PDB Short entry for 2YOQ HEADER APOPTOSIS 26-OCT-12 2YOQ TITLE STRUCTURE OF FAM3B PANDER E30 CONSTRUCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FAM3B; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: CYTOKINE-LIKE PROTEIN 2-21, PANCREATIC-DERIVED FACTOR, COMPND 5 PANDER; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS APOPTOSIS, DIABETES, ILEI, EMT EXPDTA X-RAY DIFFRACTION AUTHOR P.JOHANSSON,J.BERNSTROM,T.GORMAN,L.OSTER,S.BACKSTROM,F.SCHWEIKART, AUTHOR 2 B.XU,Y.XUE,L.HOLMBERG SCHIAVONE REVDAT 2 20-FEB-13 2YOQ 1 JRNL REVDAT 1 30-JAN-13 2YOQ 0 JRNL AUTH P.JOHANSSON,J.BERNSTROM,T.GORMAN,L.OSTER,S.BACKSTROM, JRNL AUTH 2 F.SCHWEIKART,B.XU,Y.XUE,L.H.SCHIAVONE JRNL TITL FAM3B PANDER AND FAM3C ILEI REPRESENT A DISTINCT CLASS OF JRNL TITL 2 SIGNALING MOLECULES WITH A NON-CYTOKINE-LIKE FOLD. JRNL REF STRUCTURE V. 21 306 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23333428 JRNL DOI 10.1016/J.STR.2012.12.009 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,WOMACK; REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.80 REMARK 3 NUMBER OF REFLECTIONS : 33459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.1599 REMARK 3 R VALUE (WORKING SET) : 0.1583 REMARK 3 FREE R VALUE : 0.1897 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.05 REMARK 3 FREE R VALUE TEST SET COUNT : 1690 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 17 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.42 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2830 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2135 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2692 REMARK 3 BIN R VALUE (WORKING SET) : 0.2099 REMARK 3 BIN FREE R VALUE : 0.2846 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.88 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 138 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4276 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 412 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.1405 REMARK 3 B22 (A**2) : -3.1405 REMARK 3 B33 (A**2) : 6.2810 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : 0.0000 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.226 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.215 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.167 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.211 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.167 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.9457 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.9344 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4390 ; 2.00 ; HARMONIC REMARK 3 BOND ANGLES : 5902 ; 2.00 ; HARMONIC REMARK 3 TORSION ANGLES : 1566 ; 2.00 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 113 ; 2.00 ; HARMONIC REMARK 3 GENERAL PLANES : 629 ; 5.00 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4390 ; 20.00 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 554 ; 5.00 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5052 ; 4.00 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.16 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.59 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.03 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY REMARK 4 REMARK 4 2YOQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-12. REMARK 100 THE PDBE ID CODE IS EBI-54601. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33513 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.35 REMARK 200 RESOLUTION RANGE LOW (A) : 34.47 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.3 REMARK 200 R MERGE (I) : 0.13 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.20 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.1 REMARK 200 R MERGE FOR SHELL (I) : 0.79 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.2 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.09333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.18667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 30 REMARK 465 LEU A 31 REMARK 465 ILE A 32 REMARK 465 PRO A 33 REMARK 465 ASP A 34 REMARK 465 VAL A 35 REMARK 465 PRO A 36 REMARK 465 LEU A 37 REMARK 465 SER A 38 REMARK 465 SER A 39 REMARK 465 THR A 40 REMARK 465 LEU A 41 REMARK 465 TYR A 42 REMARK 465 ASN A 43 REMARK 465 ILE A 44 REMARK 465 ARG A 45 REMARK 465 SER A 46 REMARK 465 ILE A 47 REMARK 465 GLY A 48 REMARK 465 GLU A 49 REMARK 465 ARG A 50 REMARK 465 PRO A 51 REMARK 465 VAL A 52 REMARK 465 LEU A 53 REMARK 465 LYS A 54 REMARK 465 ALA A 55 REMARK 465 PRO A 56 REMARK 465 ALA A 57 REMARK 465 PRO A 58 REMARK 465 LYS A 59 REMARK 465 ASP A 241 REMARK 465 ASP A 242 REMARK 465 LYS A 243 REMARK 465 GLU B 30 REMARK 465 LEU B 31 REMARK 465 ILE B 32 REMARK 465 PRO B 33 REMARK 465 ASP B 34 REMARK 465 VAL B 35 REMARK 465 PRO B 36 REMARK 465 LEU B 37 REMARK 465 SER B 38 REMARK 465 SER B 39 REMARK 465 THR B 40 REMARK 465 LEU B 41 REMARK 465 TYR B 42 REMARK 465 ASN B 43 REMARK 465 ILE B 44 REMARK 465 ARG B 45 REMARK 465 SER B 46 REMARK 465 ILE B 47 REMARK 465 GLY B 48 REMARK 465 GLU B 49 REMARK 465 ARG B 50 REMARK 465 PRO B 51 REMARK 465 VAL B 52 REMARK 465 LEU B 53 REMARK 465 LYS B 54 REMARK 465 ALA B 55 REMARK 465 PRO B 56 REMARK 465 ALA B 57 REMARK 465 PRO B 58 REMARK 465 LYS B 59 REMARK 465 ASP B 241 REMARK 465 ASP B 242 REMARK 465 LYS B 243 REMARK 465 GLU C 30 REMARK 465 LEU C 31 REMARK 465 ILE C 32 REMARK 465 PRO C 33 REMARK 465 ASP C 34 REMARK 465 VAL C 35 REMARK 465 PRO C 36 REMARK 465 LEU C 37 REMARK 465 SER C 38 REMARK 465 SER C 39 REMARK 465 THR C 40 REMARK 465 LEU C 41 REMARK 465 TYR C 42 REMARK 465 ASN C 43 REMARK 465 ILE C 44 REMARK 465 ARG C 45 REMARK 465 SER C 46 REMARK 465 ILE C 47 REMARK 465 GLY C 48 REMARK 465 GLU C 49 REMARK 465 ARG C 50 REMARK 465 PRO C 51 REMARK 465 VAL C 52 REMARK 465 LEU C 53 REMARK 465 LYS C 54 REMARK 465 ALA C 55 REMARK 465 PRO C 56 REMARK 465 ALA C 57 REMARK 465 PRO C 58 REMARK 465 LYS C 59 REMARK 465 ASP C 240 REMARK 465 ASP C 241 REMARK 465 ASP C 242 REMARK 465 LYS C 243 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 157 -76.07 71.42 REMARK 500 ASP B 157 -66.98 71.60 REMARK 500 ASP C 157 -68.41 71.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 VAL A 114 23.4 L L OUTSIDE RANGE REMARK 500 ILE A 122 24.3 L L OUTSIDE RANGE REMARK 500 VAL B 114 23.3 L L OUTSIDE RANGE REMARK 500 ILE B 122 25.0 L L OUTSIDE RANGE REMARK 500 VAL C 114 23.4 L L OUTSIDE RANGE REMARK 500 ILE C 122 24.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C1195 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YOP RELATED DB: PDB REMARK 900 LONG WAVELENGTH S-SAD STRUCTURE OF FAM3B PANDER DBREF 2YOQ A 30 235 UNP Q9D309 FAM3B_MOUSE 30 235 DBREF 2YOQ B 30 235 UNP Q9D309 FAM3B_MOUSE 30 235 DBREF 2YOQ C 30 235 UNP Q9D309 FAM3B_MOUSE 30 235 SEQADV 2YOQ ASP A 236 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ TYR A 237 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ LYS A 238 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP A 239 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP A 240 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP A 241 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP A 242 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ LYS A 243 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP B 236 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ TYR B 237 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ LYS B 238 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP B 239 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP B 240 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP B 241 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP B 242 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ LYS B 243 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP C 236 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ TYR C 237 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ LYS C 238 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP C 239 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP C 240 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP C 241 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ ASP C 242 UNP Q9D309 EXPRESSION TAG SEQADV 2YOQ LYS C 243 UNP Q9D309 EXPRESSION TAG SEQRES 1 A 214 GLU LEU ILE PRO ASP VAL PRO LEU SER SER THR LEU TYR SEQRES 2 A 214 ASN ILE ARG SER ILE GLY GLU ARG PRO VAL LEU LYS ALA SEQRES 3 A 214 PRO ALA PRO LYS ARG GLN LYS CYS ASP HIS TRP SER PRO SEQRES 4 A 214 CYS PRO PRO ASP THR TYR ALA TYR ARG LEU LEU SER GLY SEQRES 5 A 214 GLY GLY ARG ASP LYS TYR ALA LYS ILE CYS PHE GLU ASP SEQRES 6 A 214 GLU VAL LEU ILE GLY GLU LYS THR GLY ASN VAL ALA ARG SEQRES 7 A 214 GLY ILE ASN ILE ALA VAL VAL ASN TYR GLU THR GLY LYS SEQRES 8 A 214 VAL ILE ALA THR LYS TYR PHE ASP MET TYR GLU GLY ASP SEQRES 9 A 214 ASN SER GLY PRO MET ALA LYS PHE ILE GLN SER THR PRO SEQRES 10 A 214 SER LYS SER LEU LEU PHE MET VAL THR HIS ASP ASP GLY SEQRES 11 A 214 SER SER LYS LEU LYS ALA GLN ALA LYS ASP ALA ILE GLU SEQRES 12 A 214 ALA LEU GLY SER LYS GLU ILE LYS ASN MET LYS PHE ARG SEQRES 13 A 214 SER SER TRP VAL PHE VAL ALA ALA LYS GLY PHE GLU LEU SEQRES 14 A 214 PRO SER GLU ILE GLU ARG GLU LYS ILE ASN HIS SER ASP SEQRES 15 A 214 GLN SER ARG ASN ARG TYR ALA GLY TRP PRO ALA GLU ILE SEQRES 16 A 214 GLN ILE GLU GLY CYS ILE PRO LYS GLY LEU ARG ASP TYR SEQRES 17 A 214 LYS ASP ASP ASP ASP LYS SEQRES 1 B 214 GLU LEU ILE PRO ASP VAL PRO LEU SER SER THR LEU TYR SEQRES 2 B 214 ASN ILE ARG SER ILE GLY GLU ARG PRO VAL LEU LYS ALA SEQRES 3 B 214 PRO ALA PRO LYS ARG GLN LYS CYS ASP HIS TRP SER PRO SEQRES 4 B 214 CYS PRO PRO ASP THR TYR ALA TYR ARG LEU LEU SER GLY SEQRES 5 B 214 GLY GLY ARG ASP LYS TYR ALA LYS ILE CYS PHE GLU ASP SEQRES 6 B 214 GLU VAL LEU ILE GLY GLU LYS THR GLY ASN VAL ALA ARG SEQRES 7 B 214 GLY ILE ASN ILE ALA VAL VAL ASN TYR GLU THR GLY LYS SEQRES 8 B 214 VAL ILE ALA THR LYS TYR PHE ASP MET TYR GLU GLY ASP SEQRES 9 B 214 ASN SER GLY PRO MET ALA LYS PHE ILE GLN SER THR PRO SEQRES 10 B 214 SER LYS SER LEU LEU PHE MET VAL THR HIS ASP ASP GLY SEQRES 11 B 214 SER SER LYS LEU LYS ALA GLN ALA LYS ASP ALA ILE GLU SEQRES 12 B 214 ALA LEU GLY SER LYS GLU ILE LYS ASN MET LYS PHE ARG SEQRES 13 B 214 SER SER TRP VAL PHE VAL ALA ALA LYS GLY PHE GLU LEU SEQRES 14 B 214 PRO SER GLU ILE GLU ARG GLU LYS ILE ASN HIS SER ASP SEQRES 15 B 214 GLN SER ARG ASN ARG TYR ALA GLY TRP PRO ALA GLU ILE SEQRES 16 B 214 GLN ILE GLU GLY CYS ILE PRO LYS GLY LEU ARG ASP TYR SEQRES 17 B 214 LYS ASP ASP ASP ASP LYS SEQRES 1 C 214 GLU LEU ILE PRO ASP VAL PRO LEU SER SER THR LEU TYR SEQRES 2 C 214 ASN ILE ARG SER ILE GLY GLU ARG PRO VAL LEU LYS ALA SEQRES 3 C 214 PRO ALA PRO LYS ARG GLN LYS CYS ASP HIS TRP SER PRO SEQRES 4 C 214 CYS PRO PRO ASP THR TYR ALA TYR ARG LEU LEU SER GLY SEQRES 5 C 214 GLY GLY ARG ASP LYS TYR ALA LYS ILE CYS PHE GLU ASP SEQRES 6 C 214 GLU VAL LEU ILE GLY GLU LYS THR GLY ASN VAL ALA ARG SEQRES 7 C 214 GLY ILE ASN ILE ALA VAL VAL ASN TYR GLU THR GLY LYS SEQRES 8 C 214 VAL ILE ALA THR LYS TYR PHE ASP MET TYR GLU GLY ASP SEQRES 9 C 214 ASN SER GLY PRO MET ALA LYS PHE ILE GLN SER THR PRO SEQRES 10 C 214 SER LYS SER LEU LEU PHE MET VAL THR HIS ASP ASP GLY SEQRES 11 C 214 SER SER LYS LEU LYS ALA GLN ALA LYS ASP ALA ILE GLU SEQRES 12 C 214 ALA LEU GLY SER LYS GLU ILE LYS ASN MET LYS PHE ARG SEQRES 13 C 214 SER SER TRP VAL PHE VAL ALA ALA LYS GLY PHE GLU LEU SEQRES 14 C 214 PRO SER GLU ILE GLU ARG GLU LYS ILE ASN HIS SER ASP SEQRES 15 C 214 GLN SER ARG ASN ARG TYR ALA GLY TRP PRO ALA GLU ILE SEQRES 16 C 214 GLN ILE GLU GLY CYS ILE PRO LYS GLY LEU ARG ASP TYR SEQRES 17 C 214 LYS ASP ASP ASP ASP LYS HET GOL A1196 6 HET GOL B1196 6 HET GOL C1195 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 3(C3 H8 O3) FORMUL 5 HOH *412(H2 O) HELIX 1 1 GLN A 61 HIS A 65 5 5 HELIX 2 2 ASN A 134 SER A 144 1 11 HELIX 3 3 LYS A 164 ALA A 173 1 10 HELIX 4 4 GLU A 178 MET A 182 5 5 HELIX 5 5 GLN B 61 HIS B 65 5 5 HELIX 6 6 ASN B 134 SER B 144 1 11 HELIX 7 7 LYS B 164 ALA B 173 1 10 HELIX 8 8 GLU B 178 MET B 182 5 5 HELIX 9 9 GLN C 61 HIS C 65 5 5 HELIX 10 10 ASN C 134 SER C 144 1 11 HELIX 11 11 LYS C 164 LEU C 174 1 11 HELIX 12 12 GLU C 178 MET C 182 5 5 SHEET 1 AA 4 GLU A 95 ILE A 98 0 SHEET 2 AA 4 LYS A 89 PHE A 92 -1 O ILE A 90 N LEU A 97 SHEET 3 AA 4 THR A 73 LEU A 79 -1 O ARG A 77 N CYS A 91 SHEET 4 AA 4 GLN A 225 PRO A 231 -1 O ILE A 226 N LEU A 78 SHEET 1 AB 5 VAL A 121 PHE A 127 0 SHEET 2 AB 5 GLY A 108 ASN A 115 -1 O ILE A 109 N PHE A 127 SHEET 3 AB 5 SER A 149 HIS A 156 -1 O LEU A 150 N VAL A 114 SHEET 4 AB 5 SER A 187 LYS A 194 -1 O TRP A 188 N THR A 155 SHEET 5 AB 5 GLU A 205 ASN A 208 -1 O LYS A 206 N VAL A 189 SHEET 1 BA 4 GLU B 95 ILE B 98 0 SHEET 2 BA 4 LYS B 89 PHE B 92 -1 O ILE B 90 N LEU B 97 SHEET 3 BA 4 THR B 73 LEU B 79 -1 O ARG B 77 N CYS B 91 SHEET 4 BA 4 GLN B 225 PRO B 231 -1 O ILE B 226 N LEU B 78 SHEET 1 BB 5 VAL B 121 PHE B 127 0 SHEET 2 BB 5 GLY B 108 ASN B 115 -1 O ILE B 109 N PHE B 127 SHEET 3 BB 5 SER B 149 HIS B 156 -1 O LEU B 150 N VAL B 114 SHEET 4 BB 5 SER B 187 LYS B 194 -1 O TRP B 188 N THR B 155 SHEET 5 BB 5 GLU B 205 ASN B 208 -1 O LYS B 206 N VAL B 189 SHEET 1 CA 4 GLU C 95 ILE C 98 0 SHEET 2 CA 4 LYS C 89 PHE C 92 -1 O ILE C 90 N LEU C 97 SHEET 3 CA 4 THR C 73 LEU C 79 -1 O ARG C 77 N CYS C 91 SHEET 4 CA 4 GLN C 225 PRO C 231 -1 O ILE C 226 N LEU C 78 SHEET 1 CB 5 VAL C 121 PHE C 127 0 SHEET 2 CB 5 GLY C 108 ASN C 115 -1 O ILE C 109 N PHE C 127 SHEET 3 CB 5 SER C 149 HIS C 156 -1 O LEU C 150 N VAL C 114 SHEET 4 CB 5 SER C 187 LYS C 194 -1 O TRP C 188 N THR C 155 SHEET 5 CB 5 GLU C 205 ASN C 208 -1 O LYS C 206 N VAL C 189 SSBOND 1 CYS A 63 CYS A 91 1555 1555 2.12 SSBOND 2 CYS A 69 CYS A 229 1555 1555 2.04 SSBOND 3 CYS B 63 CYS B 91 1555 1555 2.11 SSBOND 4 CYS B 69 CYS B 229 1555 1555 2.05 SSBOND 5 CYS C 63 CYS C 91 1555 1555 2.11 SSBOND 6 CYS C 69 CYS C 229 1555 1555 2.04 CISPEP 1 GLY C 82 GLY C 83 0 -17.47 SITE 1 AC1 6 ARG A 107 TYR A 130 ASP A 157 ASP A 158 SITE 2 AC1 6 PHE A 184 ARG A 185 SITE 1 AC2 5 ARG B 107 TYR B 130 ASP B 157 ARG B 185 SITE 2 AC2 5 HOH B2065 SITE 1 AC3 6 ARG C 107 TYR C 130 ASP C 157 PHE C 184 SITE 2 AC3 6 ARG C 185 HOH C2126 CRYST1 86.540 86.540 96.280 90.00 90.00 120.00 P 31 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011555 0.006671 0.000000 0.00000 SCALE2 0.000000 0.013343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010386 0.00000 MTRIX1 1 0.584000 0.811000 -0.016000 37.75400 1 MTRIX2 1 0.811000 -0.584000 0.000000 -24.81700 1 MTRIX3 1 -0.009000 -0.013000 -1.000000 -76.47000 1 MTRIX1 2 0.401000 0.916000 -0.026000 4.80800 1 MTRIX2 2 0.916000 -0.401000 -0.009000 -50.13200 1 MTRIX3 2 -0.018000 -0.020000 -1.000000 -75.64800 1