PDB Short entry for 2YHS HEADER CELL CYCLE 05-MAY-11 2YHS TITLE STRUCTURE OF THE E. COLI SRP RECEPTOR FTSY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION PROTEIN FTSY; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NG DOMAIN; COMPND 5 SYNONYM: FTSY; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C43 KEYWDS CELL CYCLE, PROTEIN TARGETING, SIMIBI CLASS GTPASE, GTP-BINDING, KEYWDS 2 MEMBRANE, NUCLEOTIDE-BINDING, SIGNAL RECOGNITION PARTICLE, PROTEIN KEYWDS 3 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR G.STJEPANOVIC,G.BANGE,K.WILD,I.SINNING REVDAT 3 20-DEC-23 2YHS 1 REMARK REVDAT 2 06-JUL-11 2YHS 1 JRNL REVDAT 1 18-MAY-11 2YHS 0 JRNL AUTH G.STJEPANOVIC,K.KAPP,G.BANGE,C.GRAF,R.PARLITZ,K.WILD, JRNL AUTH 2 M.P.MAYER,I.SINNING JRNL TITL LIPIDS TRIGGER A CONFORMATIONAL SWITCH THAT REGULATES SIGNAL JRNL TITL 2 RECOGNITION PARTICLE (SRP)-MEDIATED PROTEIN TARGETING. JRNL REF J.BIOL.CHEM. V. 286 23489 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21543314 JRNL DOI 10.1074/JBC.M110.212340 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 36676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1824 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6912 - 3.4465 1.00 3747 210 0.1672 0.1876 REMARK 3 2 3.4465 - 2.7358 1.00 3610 184 0.1666 0.1918 REMARK 3 3 2.7358 - 2.3900 1.00 3533 210 0.1705 0.2355 REMARK 3 4 2.3900 - 2.1715 1.00 3488 202 0.1611 0.2207 REMARK 3 5 2.1715 - 2.0159 0.99 3492 186 0.1596 0.2172 REMARK 3 6 2.0159 - 1.8970 0.98 3459 152 0.1655 0.2500 REMARK 3 7 1.8970 - 1.8020 0.97 3395 189 0.1805 0.2151 REMARK 3 8 1.8020 - 1.7236 0.96 3372 159 0.2072 0.2541 REMARK 3 9 1.7236 - 1.6572 0.97 3379 160 0.2443 0.2942 REMARK 3 10 1.6572 - 1.6000 0.97 3377 172 0.2714 0.3097 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 42.02 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70370 REMARK 3 B22 (A**2) : 1.44950 REMARK 3 B33 (A**2) : -0.74580 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2476 REMARK 3 ANGLE : 1.006 3335 REMARK 3 CHIRALITY : 0.065 386 REMARK 3 PLANARITY : 0.004 434 REMARK 3 DIHEDRAL : 15.253 948 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -27.5794 12.9770 -10.8261 REMARK 3 T TENSOR REMARK 3 T11: 0.0370 T22: 0.0193 REMARK 3 T33: 0.0260 T12: 0.0115 REMARK 3 T13: -0.0051 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.8937 L22: 0.1795 REMARK 3 L33: 0.2194 L12: -0.1938 REMARK 3 L13: 0.2292 L23: -0.1107 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: 0.0694 S13: -0.0818 REMARK 3 S21: -0.0216 S22: 0.0004 S23: 0.0305 REMARK 3 S31: 0.0133 S32: 0.0227 S33: -0.0213 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CRYSTALLIZATION WAS SET UP WITH FULL REMARK 3 -LENGTH FTSY. THE MODEL INCLUDES THE NG PLUS 9 STRUCTURE AND THE REMARK 3 A DOMAIN IS NOT PRESENT IN THE CRYSTALS. REMARK 4 REMARK 4 2YHS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1290048162. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9334 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38500 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 39.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1FTS REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.0, 30% JEFFAMINE ED REMARK 280 -2001 PH 7.0. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.67900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.20600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.67900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.20600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 ARG A 7 REMARK 465 GLY A 8 REMARK 465 PHE A 9 REMARK 465 PHE A 10 REMARK 465 SER A 11 REMARK 465 TRP A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 PHE A 15 REMARK 465 GLY A 16 REMARK 465 GLN A 17 REMARK 465 LYS A 18 REMARK 465 GLU A 19 REMARK 465 GLN A 20 REMARK 465 THR A 21 REMARK 465 PRO A 22 REMARK 465 GLU A 23 REMARK 465 LYS A 24 REMARK 465 GLU A 25 REMARK 465 THR A 26 REMARK 465 GLU A 27 REMARK 465 VAL A 28 REMARK 465 GLN A 29 REMARK 465 ASN A 30 REMARK 465 GLU A 31 REMARK 465 GLN A 32 REMARK 465 PRO A 33 REMARK 465 VAL A 34 REMARK 465 VAL A 35 REMARK 465 GLU A 36 REMARK 465 GLU A 37 REMARK 465 ILE A 38 REMARK 465 VAL A 39 REMARK 465 GLN A 40 REMARK 465 ALA A 41 REMARK 465 GLN A 42 REMARK 465 GLU A 43 REMARK 465 PRO A 44 REMARK 465 VAL A 45 REMARK 465 LYS A 46 REMARK 465 ALA A 47 REMARK 465 SER A 48 REMARK 465 GLU A 49 REMARK 465 GLN A 50 REMARK 465 ALA A 51 REMARK 465 VAL A 52 REMARK 465 GLU A 53 REMARK 465 GLU A 54 REMARK 465 GLN A 55 REMARK 465 PRO A 56 REMARK 465 GLN A 57 REMARK 465 ALA A 58 REMARK 465 HIS A 59 REMARK 465 THR A 60 REMARK 465 GLU A 61 REMARK 465 ALA A 62 REMARK 465 GLU A 63 REMARK 465 ALA A 64 REMARK 465 GLU A 65 REMARK 465 THR A 66 REMARK 465 PHE A 67 REMARK 465 ALA A 68 REMARK 465 ALA A 69 REMARK 465 ASP A 70 REMARK 465 VAL A 71 REMARK 465 VAL A 72 REMARK 465 GLU A 73 REMARK 465 VAL A 74 REMARK 465 THR A 75 REMARK 465 GLU A 76 REMARK 465 GLN A 77 REMARK 465 VAL A 78 REMARK 465 ALA A 79 REMARK 465 GLU A 80 REMARK 465 SER A 81 REMARK 465 GLU A 82 REMARK 465 LYS A 83 REMARK 465 ALA A 84 REMARK 465 GLN A 85 REMARK 465 PRO A 86 REMARK 465 GLU A 87 REMARK 465 ALA A 88 REMARK 465 GLU A 89 REMARK 465 VAL A 90 REMARK 465 VAL A 91 REMARK 465 ALA A 92 REMARK 465 GLN A 93 REMARK 465 PRO A 94 REMARK 465 GLU A 95 REMARK 465 PRO A 96 REMARK 465 VAL A 97 REMARK 465 VAL A 98 REMARK 465 GLU A 99 REMARK 465 GLU A 100 REMARK 465 THR A 101 REMARK 465 PRO A 102 REMARK 465 GLU A 103 REMARK 465 PRO A 104 REMARK 465 VAL A 105 REMARK 465 ALA A 106 REMARK 465 ILE A 107 REMARK 465 GLU A 108 REMARK 465 ARG A 109 REMARK 465 GLU A 110 REMARK 465 GLU A 111 REMARK 465 LEU A 112 REMARK 465 PRO A 113 REMARK 465 LEU A 114 REMARK 465 PRO A 115 REMARK 465 GLU A 116 REMARK 465 ASP A 117 REMARK 465 VAL A 118 REMARK 465 ASN A 119 REMARK 465 ALA A 120 REMARK 465 GLU A 121 REMARK 465 ALA A 122 REMARK 465 VAL A 123 REMARK 465 SER A 124 REMARK 465 PRO A 125 REMARK 465 GLU A 126 REMARK 465 GLU A 127 REMARK 465 TRP A 128 REMARK 465 GLN A 129 REMARK 465 ALA A 130 REMARK 465 GLU A 131 REMARK 465 ALA A 132 REMARK 465 GLU A 133 REMARK 465 THR A 134 REMARK 465 VAL A 135 REMARK 465 GLU A 136 REMARK 465 ILE A 137 REMARK 465 VAL A 138 REMARK 465 GLU A 139 REMARK 465 ALA A 140 REMARK 465 ALA A 141 REMARK 465 GLU A 142 REMARK 465 GLU A 143 REMARK 465 GLU A 144 REMARK 465 ALA A 145 REMARK 465 ALA A 146 REMARK 465 LYS A 147 REMARK 465 GLU A 148 REMARK 465 GLU A 149 REMARK 465 ILE A 150 REMARK 465 THR A 151 REMARK 465 ASP A 152 REMARK 465 GLU A 153 REMARK 465 GLU A 154 REMARK 465 LEU A 155 REMARK 465 GLU A 156 REMARK 465 THR A 157 REMARK 465 ALA A 158 REMARK 465 LEU A 159 REMARK 465 ALA A 160 REMARK 465 ALA A 161 REMARK 465 GLU A 162 REMARK 465 ALA A 163 REMARK 465 ALA A 164 REMARK 465 GLU A 165 REMARK 465 GLU A 166 REMARK 465 ALA A 167 REMARK 465 VAL A 168 REMARK 465 MET A 169 REMARK 465 VAL A 170 REMARK 465 VAL A 171 REMARK 465 PRO A 172 REMARK 465 PRO A 173 REMARK 465 ALA A 174 REMARK 465 GLU A 175 REMARK 465 GLU A 176 REMARK 465 GLU A 177 REMARK 465 GLN A 178 REMARK 465 PRO A 179 REMARK 465 VAL A 180 REMARK 465 GLU A 181 REMARK 465 GLU A 182 REMARK 465 ILE A 183 REMARK 465 ALA A 184 REMARK 465 GLN A 185 REMARK 465 GLU A 186 REMARK 465 GLN A 187 REMARK 465 GLU A 496 REMARK 465 ASP A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 HIS A 503 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 239 32.10 70.39 REMARK 500 GLN A 260 52.85 39.05 REMARK 500 GLU A 284 96.16 -164.81 REMARK 500 LEU A 387 118.56 -32.80 REMARK 500 GLN A 388 -166.74 -75.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1496 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1497 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1498 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FTS RELATED DB: PDB REMARK 900 SIGNAL RECOGNITION PARTICLE RECEPTOR FROM E. COLI REMARK 900 RELATED ID: 2XXA RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE (SRP) IN REMARK 900 COMPLEX WITH ITS RECEPTOR(SR) DBREF 2YHS A 1 497 UNP P10121 FTSY_ECOLI 1 497 SEQADV 2YHS HIS A 498 UNP P10121 EXPRESSION TAG SEQADV 2YHS HIS A 499 UNP P10121 EXPRESSION TAG SEQADV 2YHS HIS A 500 UNP P10121 EXPRESSION TAG SEQADV 2YHS HIS A 501 UNP P10121 EXPRESSION TAG SEQADV 2YHS HIS A 502 UNP P10121 EXPRESSION TAG SEQADV 2YHS HIS A 503 UNP P10121 EXPRESSION TAG SEQRES 1 A 503 MET ALA LYS GLU LYS LYS ARG GLY PHE PHE SER TRP LEU SEQRES 2 A 503 GLY PHE GLY GLN LYS GLU GLN THR PRO GLU LYS GLU THR SEQRES 3 A 503 GLU VAL GLN ASN GLU GLN PRO VAL VAL GLU GLU ILE VAL SEQRES 4 A 503 GLN ALA GLN GLU PRO VAL LYS ALA SER GLU GLN ALA VAL SEQRES 5 A 503 GLU GLU GLN PRO GLN ALA HIS THR GLU ALA GLU ALA GLU SEQRES 6 A 503 THR PHE ALA ALA ASP VAL VAL GLU VAL THR GLU GLN VAL SEQRES 7 A 503 ALA GLU SER GLU LYS ALA GLN PRO GLU ALA GLU VAL VAL SEQRES 8 A 503 ALA GLN PRO GLU PRO VAL VAL GLU GLU THR PRO GLU PRO SEQRES 9 A 503 VAL ALA ILE GLU ARG GLU GLU LEU PRO LEU PRO GLU ASP SEQRES 10 A 503 VAL ASN ALA GLU ALA VAL SER PRO GLU GLU TRP GLN ALA SEQRES 11 A 503 GLU ALA GLU THR VAL GLU ILE VAL GLU ALA ALA GLU GLU SEQRES 12 A 503 GLU ALA ALA LYS GLU GLU ILE THR ASP GLU GLU LEU GLU SEQRES 13 A 503 THR ALA LEU ALA ALA GLU ALA ALA GLU GLU ALA VAL MET SEQRES 14 A 503 VAL VAL PRO PRO ALA GLU GLU GLU GLN PRO VAL GLU GLU SEQRES 15 A 503 ILE ALA GLN GLU GLN GLU LYS PRO THR LYS GLU GLY PHE SEQRES 16 A 503 PHE ALA ARG LEU LYS ARG SER LEU LEU LYS THR LYS GLU SEQRES 17 A 503 ASN LEU GLY SER GLY PHE ILE SER LEU PHE ARG GLY LYS SEQRES 18 A 503 LYS ILE ASP ASP ASP LEU PHE GLU GLU LEU GLU GLU GLN SEQRES 19 A 503 LEU LEU ILE ALA ASP VAL GLY VAL GLU THR THR ARG LYS SEQRES 20 A 503 ILE ILE THR ASN LEU THR GLU GLY ALA SER ARG LYS GLN SEQRES 21 A 503 LEU ARG ASP ALA GLU ALA LEU TYR GLY LEU LEU LYS GLU SEQRES 22 A 503 GLU MET GLY GLU ILE LEU ALA LYS VAL ASP GLU PRO LEU SEQRES 23 A 503 ASN VAL GLU GLY LYS ALA PRO PHE VAL ILE LEU MET VAL SEQRES 24 A 503 GLY VAL ASN GLY VAL GLY LYS THR THR THR ILE GLY LYS SEQRES 25 A 503 LEU ALA ARG GLN PHE GLU GLN GLN GLY LYS SER VAL MET SEQRES 26 A 503 LEU ALA ALA GLY ASP THR PHE ARG ALA ALA ALA VAL GLU SEQRES 27 A 503 GLN LEU GLN VAL TRP GLY GLN ARG ASN ASN ILE PRO VAL SEQRES 28 A 503 ILE ALA GLN HIS THR GLY ALA ASP SER ALA SER VAL ILE SEQRES 29 A 503 PHE ASP ALA ILE GLN ALA ALA LYS ALA ARG ASN ILE ASP SEQRES 30 A 503 VAL LEU ILE ALA ASP THR ALA GLY ARG LEU GLN ASN LYS SEQRES 31 A 503 SER HIS LEU MET GLU GLU LEU LYS LYS ILE VAL ARG VAL SEQRES 32 A 503 MET LYS LYS LEU ASP VAL GLU ALA PRO HIS GLU VAL MET SEQRES 33 A 503 LEU THR ILE ASP ALA SER THR GLY GLN ASN ALA VAL SER SEQRES 34 A 503 GLN ALA LYS LEU PHE HIS GLU ALA VAL GLY LEU THR GLY SEQRES 35 A 503 ILE THR LEU THR LYS LEU ASP GLY THR ALA LYS GLY GLY SEQRES 36 A 503 VAL ILE PHE SER VAL ALA ASP GLN PHE GLY ILE PRO ILE SEQRES 37 A 503 ARG TYR ILE GLY VAL GLY GLU ARG ILE GLU ASP LEU ARG SEQRES 38 A 503 PRO PHE LYS ALA ASP ASP PHE ILE GLU ALA LEU PHE ALA SEQRES 39 A 503 ARG GLU ASP HIS HIS HIS HIS HIS HIS HET EDO A1496 4 HET EDO A1497 4 HET EDO A1498 4 HET EDO A1499 4 HET EDO A1500 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 5(C2 H6 O2) FORMUL 7 HOH *214(H2 O) HELIX 1 1 THR A 191 LEU A 203 1 13 HELIX 2 2 LEU A 203 GLU A 208 1 6 HELIX 3 3 LEU A 210 SER A 212 5 3 HELIX 4 4 GLY A 213 ARG A 219 1 7 HELIX 5 5 ASP A 224 ALA A 238 1 15 HELIX 6 6 GLY A 241 GLN A 260 1 20 HELIX 7 7 ALA A 266 LYS A 281 1 16 HELIX 8 8 GLY A 305 GLN A 320 1 16 HELIX 9 9 ARG A 333 ASN A 348 1 16 HELIX 10 10 ASP A 359 ARG A 374 1 16 HELIX 11 11 ASN A 389 LYS A 406 1 18 HELIX 12 12 GLY A 424 VAL A 438 1 15 HELIX 13 13 LYS A 447 THR A 451 5 5 HELIX 14 14 GLY A 455 GLY A 465 1 11 HELIX 15 15 ARG A 476 GLU A 478 5 3 HELIX 16 16 LYS A 484 ALA A 494 1 11 SHEET 1 AA 8 VAL A 351 ILE A 352 0 SHEET 2 AA 8 VAL A 324 ALA A 327 1 O LEU A 326 N ILE A 352 SHEET 3 AA 8 VAL A 378 ALA A 381 1 O VAL A 378 N MET A 325 SHEET 4 AA 8 PHE A 294 VAL A 299 1 O PHE A 294 N LEU A 379 SHEET 5 AA 8 GLU A 414 ASP A 420 1 O GLU A 414 N LEU A 297 SHEET 6 AA 8 GLY A 442 THR A 446 1 O GLY A 442 N LEU A 417 SHEET 7 AA 8 ILE A 468 GLY A 472 1 N ARG A 469 O ILE A 443 SHEET 8 AA 8 LEU A 480 PRO A 482 -1 O ARG A 481 N ILE A 471 CISPEP 1 ALA A 292 PRO A 293 0 -2.48 CISPEP 2 ALA A 411 PRO A 412 0 -1.18 SITE 1 AC1 8 THR A 307 THR A 308 GLY A 311 GLN A 339 SITE 2 AC1 8 TRP A 343 LYS A 405 VAL A 409 HOH A2107 SITE 1 AC2 2 GLN A 341 GLN A 354 SITE 1 AC3 6 GLU A 318 SER A 323 VAL A 324 ASN A 348 SITE 2 AC3 6 PRO A 350 ILE A 376 SITE 1 AC4 6 ILE A 471 ARG A 481 PRO A 482 PHE A 483 SITE 2 AC4 6 LYS A 484 PHE A 488 SITE 1 AC5 5 ARG A 198 VAL A 473 ASP A 479 ARG A 481 SITE 2 AC5 5 HOH A2006 CRYST1 79.358 108.412 31.902 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012601 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009224 0.000000 0.00000 SCALE3 0.000000 0.000000 0.031346 0.00000