PDB Short entry for 2YUH HEADER CHAPERONE 06-APR-07 2YUH TITLE SOLUTION STRUCTURE OF THE C-TERMINAL REGION IN HUMAN TUBULIN FOLDING TITLE 2 COFACTOR C COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUBULIN-SPECIFIC CHAPERONE C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL REGION; COMPND 5 SYNONYM: TUBULIN-FOLDING COFACTOR C, CFC; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TBCC, AB1653_A09; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051025-09; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS MICROTUBULE, BETA-TUBULIN FOLDING, BETA-ROLL, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.SAITO,N.TOCHIO,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 16-MAR-22 2YUH 1 REMARK SEQADV REVDAT 2 24-FEB-09 2YUH 1 VERSN REVDAT 1 15-APR-08 2YUH 0 JRNL AUTH K.SAITO,N.TOCHIO,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE C-TERMINAL REGION IN HUMAN TUBULIN JRNL TITL 2 FOLDING COFACTOR C JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YUH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000027149. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PROTEIN, 20MM D-TRIS-HCL, REMARK 210 100MM NACL, 1MM D-DTT, 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 2006, REMARK 210 NMRVIEW 5, CNS 1.1 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 30 81.29 60.61 REMARK 500 1 ASN A 48 82.30 -169.21 REMARK 500 1 HIS A 58 119.39 -160.41 REMARK 500 1 THR A 69 -79.04 -102.71 REMARK 500 1 SER A 104 -74.26 -99.39 REMARK 500 1 ARG A 137 33.99 -97.97 REMARK 500 1 SER A 138 -70.28 -143.89 REMARK 500 1 ASN A 141 74.98 -105.01 REMARK 500 1 PHE A 148 65.16 -151.18 REMARK 500 1 ASN A 149 83.19 -173.40 REMARK 500 1 LEU A 151 -67.14 -150.00 REMARK 500 1 ARG A 153 -58.88 -176.85 REMARK 500 1 MET A 155 -69.82 -152.84 REMARK 500 1 GLU A 165 41.82 -96.38 REMARK 500 2 SER A 2 -40.20 -176.60 REMARK 500 2 SER A 3 -179.04 60.64 REMARK 500 2 SER A 6 -170.27 60.25 REMARK 500 2 SER A 8 120.14 62.12 REMARK 500 2 VAL A 10 31.01 -98.92 REMARK 500 2 LEU A 28 -71.97 -86.08 REMARK 500 2 HIS A 29 61.32 62.85 REMARK 500 2 GLN A 30 79.34 60.73 REMARK 500 2 ASN A 48 88.42 -160.13 REMARK 500 2 THR A 69 -79.62 -105.57 REMARK 500 2 SER A 104 -71.22 -150.49 REMARK 500 2 TRP A 121 86.76 -152.43 REMARK 500 2 GLU A 125 46.78 -98.92 REMARK 500 2 ARG A 137 31.17 -98.87 REMARK 500 2 LYS A 139 -70.49 -129.52 REMARK 500 2 ASN A 140 89.80 60.21 REMARK 500 2 ASN A 149 31.35 -143.98 REMARK 500 2 ASP A 154 -49.59 -142.78 REMARK 500 2 MET A 155 99.21 -165.51 REMARK 500 2 ALA A 156 132.06 -171.43 REMARK 500 2 ASN A 159 -55.20 -156.46 REMARK 500 2 PRO A 164 -167.68 -73.47 REMARK 500 2 ASP A 173 -56.14 -134.11 REMARK 500 2 SER A 174 102.93 60.43 REMARK 500 3 SER A 6 167.68 58.65 REMARK 500 3 VAL A 10 89.87 63.96 REMARK 500 3 GLN A 30 92.94 60.62 REMARK 500 3 ASN A 48 82.75 -171.27 REMARK 500 3 THR A 69 -80.54 -99.52 REMARK 500 3 SER A 104 -72.37 -95.34 REMARK 500 3 PRO A 118 -174.69 -66.20 REMARK 500 3 GLU A 125 53.25 -104.43 REMARK 500 3 ASN A 140 143.21 -173.09 REMARK 500 3 ARG A 153 -46.57 -162.60 REMARK 500 3 ASP A 154 -47.66 -132.74 REMARK 500 3 ASN A 159 -70.15 -149.05 REMARK 500 REMARK 500 THIS ENTRY HAS 372 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003000423.1 RELATED DB: TARGETDB DBREF 2YUH A 8 173 UNP Q15814 TBCC_HUMAN 181 346 SEQADV 2YUH GLY A 1 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 2 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 3 UNP Q15814 EXPRESSION TAG SEQADV 2YUH GLY A 4 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 5 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 6 UNP Q15814 EXPRESSION TAG SEQADV 2YUH GLY A 7 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 174 UNP Q15814 EXPRESSION TAG SEQADV 2YUH GLY A 175 UNP Q15814 EXPRESSION TAG SEQADV 2YUH PRO A 176 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 177 UNP Q15814 EXPRESSION TAG SEQADV 2YUH SER A 178 UNP Q15814 EXPRESSION TAG SEQADV 2YUH GLY A 179 UNP Q15814 EXPRESSION TAG SEQRES 1 A 179 GLY SER SER GLY SER SER GLY SER TRP VAL CYS GLY PHE SEQRES 2 A 179 SER ASN LEU GLU SER GLN VAL LEU GLU LYS ARG ALA SER SEQRES 3 A 179 GLU LEU HIS GLN ARG ASP VAL LEU LEU THR GLU LEU SER SEQRES 4 A 179 ASN CYS THR VAL ARG LEU TYR GLY ASN PRO ASN THR LEU SEQRES 5 A 179 ARG LEU THR LYS ALA HIS SER CYS LYS LEU LEU CYS GLY SEQRES 6 A 179 PRO VAL SER THR SER VAL PHE LEU GLU ASP CYS SER ASP SEQRES 7 A 179 CYS VAL LEU ALA VAL ALA CYS GLN GLN LEU ARG ILE HIS SEQRES 8 A 179 SER THR LYS ASP THR ARG ILE PHE LEU GLN VAL THR SER SEQRES 9 A 179 ARG ALA ILE VAL GLU ASP CYS SER GLY ILE GLN PHE ALA SEQRES 10 A 179 PRO TYR THR TRP SER TYR PRO GLU ILE ASP LYS ASP PHE SEQRES 11 A 179 GLU SER SER GLY LEU ASP ARG SER LYS ASN ASN TRP ASN SEQRES 12 A 179 ASP VAL ASP ASP PHE ASN TRP LEU ALA ARG ASP MET ALA SEQRES 13 A 179 SER PRO ASN TRP SER ILE LEU PRO GLU GLU GLU ARG ASN SEQRES 14 A 179 ILE GLN TRP ASP SER GLY PRO SER SER GLY HELIX 1 1 ARG A 24 HIS A 29 1 6 HELIX 2 2 ILE A 126 GLY A 134 1 9 SHEET 1 A 7 VAL A 10 GLY A 12 0 SHEET 2 A 7 ASP A 32 LEU A 35 1 O ASP A 32 N CYS A 11 SHEET 3 A 7 LEU A 52 THR A 55 1 O ARG A 53 N LEU A 35 SHEET 4 A 7 VAL A 71 GLU A 74 1 O PHE A 72 N LEU A 54 SHEET 5 A 7 GLN A 87 HIS A 91 1 O ARG A 89 N LEU A 73 SHEET 6 A 7 ARG A 105 GLU A 109 1 O ILE A 107 N LEU A 88 SHEET 7 A 7 VAL A 145 ASP A 146 1 O ASP A 146 N ALA A 106 SHEET 1 B 7 VAL A 20 LYS A 23 0 SHEET 2 B 7 THR A 42 LEU A 45 1 O ARG A 44 N LEU A 21 SHEET 3 B 7 LYS A 61 LEU A 63 1 O LEU A 63 N LEU A 45 SHEET 4 B 7 VAL A 80 ALA A 82 1 O VAL A 80 N LEU A 62 SHEET 5 B 7 ARG A 97 PHE A 99 1 O ARG A 97 N LEU A 81 SHEET 6 B 7 ILE A 114 ALA A 117 1 O ALA A 117 N ILE A 98 SHEET 7 B 7 TRP A 160 SER A 161 1 O SER A 161 N PHE A 116 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000