PDB Short entry for 2YU1 HEADER OXIDOREDUCTASE 05-APR-07 2YU1 TITLE CRYSTAL STRUCTURE OF HJHDM1A COMPLEXED WITH A-KETOGLUTARATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-383, RESIDUES 450-517; COMPND 5 SYNONYM: [HISTONE-H3]-LYSINE-36 DEMETHYLASE 1A, F-BOX/LRR- REPEAT COMPND 6 PROTEIN 11, F-BOX AND LEUCINE-RICH REPEAT PROTEIN 11, F-BOX PROTEIN COMPND 7 FBL7, F-BOX PROTEIN LILINA; COMPND 8 EC: 1.14.11.27; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HJHDM1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B, PET21B KEYWDS JMJC-DOMAIN-CONTAINING HISTONE DEMETHYLASES, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.HAN REVDAT 6 10-NOV-21 2YU1 1 REMARK SEQADV LINK REVDAT 5 09-AUG-17 2YU1 1 SOURCE REMARK REVDAT 4 13-JUL-11 2YU1 1 VERSN REVDAT 3 08-DEC-09 2YU1 1 HETNAM REVDAT 2 24-FEB-09 2YU1 1 VERSN REVDAT 1 24-APR-07 2YU1 0 JRNL AUTH Z.HAN,P.LIU,L.GU,Y.ZHANG,H.LI,S.CHEN,J.CHAI JRNL TITL STRUCTURAL BASIS FOR HISTONE DEMETHYLATION BY JHDM1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 663 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3170 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 2.022 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000027133. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13446 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.28900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1M NACL, 0.1M TRIS, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.33667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 82.67333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 82.67333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 41.33667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 ARG A 7 REMARK 465 ILE A 8 REMARK 465 ARG A 9 REMARK 465 TYR A 10 REMARK 465 SER A 11 REMARK 465 GLN A 12 REMARK 465 ARG A 13 REMARK 465 LEU A 14 REMARK 465 ARG A 15 REMARK 465 GLY A 16 REMARK 465 THR A 17 REMARK 465 MET A 18 REMARK 465 ARG A 19 REMARK 465 ARG A 20 REMARK 465 ARG A 21 REMARK 465 TYR A 22 REMARK 465 GLU A 23 REMARK 465 ASP A 24 REMARK 465 ASP A 25 REMARK 465 GLY A 26 REMARK 465 ILE A 27 REMARK 465 SER A 28 REMARK 465 ASP A 29 REMARK 465 ASP A 30 REMARK 465 GLU A 31 REMARK 465 ILE A 32 REMARK 465 GLU A 33 REMARK 465 GLY A 34 REMARK 465 LYS A 35 REMARK 465 SER A 180 REMARK 465 GLN A 181 REMARK 465 THR A 182 REMARK 465 GLU A 183 REMARK 465 SER A 184 REMARK 465 THR A 185 REMARK 465 ASN A 186 REMARK 465 ALA A 187 REMARK 465 ILE A 188 REMARK 465 LEU A 189 REMARK 465 GLU A 190 REMARK 465 LEU A 365 REMARK 465 ASN A 366 REMARK 465 GLY A 367 REMARK 465 LEU A 368 REMARK 465 GLU A 369 REMARK 465 SER A 370 REMARK 465 GLY A 371 REMARK 465 ASN A 372 REMARK 465 GLY A 373 REMARK 465 ASP A 374 REMARK 465 GLU A 375 REMARK 465 GLU A 376 REMARK 465 ALA A 377 REMARK 465 VAL A 378 REMARK 465 ASP A 379 REMARK 465 ARG A 380 REMARK 465 GLU A 381 REMARK 465 PRO A 382 REMARK 465 ARG A 383 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 LYS A 195 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 47 64.78 -108.37 REMARK 500 ASN A 52 76.97 -117.57 REMARK 500 PRO A 91 -9.34 -59.36 REMARK 500 MET A 100 -71.39 -91.58 REMARK 500 SER A 104 177.70 -58.54 REMARK 500 ARG A 105 23.86 44.55 REMARK 500 MET A 107 128.39 -28.39 REMARK 500 VAL A 113 6.14 -49.13 REMARK 500 THR A 115 -75.81 -178.76 REMARK 500 GLN A 116 156.21 157.00 REMARK 500 LYS A 117 -83.34 82.02 REMARK 500 PRO A 133 142.80 -38.90 REMARK 500 LEU A 146 101.01 -56.62 REMARK 500 SER A 149 -13.40 -43.83 REMARK 500 ASN A 155 17.98 -65.98 REMARK 500 TYR A 193 135.76 -177.00 REMARK 500 PRO A 194 99.22 -58.56 REMARK 500 VAL A 196 44.25 -143.14 REMARK 500 PRO A 236 44.77 -67.18 REMARK 500 SER A 250 7.77 -69.61 REMARK 500 GLN A 253 -54.52 -1.82 REMARK 500 ASN A 304 51.58 -150.71 REMARK 500 ASN A 322 -8.18 -50.97 REMARK 500 CYS A 477 50.01 33.24 REMARK 500 PRO A 479 179.61 -56.02 REMARK 500 GLU A 483 -94.10 -60.84 REMARK 500 LEU A 508 62.07 -65.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 600 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 212 NE2 REMARK 620 2 ASP A 214 OD1 76.3 REMARK 620 3 ASP A 214 OD2 128.4 52.1 REMARK 620 4 HIS A 284 NE2 79.0 99.2 107.2 REMARK 620 5 AKG A 701 O1 72.0 86.7 101.1 148.1 REMARK 620 6 AKG A 701 O2 73.5 146.6 154.3 88.8 70.8 REMARK 620 7 AKG A 701 C1 79.3 123.4 125.9 124.9 37.1 36.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YU2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT A-KETOGLUTARATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS PROTEIN CONSISTS OF TWO PARTS OF HJHDM1A AND RESIDUES REMARK 999 NUMBERING IN THE COORDINATES FOLLOWS DATABASE NUMBERING OF REMARK 999 Q9Y2K7, THEREFORE IT IS NON-SEQUENTIAL RESIDUE NUMBERING. DBREF 2YU1 A 1 383 UNP Q9Y2K7 JHD1A_HUMAN 1 383 DBREF 2YU1 A 450 517 UNP Q9Y2K7 JHD1A_HUMAN 450 517 SEQADV 2YU1 SER A 252 UNP Q9Y2K7 LYS 252 ENGINEERED MUTATION SEQRES 1 A 451 MET GLU PRO GLU GLU GLU ARG ILE ARG TYR SER GLN ARG SEQRES 2 A 451 LEU ARG GLY THR MET ARG ARG ARG TYR GLU ASP ASP GLY SEQRES 3 A 451 ILE SER ASP ASP GLU ILE GLU GLY LYS ARG THR PHE ASP SEQRES 4 A 451 LEU GLU GLU LYS LEU HIS THR ASN LYS TYR ASN ALA ASN SEQRES 5 A 451 PHE VAL THR PHE MET GLU GLY LYS ASP PHE ASN VAL GLU SEQRES 6 A 451 TYR ILE GLN ARG GLY GLY LEU ARG ASP PRO LEU ILE PHE SEQRES 7 A 451 LYS ASN SER ASP GLY LEU GLY ILE LYS MET PRO ASP PRO SEQRES 8 A 451 ASP PHE THR VAL ASN ASP VAL LYS MET CYS VAL GLY SER SEQRES 9 A 451 ARG ARG MET VAL ASP VAL MET ASP VAL ASN THR GLN LYS SEQRES 10 A 451 GLY ILE GLU MET THR MET ALA GLN TRP THR ARG TYR TYR SEQRES 11 A 451 GLU THR PRO GLU GLU GLU ARG GLU LYS LEU TYR ASN VAL SEQRES 12 A 451 ILE SER LEU GLU PHE SER HIS THR ARG LEU GLU ASN MET SEQRES 13 A 451 VAL GLN ARG PRO SER THR VAL ASP PHE ILE ASP TRP VAL SEQRES 14 A 451 ASP ASN MET TRP PRO ARG HIS LEU LYS GLU SER GLN THR SEQRES 15 A 451 GLU SER THR ASN ALA ILE LEU GLU MET GLN TYR PRO LYS SEQRES 16 A 451 VAL GLN LYS TYR CYS LEU MET SER VAL ARG GLY CYS TYR SEQRES 17 A 451 THR ASP PHE HIS VAL ASP PHE GLY GLY THR SER VAL TRP SEQRES 18 A 451 TYR HIS ILE HIS GLN GLY GLY LYS VAL PHE TRP LEU ILE SEQRES 19 A 451 PRO PRO THR ALA HIS ASN LEU GLU LEU TYR GLU ASN TRP SEQRES 20 A 451 LEU LEU SER GLY SER GLN GLY ASP ILE PHE LEU GLY ASP SEQRES 21 A 451 ARG VAL SER ASP CYS GLN ARG ILE GLU LEU LYS GLN GLY SEQRES 22 A 451 TYR THR PHE VAL ILE PRO SER GLY TRP ILE HIS ALA VAL SEQRES 23 A 451 TYR THR PRO THR ASP THR LEU VAL PHE GLY GLY ASN PHE SEQRES 24 A 451 LEU HIS SER PHE ASN ILE PRO MET GLN LEU LYS ILE TYR SEQRES 25 A 451 ASN ILE GLU ASP ARG THR ARG VAL PRO ASN LYS PHE ARG SEQRES 26 A 451 TYR PRO PHE TYR TYR GLU MET CYS TRP TYR VAL LEU GLU SEQRES 27 A 451 ARG TYR VAL TYR CYS ILE THR ASN ARG SER HIS LEU THR SEQRES 28 A 451 LYS GLU PHE GLN LYS GLU SER LEU SER MET ASP LEU GLU SEQRES 29 A 451 LEU ASN GLY LEU GLU SER GLY ASN GLY ASP GLU GLU ALA SEQRES 30 A 451 VAL ASP ARG GLU PRO ARG GLN VAL HIS LEU THR HIS PHE SEQRES 31 A 451 GLU LEU GLU GLY LEU ARG CYS LEU VAL ASP LYS LEU GLU SEQRES 32 A 451 SER LEU PRO LEU HIS LYS LYS CYS VAL PRO THR GLY ILE SEQRES 33 A 451 GLU ASP GLU ASP ALA LEU ILE ALA ASP VAL LYS ILE LEU SEQRES 34 A 451 LEU GLU GLU LEU ALA ASN SER ASP PRO LYS LEU ALA LEU SEQRES 35 A 451 THR GLY VAL PRO ILE VAL GLN TRP PRO HET FE2 A 600 1 HET AKG A 701 10 HETNAM FE2 FE (II) ION HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 2 FE2 FE 2+ FORMUL 3 AKG C5 H6 O5 FORMUL 4 HOH *74(H2 O) HELIX 1 1 ASP A 39 THR A 46 1 8 HELIX 2 2 GLU A 58 PHE A 62 5 5 HELIX 3 3 ASN A 63 GLY A 71 1 9 HELIX 4 4 THR A 94 VAL A 102 1 9 HELIX 5 5 THR A 122 GLU A 131 1 10 HELIX 6 6 LEU A 153 VAL A 157 5 5 HELIX 7 7 PRO A 160 ASP A 167 1 8 HELIX 8 8 ASP A 167 TRP A 173 1 7 HELIX 9 9 PRO A 174 LYS A 178 5 5 HELIX 10 10 ASP A 214 THR A 218 5 5 HELIX 11 11 THR A 237 SER A 250 1 14 HELIX 12 12 PHE A 257 VAL A 262 1 6 HELIX 13 13 ASN A 304 THR A 318 1 15 HELIX 14 14 PHE A 328 ASN A 346 1 19 HELIX 15 15 THR A 351 LEU A 363 1 13 HELIX 16 16 THR A 454 SER A 470 1 17 HELIX 17 17 LEU A 471 LYS A 476 5 6 HELIX 18 18 ASP A 484 LEU A 499 1 16 HELIX 19 19 ASP A 503 LEU A 508 1 6 SHEET 1 A 8 THR A 55 PHE A 56 0 SHEET 2 A 8 LEU A 76 PHE A 78 1 O ILE A 77 N THR A 55 SHEET 3 A 8 THR A 275 ILE A 278 -1 O VAL A 277 N LEU A 76 SHEET 4 A 8 SER A 219 GLN A 226 -1 N TYR A 222 O PHE A 276 SHEET 5 A 8 THR A 292 PHE A 299 -1 O PHE A 299 N SER A 219 SHEET 6 A 8 TYR A 199 SER A 203 -1 N TYR A 199 O GLY A 296 SHEET 7 A 8 TYR A 141 LEU A 146 -1 N VAL A 143 O MET A 202 SHEET 8 A 8 MET A 111 ASP A 112 -1 N MET A 111 O ASN A 142 SHEET 1 B 4 TYR A 208 HIS A 212 0 SHEET 2 B 4 ILE A 283 TYR A 287 -1 O VAL A 286 N THR A 209 SHEET 3 B 4 LYS A 229 ILE A 234 -1 N VAL A 230 O TYR A 287 SHEET 4 B 4 GLN A 266 LEU A 270 -1 O ILE A 268 N PHE A 231 LINK NE2 HIS A 212 FE FE2 A 600 1555 1555 2.39 LINK OD1 ASP A 214 FE FE2 A 600 1555 1555 2.00 LINK OD2 ASP A 214 FE FE2 A 600 1555 1555 2.79 LINK NE2 HIS A 284 FE FE2 A 600 1555 1555 2.20 LINK FE FE2 A 600 O1 AKG A 701 1555 1555 1.88 LINK FE FE2 A 600 O2 AKG A 701 1555 1555 1.95 LINK FE FE2 A 600 C1 AKG A 701 1555 1555 2.04 SITE 1 AC1 4 HIS A 212 ASP A 214 HIS A 284 AKG A 701 SITE 1 AC2 13 ASN A 142 ILE A 144 THR A 209 HIS A 212 SITE 2 AC2 13 ASP A 214 TYR A 222 LYS A 229 HIS A 284 SITE 3 AC2 13 VAL A 286 FE2 A 600 HOH A 705 HOH A 722 SITE 4 AC2 13 HOH A 754 CRYST1 81.255 81.255 124.010 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012307 0.007105 0.000000 0.00000 SCALE2 0.000000 0.014211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008064 0.00000