLATION ON S395 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 ATCC: 13124; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS HYDROLASE-PEPTIDE COMPLEX, METAL BINDING, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHIMPL,V.S.BORODKIN,L.J.GRAY,D.M.F.VAN AALTEN REVDAT 3 20-DEC-23 2YDS 1 HETSYN REVDAT 2 29-JUL-20 2YDS 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 14-MAR-12 2YDS 0 JRNL AUTH M.SCHIMPL,V.S.BORODKIN,L.J.GRAY,D.M.F.VAN AALTEN JRNL TITL SYNERGY OF PEPTIDE AND SUGAR IN O-GLCNACASE SUBSTRATE JRNL TITL 2 RECOGNITION. JRNL REF CHEM.BIOL. V. 19 173 2012 JRNL REFN ISSN 1074-5521 JRNL PMID 22365600 JRNL DOI 10.1016/J.CHEMBIOL.2012.01.011 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 36914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.100 REMARK 3 FREE R VALUE TEST SET COUNT : 777 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2715 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4614 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.14000 REMARK 3 B22 (A**2) : 2.14000 REMARK 3 B33 (A**2) : -3.21000 REMARK 3 B12 (A**2) : 1.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.267 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.221 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.344 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4725 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6417 ; 1.404 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 582 ; 6.160 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 244 ;39.291 ;25.943 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 792 ;15.105 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.732 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 699 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3662 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2909 ; 0.539 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4688 ; 1.207 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1816 ; 2.287 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1729 ; 4.084 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): 19 ;15.312 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2YDS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1290047793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37698 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2J62 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.42000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 98.84000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 74.13000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 123.55000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.71000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASP 298 TO ASN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 29 REMARK 465 SER A 30 REMARK 465 VAL A 31 REMARK 465 GLY A 32 REMARK 465 PRO A 33 REMARK 465 LYS A 34 REMARK 465 THR A 35 REMARK 465 GLY A 36 REMARK 465 GLU A 37 REMARK 465 GLU A 38 REMARK 465 SER A 618 REMARK 465 ALA T 397 REMARK 465 GLN T 398 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 150 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 131 -2.07 77.95 REMARK 500 SER A 166 -10.15 75.73 REMARK 500 ALA A 216 48.20 -153.54 REMARK 500 ARG A 224 -75.54 -138.85 REMARK 500 ASP A 262 26.26 -145.86 REMARK 500 PHE A 318 -64.22 -121.52 REMARK 500 PHE A 403 68.72 -165.99 REMARK 500 THR A 489 -98.71 -133.11 REMARK 500 ALA A 498 75.26 16.87 REMARK 500 VAL A 608 -84.84 -126.56 REMARK 500 TYR T 394 -175.88 -172.26 REMARK 500 SER T 395 73.18 -100.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 BETA-D-N-ACETYLGLUCOSAMINE (NAG): O-GLCNAC GLYCOSYLATION ON REMARK 600 S395 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1619 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 51 OE2 REMARK 620 2 ASN A 450 OD1 92.2 REMARK 620 3 ASP A 452 OD1 173.7 84.3 REMARK 620 4 HOH A2004 O 82.5 67.6 91.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1620 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 54 OE1 REMARK 620 2 GLU A 54 OE2 42.9 REMARK 620 3 ASP A 266 OD2 72.3 49.8 REMARK 620 4 LYS A 306 NZ 99.4 57.7 67.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1621 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 58 OD2 REMARK 620 2 ASP A 58 OD1 51.1 REMARK 620 3 GLU A 272 OE2 117.3 109.3 REMARK 620 4 GLU A 272 OE2 37.5 13.7 111.8 REMARK 620 5 GLU A 272 OE1 124.8 83.8 43.6 94.1 REMARK 620 6 HOH A2001 O 113.1 71.6 111.5 83.5 70.2 REMARK 620 7 HOH A2059 O 88.1 138.9 82.8 125.2 124.2 141.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1622 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 68 O REMARK 620 2 GLU A 71 OE1 84.4 REMARK 620 3 GLU A 71 OE2 116.4 51.5 REMARK 620 4 HOH A2009 O 107.8 80.3 106.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1623 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 73 O REMARK 620 2 GLU A 108 OE1 111.7 REMARK 620 3 ASP A 111 OD1 99.4 116.3 REMARK 620 4 ASP A 111 OD2 72.3 90.3 48.2 REMARK 620 5 HOH A2019 O 174.3 66.4 86.1 112.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1624 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 112 OD2 REMARK 620 2 GLU A 550 OE2 113.7 REMARK 620 3 HOH A2020 O 75.0 171.2 REMARK 620 4 HOH A2021 O 76.6 83.8 97.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1625 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 117 OD1 REMARK 620 2 ASP A 117 OD2 51.5 REMARK 620 3 GLU A 145 OE2 95.6 145.5 REMARK 620 4 GLU A 545 OE2 96.2 75.6 101.7 REMARK 620 5 GLU A 545 OE1 148.3 104.5 101.0 54.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1626 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 139 OD2 REMARK 620 2 ASP A 139 OD1 51.9 REMARK 620 3 ASP A 268 OD2 117.7 90.3 REMARK 620 4 HOH A2056 O 120.4 75.3 83.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1628 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 170 OE2 REMARK 620 2 GLU A 170 OE1 54.0 REMARK 620 3 HOH A2007 O 154.0 103.3 REMARK 620 4 HOH A2026 O 75.7 79.7 88.8 REMARK 620 5 HOH A2027 O 81.8 134.6 122.2 101.1 REMARK 620 6 HOH A2033 O 84.4 89.2 109.9 160.1 75.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1629 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 272 OE1 REMARK 620 2 HIS A 276 NE2 97.1 REMARK 620 3 HOH A2001 O 62.0 157.1 REMARK 620 4 HOH A2058 O 62.9 77.6 83.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1630 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 282 OE1 REMARK 620 2 ASP A 286 OD1 97.9 REMARK 620 3 ASP A 286 OD2 85.3 51.6 REMARK 620 4 GLU A 588 OE2 130.2 93.4 136.2 REMARK 620 5 GLU A 588 OE1 109.0 144.5 150.4 51.5 REMARK 620 6 HOH A2062 O 77.4 130.2 78.6 127.8 79.5 REMARK 620 7 HOH A2063 O 148.8 81.6 69.9 80.8 86.7 79.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1631 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 362 OE1 REMARK 620 2 GLU A 362 OE2 57.5 REMARK 620 3 ASP A 424 OD2 135.1 146.7 REMARK 620 4 ASP A 424 OD1 85.5 131.9 50.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1633 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 404 O REMARK 620 2 HIS A 433 NE2 154.9 REMARK 620 3 HOH A2083 O 85.1 86.8 REMARK 620 4 HOH A2091 O 101.3 102.0 87.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1636 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 457 OD2 REMARK 620 2 HOH A2099 O 81.8 REMARK 620 3 HOH A2100 O 89.6 162.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1635 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 474 OD2 REMARK 620 2 ASP A 474 OD1 50.0 REMARK 620 3 GLU A 534 OE2 118.5 129.5 REMARK 620 4 GLU A 534 OE1 112.2 88.0 47.4 REMARK 620 5 HOH A2042 O 81.1 114.1 110.4 157.3 REMARK 620 6 HOH A2106 O 70.9 71.8 158.5 150.8 49.7 REMARK 620 7 HOH A2115 O 137.0 94.7 102.7 86.0 96.5 75.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1637 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 545 OE2 REMARK 620 2 GLU A 549 OE2 103.5 REMARK 620 3 GLU A 549 OE1 58.7 48.6 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CBI RELATED DB: PDB REMARK 900 STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS NAGJ FAMILY 84 GLYCOSIDE REMARK 900 HYDROLASE, A HOMOLOGUE OF HUMAN O-GLCNACASE REMARK 900 RELATED ID: 2YIY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF COMPOUND 8 BOUND TO TAK1-TAB REMARK 900 RELATED ID: 2VUR RELATED DB: PDB REMARK 900 CHEMICAL DISSECTION OF THE LINK BETWEEN STREPTOZOTOCIN, O-GLCNAC REMARK 900 AND PANCREATIC CELL DEATH REMARK 900 RELATED ID: 2X0Y RELATED DB: PDB REMARK 900 SCREENING-BASED DISCOVERY OF DRUG-LIKE O-GLCNACASE INHIBITOR REMARK 900 SCAFFOLDS REMARK 900 RELATED ID: 2XPK RELATED DB: PDB REMARK 900 CELL-PENETRANT, NANOMOLAR O-GLCNACASE INHIBITORS SELECTIVE AGAINST REMARK 900 LYSOSOMAL HEXOSAMINIDASES REMARK 900 RELATED ID: 2J62 RELATED DB: PDB REMARK 900 STRUCTURE OF A BACTERIAL O-GLCNACASE IN COMPLEX WITH GLCNACSTATIN REMARK 900 RELATED ID: 2WB5 RELATED DB: PDB REMARK 900 GLCNACSTATINS ARE NANOMOLAR INHIBITORS OF HUMAN O- GLCNACASE REMARK 900 INDUCING CELLULAR HYPER-O-GLCNACYLATION REMARK 900 RELATED ID: 2JH2 RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF A COHESIN-LIKE MODULE FROM CLOSTRIDIUM REMARK 900 PERFRINGENS REMARK 900 RELATED ID: 2J4O RELATED DB: PDB REMARK 900 STRUCTURE OF TAB1 REMARK 900 RELATED ID: 2V5C RELATED DB: PDB REMARK 900 FAMILY 84 GLYCOSIDE HYDROLASE FROM CLOSTRIDIUM PERFRINGENS , 2.1 REMARK 900 ANGSTROM STRUCTURE REMARK 900 RELATED ID: 2CBJ RELATED DB: PDB REMARK 900 STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS NAGJ FAMILY 84 GLYCOSIDE REMARK 900 HYDROLASE, A HOMOLOGUE OF HUMAN O-GLCNACASE IN COMPLEX WITH PUGNAC REMARK 900 RELATED ID: 2YDQ RELATED DB: PDB REMARK 900 CPOGA D298N IN COMPLEX WITH HOGA-DERIVED O-GLCNAC PEPTIDE REMARK 900 RELATED ID: 2V5D RELATED DB: PDB REMARK 900 STRUCTURE OF A FAMILY 84 GLYCOSIDE HYDROLASE AND A FAMILY 32 REMARK 900 CARBOHYDRATE-BINDING MODULE IN TANDEM FROM CLOSTRIDIUM PERFRINGENS. REMARK 900 RELATED ID: 2YDR RELATED DB: PDB REMARK 900 CPOGA D298N IN COMPLEX WITH P53-DERIVED O-GLCNAC PEPTIDE DBREF 2YDS A 31 618 UNP Q0TR53 OGA_CLOP1 31 618 DBREF 2YDS T 392 398 UNP Q15750 TAB1_HUMAN 392 398 SEQADV 2YDS GLY A 29 UNP Q0TR53 EXPRESSION TAG SEQADV 2YDS SER A 30 UNP Q0TR53 EXPRESSION TAG SEQADV 2YDS ASN A 298 UNP Q0TR53 ASP 298 ENGINEERED MUTATION SEQADV 2YDS ASP A 388 UNP Q0TR53 ASN 388 CONFLICT SEQRES 1 A 590 GLY SER VAL GLY PRO LYS THR GLY GLU GLU ASN GLN VAL SEQRES 2 A 590 LEU VAL PRO ASN LEU ASN PRO THR PRO GLU ASN LEU GLU SEQRES 3 A 590 VAL VAL GLY ASP GLY PHE LYS ILE THR SER SER ILE ASN SEQRES 4 A 590 LEU VAL GLY GLU GLU GLU ALA ASP GLU ASN ALA VAL ASN SEQRES 5 A 590 ALA LEU ARG GLU PHE LEU THR ALA ASN ASN ILE GLU ILE SEQRES 6 A 590 ASN SER GLU ASN ASP PRO ASN SER THR THR LEU ILE ILE SEQRES 7 A 590 GLY GLU VAL ASP ASP ASP ILE PRO GLU LEU ASP GLU ALA SEQRES 8 A 590 LEU ASN GLY THR THR ALA GLU ASN LEU LYS GLU GLU GLY SEQRES 9 A 590 TYR ALA LEU VAL SER ASN ASP GLY LYS ILE ALA ILE GLU SEQRES 10 A 590 GLY LYS ASP GLY ASP GLY THR PHE TYR GLY VAL GLN THR SEQRES 11 A 590 PHE LYS GLN LEU VAL LYS GLU SER ASN ILE PRO GLU VAL SEQRES 12 A 590 ASN ILE THR ASP TYR PRO THR VAL SER ALA ARG GLY ILE SEQRES 13 A 590 VAL GLU GLY PHE TYR GLY THR PRO TRP THR HIS GLN ASP SEQRES 14 A 590 ARG LEU ASP GLN ILE LYS PHE TYR GLY GLU ASN LYS LEU SEQRES 15 A 590 ASN THR TYR ILE TYR ALA PRO LYS ASP ASP PRO TYR HIS SEQRES 16 A 590 ARG GLU LYS TRP ARG GLU PRO TYR PRO GLU SER GLU MET SEQRES 17 A 590 GLN ARG MET GLN GLU LEU ILE ASN ALA SER ALA GLU ASN SEQRES 18 A 590 LYS VAL ASP PHE VAL PHE GLY ILE SER PRO GLY ILE ASP SEQRES 19 A 590 ILE ARG PHE ASP GLY ASP ALA GLY GLU GLU ASP PHE ASN SEQRES 20 A 590 HIS LEU ILE THR LYS ALA GLU SER LEU TYR ASP MET GLY SEQRES 21 A 590 VAL ARG SER PHE ALA ILE TYR TRP ASP ASN ILE GLN ASP SEQRES 22 A 590 LYS SER ALA ALA LYS HIS ALA GLN VAL LEU ASN ARG PHE SEQRES 23 A 590 ASN GLU GLU PHE VAL LYS ALA LYS GLY ASP VAL LYS PRO SEQRES 24 A 590 LEU ILE THR VAL PRO THR GLU TYR ASP THR GLY ALA MET SEQRES 25 A 590 VAL SER ASN GLY GLN PRO ARG ALA TYR THR ARG ILE PHE SEQRES 26 A 590 ALA GLU THR VAL ASP PRO SER ILE GLU VAL MET TRP THR SEQRES 27 A 590 GLY PRO GLY VAL VAL THR ASN GLU ILE PRO LEU SER ASP SEQRES 28 A 590 ALA GLN LEU ILE SER GLY ILE TYR ASP ARG ASN MET ALA SEQRES 29 A 590 VAL TRP TRP ASN TYR PRO VAL THR ASP TYR PHE LYS GLY SEQRES 30 A 590 LYS LEU ALA LEU GLY PRO MET HIS GLY LEU ASP LYS GLY SEQRES 31 A 590 LEU ASN GLN TYR VAL ASP PHE PHE THR VAL ASN PRO MET SEQRES 32 A 590 GLU HIS ALA GLU LEU SER LYS ILE SER ILE HIS THR ALA SEQRES 33 A 590 ALA ASP TYR SER TRP ASN MET ASP ASN TYR ASP TYR ASP SEQRES 34 A 590 LYS ALA TRP ASN ARG ALA ILE ASP MET LEU TYR GLY ASP SEQRES 35 A 590 LEU ALA GLU ASP MET LYS VAL PHE ALA ASN HIS SER THR SEQRES 36 A 590 ARG MET ASP ASN LYS THR TRP ALA LYS SER GLY ARG GLU SEQRES 37 A 590 ASP ALA PRO GLU LEU ARG ALA LYS MET ASP GLU LEU TRP SEQRES 38 A 590 ASN LYS LEU SER SER LYS GLU ASP ALA SER ALA LEU ILE SEQRES 39 A 590 GLU GLU LEU TYR GLY GLU PHE ALA ARG MET GLU GLU ALA SEQRES 40 A 590 CYS ASN ASN LEU LYS ALA ASN LEU PRO GLU VAL ALA LEU SEQRES 41 A 590 GLU GLU CYS SER ARG GLN LEU ASP GLU LEU ILE THR LEU SEQRES 42 A 590 ALA GLN GLY ASP LYS ALA SER LEU ASP MET ILE VAL ALA SEQRES 43 A 590 GLN LEU ASN GLU ASP THR GLU ALA TYR GLU SER ALA LYS SEQRES 44 A 590 GLU ILE ALA GLN ASN LYS LEU ASN THR ALA LEU SER SER SEQRES 45 A 590 PHE ALA VAL ILE SER GLU LYS VAL ALA GLN SER PHE ILE SEQRES 46 A 590 GLN GLU ALA LEU SER SEQRES 1 T 7 VAL PRO TYR SER SER ALA GLN MODRES 2YDS SER T 395 SER GLYCOSYLATION SITE HET NAG A1618 14 HET CD A1619 1 HET CD A1620 1 HET CD A1621 1 HET CD A1622 1 HET CD A1623 1 HET CD A1624 1 HET CD A1625 1 HET CD A1626 1 HET CD A1627 1 HET CD A1628 1 HET CD A1629 1 HET CD A1630 1 HET CD A1631 1 HET CD A1632 1 HET CD A1633 1 HET CD A1634 1 HET CD A1635 1 HET CD A1636 1 HET CD A1637 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CD CADMIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 CD 19(CD 2+) FORMUL 23 HOH *122(H2 O) HELIX 1 1 ASP A 75 ASN A 89 1 15 HELIX 2 2 ILE A 113 LEU A 120 1 8 HELIX 3 3 ASP A 148 VAL A 163 1 16 HELIX 4 4 THR A 194 ASN A 208 1 15 HELIX 5 5 PRO A 232 ASN A 249 1 18 HELIX 6 6 ASP A 266 ASP A 286 1 21 HELIX 7 7 SER A 303 PHE A 318 1 16 HELIX 8 8 PHE A 318 GLY A 323 1 6 HELIX 9 9 ASP A 336 MET A 340 1 5 HELIX 10 10 ARG A 347 VAL A 357 1 11 HELIX 11 11 PRO A 376 ASP A 388 1 13 HELIX 12 12 GLY A 418 GLN A 421 5 4 HELIX 13 13 HIS A 433 ASN A 450 1 18 HELIX 14 14 ASP A 455 GLY A 469 1 15 HELIX 15 15 LEU A 471 ASN A 480 1 10 HELIX 16 16 ALA A 498 SER A 514 1 17 HELIX 17 17 ALA A 518 LEU A 543 1 26 HELIX 18 18 PRO A 544 ASN A 577 1 34 HELIX 19 19 ASP A 579 SER A 600 1 22 HELIX 20 20 VAL A 608 LEU A 617 1 10 SHEET 1 AA 7 ASN A 52 LYS A 61 0 SHEET 2 AA 7 ASN A 167 ASP A 175 -1 O ILE A 168 N PHE A 60 SHEET 3 AA 7 TYR A 133 ASN A 138 -1 O TYR A 133 N ASP A 175 SHEET 4 AA 7 LYS A 141 GLY A 146 -1 O LYS A 141 N ASN A 138 SHEET 5 AA 7 THR A 103 GLU A 108 1 O THR A 103 N ILE A 142 SHEET 6 AA 7 SER A 65 VAL A 69 1 O ASN A 67 N LEU A 104 SHEET 7 AA 7 GLU A 92 ILE A 93 1 O GLU A 92 N ILE A 66 SHEET 1 AB 9 ALA A 181 GLU A 186 0 SHEET 2 AB 9 VAL A 423 VAL A 428 1 O ASP A 424 N ALA A 181 SHEET 3 AB 9 MET A 391 TRP A 395 1 O MET A 391 N ASP A 424 SHEET 4 AB 9 GLU A 362 TRP A 365 1 O VAL A 363 N ALA A 392 SHEET 5 AB 9 ILE A 329 VAL A 331 1 O THR A 330 N MET A 364 SHEET 6 AB 9 SER A 291 TYR A 295 1 O PHE A 292 N ILE A 329 SHEET 7 AB 9 ASP A 252 ILE A 257 1 O PHE A 253 N SER A 291 SHEET 8 AB 9 THR A 212 TYR A 215 1 O TYR A 213 N VAL A 254 SHEET 9 AB 9 ALA A 181 GLU A 186 1 O ARG A 182 N THR A 212 SHEET 1 AC 2 VAL A 341 SER A 342 0 SHEET 2 AC 2 GLN A 345 PRO A 346 -1 O GLN A 345 N SER A 342 SHEET 1 AD 2 MET A 485 ASP A 486 0 SHEET 2 AD 2 LYS A 492 SER A 493 -1 O SER A 493 N MET A 485 LINK C1 NAG A1618 OG SER T 395 1555 1555 1.44 LINK OE2 GLU A 51 CD CD A1619 1555 1555 1.53 LINK OE1 GLU A 54 CD CD A1620 1555 1555 3.06 LINK OE2 GLU A 54 CD CD A1620 1555 1555 3.11 LINK OD2 ASP A 58 CD CD A1621 1555 1555 2.13 LINK OD1 ASP A 58 CD CD A1621 1555 1555 2.82 LINK O LEU A 68 CD CD A1622 1555 1555 2.42 LINK OE1 GLU A 71 CD CD A1622 1555 1555 2.39 LINK OE2 GLU A 71 CD CD A1622 1555 1555 2.70 LINK O GLU A 73 CD CD A1623 1555 1555 2.28 LINK OE1 GLU A 108 CD CD A1623 1555 1555 2.42 LINK OD1 ASP A 111 CD CD A1623 1555 1555 2.58 LINK OD2 ASP A 111 CD CD A1623 1555 1555 2.78 LINK OD2 ASP A 112 CD CD A1624 1555 1555 2.24 LINK OD1 ASP A 117 CD CD A1625 1555 1555 2.07 LINK OD2 ASP A 117 CD CD A1625 1555 1555 2.78 LINK OD2 ASP A 139 CD CD A1626 1555 1555 2.52 LINK OD1 ASP A 139 CD CD A1626 1555 1555 2.49 LINK OE2 GLU A 145 CD CD A1625 1555 1555 2.53 LINK OE2 GLU A 170 CD CD A1628 1555 1555 2.47 LINK OE1 GLU A 170 CD CD A1628 1555 1555 2.33 LINK OD1 ASP A 252 CD CD A1627 1555 1555 2.55 LINK OD2 ASP A 266 CD CD A1620 6555 1555 2.45 LINK OD2 ASP A 268 CD CD A1626 6555 1555 2.06 LINK OE2 GLU A 272 CD CD A1621 6555 1555 1.78 LINK OE2 GLU A 272 CD CD A1621 1555 5554 1.78 LINK OE1 GLU A 272 CD CD A1621 6555 1555 3.13 LINK OE1 GLU A 272 CD CD A1629 1555 1555 3.00 LINK NE2 HIS A 276 CD CD A1629 1555 1555 2.54 LINK OE1 GLU A 282 CD CD A1630 1555 1555 2.14 LINK OD1 ASP A 286 CD CD A1630 1555 1555 2.55 LINK OD2 ASP A 286 CD CD A1630 1555 1555 2.48 LINK NZ LYS A 306 CD CD A1620 6555 1555 2.71 LINK OE1 GLU A 362 CD CD A1631 1555 1555 2.40 LINK OE2 GLU A 362 CD CD A1631 1555 1555 2.14 LINK OD1 ASP A 388 CD CD A1632 1555 1555 2.52 LINK O LYS A 404 CD CD A1633 1555 1555 2.48 LINK NE2 HIS A 413 CD CD A1634 1555 1555 2.37 LINK OD2 ASP A 424 CD CD A1631 1555 1555 2.34 LINK OD1 ASP A 424 CD CD A1631 1555 1555 2.72 LINK NE2 HIS A 433 CD CD A1633 1555 1555 2.70 LINK OD1 ASN A 450 CD CD A1619 1555 1555 2.57 LINK OD1 ASP A 452 CD CD A1619 1555 1555 2.33 LINK OD2 ASP A 457 CD CD A1636 1555 1555 2.85 LINK OD2 ASP A 474 CD CD A1635 1555 1555 2.52 LINK OD1 ASP A 474 CD CD A1635 1555 1555 2.70 LINK OE2 GLU A 534 CD CD A1635 1555 1555 2.64 LINK OE1 GLU A 534 CD CD A1635 1555 1555 2.82 LINK OE2 GLU A 545 CD CD A1625 2545 1555 2.63 LINK OE1 GLU A 545 CD CD A1625 2545 1555 2.18 LINK OE2 GLU A 545 CD CD A1637 2545 1555 3.12 LINK OE2 GLU A 549 CD CD A1637 2545 1555 2.56 LINK OE1 GLU A 549 CD CD A1637 2545 1555 2.76 LINK OE2 GLU A 550 CD CD A1624 2545 1555 2.09 LINK OE2 GLU A 588 CD CD A1630 2545 1555 2.19 LINK OE1 GLU A 588 CD CD A1630 2545 1555 2.73 LINK CD CD A1619 O HOH A2004 1555 1555 1.87 LINK CD CD A1621 O HOH A2001 1555 1555 2.21 LINK CD CD A1621 O HOH A2059 1555 6555 2.34 LINK CD CD A1622 O HOH A2009 1555 1555 2.46 LINK CD CD A1623 O HOH A2019 1555 1555 2.02 LINK CD CD A1624 O HOH A2020 1555 1555 2.57 LINK CD CD A1624 O HOH A2021 1555 1555 1.87 LINK CD CD A1626 O HOH A2056 1555 6555 1.96 LINK CD CD A1628 O HOH A2007 1555 1555 3.07 LINK CD CD A1628 O HOH A2026 1555 1555 2.12 LINK CD CD A1628 O HOH A2027 1555 1555 2.32 LINK CD CD A1628 O HOH A2033 1555 1555 2.05 LINK CD CD A1629 O HOH A2001 1555 5554 3.13 LINK CD CD A1629 O HOH A2058 1555 1555 1.85 LINK CD CD A1630 O HOH A2062 1555 1555 2.26 LINK CD CD A1630 O HOH A2063 1555 1555 1.95 LINK CD CD A1633 O HOH A2083 1555 1555 2.69 LINK CD CD A1633 O HOH A2091 1555 1555 3.10 LINK CD CD A1635 O HOH A2042 1555 1555 3.09 LINK CD CD A1635 O HOH A2106 1555 1555 2.88 LINK CD CD A1635 O HOH A2115 1555 1555 3.20 LINK CD CD A1636 O HOH A2099 1555 1555 3.21 LINK CD CD A1636 O HOH A2100 1555 1555 2.94 CISPEP 1 ASN A 47 PRO A 48 0 -6.57 CISPEP 2 TYR A 397 PRO A 398 0 11.08 CRYST1 118.090 118.090 148.260 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008468 0.004889 0.000000 0.00000 SCALE2 0.000000 0.009778 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006745 0.00000