PDB Short entry for 2YWF HEADER TRANSLATION 20-APR-07 2YWF TITLE CRYSTAL STRUCTURE OF GMPPNP-BOUND LEPA FROM AQUIFEX AEOLICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING PROTEIN LEPA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 STRAIN: VF5; SOURCE 5 GENE: LEPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS G DOMAIN, BETA-BARREL, FERREDOXIN-LIKE DOMAIN, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR M.KAWAZOE,C.TAKEMOTO,T.KAMINISHI,A.NISHINO,R.NAKAYAMA-USHIKOSHI, AUTHOR 2 K.HANAWA-SUETSUGU,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 5 25-OCT-23 2YWF 1 REMARK LINK REVDAT 4 11-OCT-17 2YWF 1 REMARK REVDAT 3 13-JUL-11 2YWF 1 VERSN REVDAT 2 24-FEB-09 2YWF 1 VERSN REVDAT 1 29-APR-08 2YWF 0 JRNL AUTH M.KAWAZOE,C.TAKEMOTO,T.KAMINISHI,A.NISHINO, JRNL AUTH 2 R.NAKAYAMA-USHIKOSHI,K.HANAWA-SUETSUGU,T.TERADA,M.SHIROUZU, JRNL AUTH 3 S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURES OF GTP-BINDING PROTEIN LEPA FROM AQUIFEX JRNL TITL 2 AEOLICUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2701500.150 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 28357 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1456 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.24 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4312 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE : 0.3290 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 249 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4208 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.11000 REMARK 3 B22 (A**2) : -6.66000 REMARK 3 B33 (A**2) : -5.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.790 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 48.29 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : GNP_XPLOR_PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : GNP_XPLOR_TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YWF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000027219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28382 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 45.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.750 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2YWE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 0.1 M MGCL2, 20% W/V REMARK 280 PEG3350, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.66450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.66450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.72550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.07100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.72550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.07100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.66450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.72550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.07100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.66450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.72550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.07100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 34 REMARK 465 GLU A 35 REMARK 465 ARG A 36 REMARK 465 GLU A 37 REMARK 465 LYS A 38 REMARK 465 ARG A 39 REMARK 465 GLU A 40 REMARK 465 GLN A 41 REMARK 465 LEU A 42 REMARK 465 LEU A 43 REMARK 465 ASP A 44 REMARK 465 THR A 45 REMARK 465 LEU A 46 REMARK 465 ASP A 47 REMARK 465 VAL A 48 REMARK 465 GLU A 49 REMARK 465 ARG A 50 REMARK 465 GLU A 51 REMARK 465 ARG A 52 REMARK 465 ALA A 552 REMARK 465 ASN A 553 REMARK 465 VAL A 554 REMARK 465 THR A 555 REMARK 465 ALA A 556 REMARK 465 LYS A 557 REMARK 465 CYS A 558 REMARK 465 TYR A 559 REMARK 465 GLY A 560 REMARK 465 GLY A 561 REMARK 465 ASP A 562 REMARK 465 VAL A 563 REMARK 465 THR A 564 REMARK 465 ARG A 565 REMARK 465 LYS A 566 REMARK 465 LYS A 567 REMARK 465 LYS A 568 REMARK 465 LEU A 569 REMARK 465 LEU A 570 REMARK 465 GLU A 571 REMARK 465 ASN A 572 REMARK 465 GLN A 573 REMARK 465 LYS A 574 REMARK 465 GLU A 575 REMARK 465 GLY A 576 REMARK 465 LYS A 577 REMARK 465 LYS A 578 REMARK 465 ARG A 579 REMARK 465 MET A 580 REMARK 465 LYS A 581 REMARK 465 GLN A 582 REMARK 465 PHE A 583 REMARK 465 GLY A 584 REMARK 465 LYS A 585 REMARK 465 VAL A 586 REMARK 465 GLN A 587 REMARK 465 LEU A 588 REMARK 465 PRO A 589 REMARK 465 GLN A 590 REMARK 465 GLU A 591 REMARK 465 ALA A 592 REMARK 465 PHE A 593 REMARK 465 LEU A 594 REMARK 465 SER A 595 REMARK 465 VAL A 596 REMARK 465 LEU A 597 REMARK 465 LYS A 598 REMARK 465 VAL A 599 REMARK 465 GLU A 600 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 -25.86 -163.16 REMARK 500 ASP A 16 -5.87 84.47 REMARK 500 ALA A 32 71.85 -64.79 REMARK 500 MET A 246 108.57 -56.20 REMARK 500 ALA A 254 124.44 -35.97 REMARK 500 ALA A 262 40.73 -158.30 REMARK 500 GLU A 305 -121.77 58.38 REMARK 500 PHE A 380 -4.76 79.01 REMARK 500 LYS A 429 31.63 -90.20 REMARK 500 ASP A 458 15.84 -157.09 REMARK 500 LYS A 494 7.39 57.28 REMARK 500 LEU A 528 -110.33 -61.73 REMARK 500 PHE A 529 119.93 -23.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 20 OG REMARK 620 2 GNP A 801 O2G 144.6 REMARK 620 3 GNP A 801 O2B 92.6 91.6 REMARK 620 4 HOH A 901 O 84.4 73.5 147.3 REMARK 620 5 HOH A 981 O 110.6 103.9 96.4 115.2 REMARK 620 6 HOH A 993 O 77.4 69.4 76.5 71.0 169.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YWE RELATED DB: PDB REMARK 900 RELATED ID: 2YWG RELATED DB: PDB REMARK 900 RELATED ID: 2YWH RELATED DB: PDB REMARK 900 RELATED ID: AAE001001725.2 RELATED DB: TARGETDB DBREF 2YWF A 1 600 UNP O67618 LEPA_AQUAE 1 600 SEQRES 1 A 600 MET GLU GLN LYS ASN VAL ARG ASN PHE CYS ILE ILE ALA SEQRES 2 A 600 HIS VAL ASP HIS GLY LYS SER THR LEU ALA ASP ARG LEU SEQRES 3 A 600 LEU GLU TYR THR GLY ALA ILE SER GLU ARG GLU LYS ARG SEQRES 4 A 600 GLU GLN LEU LEU ASP THR LEU ASP VAL GLU ARG GLU ARG SEQRES 5 A 600 GLY ILE THR VAL LYS MET GLN ALA VAL ARG MET PHE TYR SEQRES 6 A 600 LYS ALA LYS ASP GLY ASN THR TYR LYS LEU HIS LEU ILE SEQRES 7 A 600 ASP THR PRO GLY HIS VAL ASP PHE SER TYR GLU VAL SER SEQRES 8 A 600 ARG ALA LEU ALA ALA CYS GLU GLY ALA LEU LEU LEU ILE SEQRES 9 A 600 ASP ALA SER GLN GLY ILE GLU ALA GLN THR VAL ALA ASN SEQRES 10 A 600 PHE TRP LYS ALA VAL GLU GLN ASP LEU VAL ILE ILE PRO SEQRES 11 A 600 VAL ILE ASN LYS ILE ASP LEU PRO SER ALA ASP VAL ASP SEQRES 12 A 600 ARG VAL LYS LYS GLN ILE GLU GLU VAL LEU GLY LEU ASP SEQRES 13 A 600 PRO GLU GLU ALA ILE LEU ALA SER ALA LYS GLU GLY ILE SEQRES 14 A 600 GLY ILE GLU GLU ILE LEU GLU ALA ILE VAL ASN ARG ILE SEQRES 15 A 600 PRO PRO PRO LYS GLY ASP PRO GLN LYS PRO LEU LYS ALA SEQRES 16 A 600 LEU ILE PHE ASP SER TYR TYR ASP PRO TYR ARG GLY ALA SEQRES 17 A 600 VAL ALA PHE VAL ARG ILE PHE ASP GLY GLU VAL LYS PRO SEQRES 18 A 600 GLY ASP LYS ILE MET LEU MET SER THR GLY LYS GLU TYR SEQRES 19 A 600 GLU VAL THR GLU VAL GLY ALA GLN THR PRO LYS MET THR SEQRES 20 A 600 LYS PHE ASP LYS LEU SER ALA GLY ASP VAL GLY TYR ILE SEQRES 21 A 600 ALA ALA SER ILE LYS ASP VAL ARG ASP ILE ARG ILE GLY SEQRES 22 A 600 ASP THR ILE THR HIS ALA LYS ASN PRO THR LYS GLU PRO SEQRES 23 A 600 VAL PRO GLY PHE GLN PRO ALA LYS PRO MET VAL TYR ALA SEQRES 24 A 600 GLY ILE TYR PRO ALA GLU ASP THR THR TYR GLU GLU LEU SEQRES 25 A 600 ARG ASP ALA LEU GLU LYS TYR ALA ILE ASN ASP ALA ALA SEQRES 26 A 600 ILE VAL TYR GLU PRO GLU SER SER PRO ALA LEU GLY MET SEQRES 27 A 600 GLY PHE ARG VAL GLY PHE LEU GLY LEU LEU HIS MET GLU SEQRES 28 A 600 ILE VAL GLN GLU ARG LEU GLU ARG GLU TYR GLY VAL LYS SEQRES 29 A 600 ILE ILE THR THR ALA PRO ASN VAL ILE TYR ARG VAL LYS SEQRES 30 A 600 LYS LYS PHE THR ASP GLU VAL ILE GLU VAL ARG ASN PRO SEQRES 31 A 600 MET ASP PHE PRO ASP ASN ALA GLY LEU ILE GLU TYR VAL SEQRES 32 A 600 GLU GLU PRO PHE VAL LEU VAL THR ILE ILE THR PRO LYS SEQRES 33 A 600 GLU TYR VAL GLY PRO ILE ILE GLN LEU CYS GLN GLU LYS SEQRES 34 A 600 ARG GLY ILE GLN LYS ASN MET THR TYR LEU ASP PRO ASN SEQRES 35 A 600 THR VAL TYR LEU GLU TYR GLU MET PRO LEU SER GLU ILE SEQRES 36 A 600 ILE VAL ASP PHE HIS ASP LYS ILE LYS SER ILE SER ARG SEQRES 37 A 600 GLY PHE ALA SER TYR ASP TYR GLU PHE ILE GLY TYR ARG SEQRES 38 A 600 PRO SER ASP LEU ILE LYS LEU THR VAL LEU ILE ASN LYS SEQRES 39 A 600 LYS PRO VAL ASP ALA LEU SER PHE ILE VAL HIS ALA ASP SEQRES 40 A 600 ARG ALA GLN LYS PHE ALA ARG ARG VAL ALA GLU LYS LEU SEQRES 41 A 600 ARG GLU THR ILE PRO ARG GLN LEU PHE GLU VAL HIS ILE SEQRES 42 A 600 GLN VAL ALA LYS GLY GLY LYS VAL ILE ALA SER GLU ARG SEQRES 43 A 600 ILE LYS PRO LEU ARG ALA ASN VAL THR ALA LYS CYS TYR SEQRES 44 A 600 GLY GLY ASP VAL THR ARG LYS LYS LYS LEU LEU GLU ASN SEQRES 45 A 600 GLN LYS GLU GLY LYS LYS ARG MET LYS GLN PHE GLY LYS SEQRES 46 A 600 VAL GLN LEU PRO GLN GLU ALA PHE LEU SER VAL LEU LYS SEQRES 47 A 600 VAL GLU HET MG A 701 1 HET GNP A 801 32 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER FORMUL 2 MG MG 2+ FORMUL 3 GNP C10 H17 N6 O13 P3 FORMUL 4 HOH *197(H2 O) HELIX 1 1 GLU A 2 LYS A 4 5 3 HELIX 2 2 GLY A 18 GLY A 31 1 14 HELIX 3 3 HIS A 83 ASP A 85 5 3 HELIX 4 4 PHE A 86 ALA A 96 1 11 HELIX 5 5 GLU A 111 GLN A 124 1 14 HELIX 6 6 ASP A 141 VAL A 152 1 12 HELIX 7 7 ASP A 156 ALA A 160 5 5 HELIX 8 8 GLY A 170 ILE A 182 1 13 HELIX 9 9 ASP A 266 ILE A 270 5 5 HELIX 10 10 THR A 308 ILE A 321 1 14 HELIX 11 11 GLY A 346 TYR A 361 1 16 HELIX 12 12 ASN A 389 PHE A 393 5 5 HELIX 13 13 ASN A 396 GLY A 398 5 3 HELIX 14 14 TYR A 418 LYS A 429 1 12 HELIX 15 15 LEU A 452 SER A 467 1 16 HELIX 16 16 ASP A 498 SER A 501 5 4 HELIX 17 17 ARG A 508 ILE A 524 1 17 SHEET 1 A 6 VAL A 61 LYS A 66 0 SHEET 2 A 6 THR A 72 ILE A 78 -1 O LEU A 75 N MET A 63 SHEET 3 A 6 VAL A 6 ALA A 13 1 N ARG A 7 O HIS A 76 SHEET 4 A 6 GLY A 99 ASP A 105 1 O LEU A 101 N CYS A 10 SHEET 5 A 6 VAL A 127 ASN A 133 1 O VAL A 131 N LEU A 102 SHEET 6 A 6 ILE A 161 LEU A 162 1 O ILE A 161 N ILE A 132 SHEET 1 B 8 GLU A 233 GLU A 235 0 SHEET 2 B 8 LYS A 224 LEU A 227 -1 N ILE A 225 O TYR A 234 SHEET 3 B 8 THR A 275 HIS A 278 -1 O THR A 277 N MET A 226 SHEET 4 B 8 LYS A 194 ASP A 203 -1 N ALA A 195 O ILE A 276 SHEET 5 B 8 GLY A 207 ASP A 216 -1 O GLY A 207 N ASP A 203 SHEET 6 B 8 VAL A 257 ALA A 261 -1 O GLY A 258 N VAL A 212 SHEET 7 B 8 GLU A 238 GLN A 242 -1 N GLU A 238 O ALA A 261 SHEET 8 B 8 MET A 246 PHE A 249 -1 O PHE A 249 N VAL A 239 SHEET 1 C 2 GLU A 218 VAL A 219 0 SHEET 2 C 2 LEU A 252 SER A 253 -1 O LEU A 252 N VAL A 219 SHEET 1 D 4 VAL A 327 SER A 333 0 SHEET 2 D 4 GLY A 337 PHE A 344 -1 O GLY A 339 N GLU A 331 SHEET 3 D 4 VAL A 297 PRO A 303 -1 N VAL A 297 O PHE A 344 SHEET 4 D 4 ILE A 365 THR A 367 -1 O ILE A 366 N TYR A 302 SHEET 1 E 4 VAL A 327 SER A 333 0 SHEET 2 E 4 GLY A 337 PHE A 344 -1 O GLY A 339 N GLU A 331 SHEET 3 E 4 VAL A 297 PRO A 303 -1 N VAL A 297 O PHE A 344 SHEET 4 E 4 ASN A 371 VAL A 372 -1 O ASN A 371 N TYR A 298 SHEET 1 F 5 ILE A 385 VAL A 387 0 SHEET 2 F 5 TYR A 374 LYS A 378 -1 N TYR A 374 O VAL A 387 SHEET 3 F 5 ILE A 400 PRO A 415 -1 O GLU A 401 N LYS A 377 SHEET 4 F 5 THR A 443 PRO A 451 -1 O TYR A 448 N VAL A 410 SHEET 5 F 5 ILE A 432 ASP A 440 -1 N THR A 437 O TYR A 445 SHEET 1 G 4 ILE A 385 VAL A 387 0 SHEET 2 G 4 TYR A 374 LYS A 378 -1 N TYR A 374 O VAL A 387 SHEET 3 G 4 ILE A 400 PRO A 415 -1 O GLU A 401 N LYS A 377 SHEET 4 G 4 SER A 472 PRO A 482 -1 O ASP A 474 N THR A 411 SHEET 1 H 3 LYS A 495 PRO A 496 0 SHEET 2 H 3 LEU A 485 ILE A 492 -1 N ILE A 492 O LYS A 495 SHEET 3 H 3 PHE A 502 HIS A 505 -1 O PHE A 502 N LEU A 488 SHEET 1 I 4 LYS A 495 PRO A 496 0 SHEET 2 I 4 LEU A 485 ILE A 492 -1 N ILE A 492 O LYS A 495 SHEET 3 I 4 VAL A 531 LYS A 537 -1 O GLN A 534 N LEU A 491 SHEET 4 I 4 LYS A 540 ILE A 547 -1 O GLU A 545 N ILE A 533 LINK OG SER A 20 MG MG A 701 1555 1555 2.00 LINK MG MG A 701 O2G GNP A 801 1555 1555 1.99 LINK MG MG A 701 O2B GNP A 801 1555 1555 2.20 LINK MG MG A 701 O HOH A 901 1555 1555 2.32 LINK MG MG A 701 O HOH A 981 1555 1555 1.94 LINK MG MG A 701 O HOH A 993 1555 1555 2.48 CISPEP 1 THR A 243 PRO A 244 0 0.21 SITE 1 AC1 4 SER A 20 HOH A 901 HOH A 981 HOH A 993 SITE 1 AC2 18 ASP A 16 HIS A 17 GLY A 18 LYS A 19 SITE 2 AC2 18 SER A 20 THR A 21 ASN A 133 LYS A 134 SITE 3 AC2 18 ASP A 136 LEU A 137 SER A 164 ALA A 165 SITE 4 AC2 18 LYS A 166 HOH A 848 HOH A 901 HOH A 902 SITE 5 AC2 18 HOH A 981 HOH A 993 CRYST1 81.451 116.142 123.329 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008108 0.00000