PDB Short entry for 2Z5S HEADER CELL CYCLE 17-JUL-07 2Z5S TITLE MOLECULAR BASIS FOR THE INHIBITION OF P53 BY MDMX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MDM4 PROTEIN; COMPND 3 CHAIN: M, N, O; COMPND 4 FRAGMENT: SWIB DOMAIN; COMPND 5 SYNONYM: ZEBRAFISH MDMX; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CELLULAR TUMOR ANTIGEN P53; COMPND 9 CHAIN: P, Q, R; COMPND 10 FRAGMENT: TRANSACTIVATION DOMAIN; COMPND 11 SYNONYM: TUMOR SUPPRESSOR P53, PHOSPHOPROTEIN P53, ANTIGEN NY-CO-13; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: MDM4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-46; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: RP HPLC PURIFIED KEYWDS MDMX, MDM4, P53, ACETYLATION, ACTIVATOR, ANTI-ONCOGENE, APOPTOSIS, KEYWDS 2 CELL CYCLE, CYTOPLASM, DISEASE MUTATION, DNA-BINDING, ENDOPLASMIC KEYWDS 3 RETICULUM, NUCLEUS, PHOSPHORYLATION, POLYMORPHISM, TRANSCRIPTION KEYWDS 4 REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR G.M.POPOWICZ,A.CZARNA,U.ROTHWEILER,A.SZWAGIERCZAK,T.A.HOLAK REVDAT 4 01-NOV-23 2Z5S 1 REMARK REVDAT 3 06-NOV-19 2Z5S 1 JRNL SEQADV REVDAT 2 24-FEB-09 2Z5S 1 VERSN REVDAT 1 06-NOV-07 2Z5S 0 JRNL AUTH G.M.POPOWICZ,A.CZARNA,U.ROTHWEILER,A.SZWAGIERCZAK, JRNL AUTH 2 M.KRAJEWSKI,L.WEBER,T.A.HOLAK JRNL TITL MOLECULAR BASIS FOR THE INHIBITION OF P53 BY MDMX. JRNL REF CELL CYCLE V. 6 2386 2007 JRNL REFN ESSN 1551-4005 JRNL PMID 17938582 JRNL DOI 10.4161/CC.6.19.4740 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1121 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1498 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2377 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 147 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.23000 REMARK 3 B33 (A**2) : 0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.283 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.254 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.520 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.888 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.808 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2436 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3296 ; 1.426 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 289 ; 8.761 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;38.475 ;24.717 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 442 ;18.608 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;31.971 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 375 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1785 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1166 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1630 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 121 ; 0.202 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.204 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.232 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1516 ; 0.601 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2395 ; 1.047 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1028 ; 1.354 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 901 ; 2.192 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Z5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000027556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21546 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1T4F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 300, 0.1M MES PH6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 15.22000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 910 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 860 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: N, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 980 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET M 488 REMARK 465 ALA M 489 REMARK 465 HIS M 490 REMARK 465 HIS M 491 REMARK 465 HIS M 492 REMARK 465 HIS M 493 REMARK 465 HIS M 494 REMARK 465 HIS M 495 REMARK 465 ASP M 496 REMARK 465 ASP M 497 REMARK 465 ASP M 498 REMARK 465 ASP M 499 REMARK 465 PRO M 18 REMARK 465 GLY M 19 REMARK 465 ASN M 107 REMARK 465 ASN M 108 REMARK 465 SER M 109 REMARK 465 ASP M 110 REMARK 465 ALA M 111 REMARK 465 ALA M 112 REMARK 465 LYS M 113 REMARK 465 ASN M 114 REMARK 465 LEU M 115 REMARK 465 SER M 116 REMARK 465 VAL M 117 REMARK 465 GLY M 118 REMARK 465 LYS M 119 REMARK 465 ASP M 120 REMARK 465 SER M 121 REMARK 465 ASN M 122 REMARK 465 GLU M 123 REMARK 465 SER M 124 REMARK 465 PRO M 125 REMARK 465 SER M 126 REMARK 465 GLU M 127 REMARK 465 ASP M 128 REMARK 465 PRO M 129 REMARK 465 GLY M 130 REMARK 465 GLN M 131 REMARK 465 VAL M 132 REMARK 465 SER M 133 REMARK 465 SER M 134 REMARK 465 GLY M 135 REMARK 465 SER M 136 REMARK 465 ILE M 137 REMARK 465 ASN M 138 REMARK 465 SER M 139 REMARK 465 ALA M 140 REMARK 465 SER P 15 REMARK 465 GLN P 16 REMARK 465 GLU P 28 REMARK 465 ASN P 29 REMARK 465 MET N 1 REMARK 465 ALA N 2 REMARK 465 HIS N 3 REMARK 465 HIS N 4 REMARK 465 HIS N 5 REMARK 465 HIS N 6 REMARK 465 HIS N 7 REMARK 465 HIS N 8 REMARK 465 ASP N 9 REMARK 465 ASP N 10 REMARK 465 ASP N 11 REMARK 465 ASP N 12 REMARK 465 LYS N 13 REMARK 465 ILE N 14 REMARK 465 ARG N 15 REMARK 465 THR N 16 REMARK 465 LEU N 17 REMARK 465 PRO N 18 REMARK 465 GLY N 19 REMARK 465 GLU N 20 REMARK 465 GLY N 21 REMARK 465 ASN N 108 REMARK 465 SER N 109 REMARK 465 ASP N 110 REMARK 465 ALA N 111 REMARK 465 ALA N 112 REMARK 465 LYS N 113 REMARK 465 ASN N 114 REMARK 465 LEU N 115 REMARK 465 SER N 116 REMARK 465 VAL N 117 REMARK 465 GLY N 118 REMARK 465 LYS N 119 REMARK 465 ASP N 120 REMARK 465 SER N 121 REMARK 465 ASN N 122 REMARK 465 GLU N 123 REMARK 465 SER N 124 REMARK 465 PRO N 125 REMARK 465 SER N 126 REMARK 465 GLU N 127 REMARK 465 ASP N 128 REMARK 465 PRO N 129 REMARK 465 GLY N 130 REMARK 465 GLN N 131 REMARK 465 VAL N 132 REMARK 465 SER N 133 REMARK 465 SER N 134 REMARK 465 GLY N 135 REMARK 465 SER N 136 REMARK 465 ILE N 137 REMARK 465 ASN N 138 REMARK 465 SER N 139 REMARK 465 ALA N 140 REMARK 465 SER Q 15 REMARK 465 GLN Q 16 REMARK 465 GLU Q 28 REMARK 465 ASN Q 29 REMARK 465 MET O 1 REMARK 465 ALA O 2 REMARK 465 HIS O 3 REMARK 465 HIS O 4 REMARK 465 HIS O 5 REMARK 465 HIS O 6 REMARK 465 HIS O 7 REMARK 465 HIS O 8 REMARK 465 ASP O 9 REMARK 465 ASP O 10 REMARK 465 ASP O 11 REMARK 465 ASP O 12 REMARK 465 LYS O 13 REMARK 465 ILE O 14 REMARK 465 ARG O 15 REMARK 465 THR O 16 REMARK 465 LEU O 17 REMARK 465 PRO O 18 REMARK 465 GLY O 19 REMARK 465 GLU O 20 REMARK 465 ASN O 107 REMARK 465 ASN O 108 REMARK 465 SER O 109 REMARK 465 ASP O 110 REMARK 465 ALA O 111 REMARK 465 ALA O 112 REMARK 465 LYS O 113 REMARK 465 ASN O 114 REMARK 465 LEU O 115 REMARK 465 SER O 116 REMARK 465 VAL O 117 REMARK 465 GLY O 118 REMARK 465 LYS O 119 REMARK 465 ASP O 120 REMARK 465 SER O 121 REMARK 465 ASN O 122 REMARK 465 GLU O 123 REMARK 465 SER O 124 REMARK 465 PRO O 125 REMARK 465 SER O 126 REMARK 465 GLU O 127 REMARK 465 ASP O 128 REMARK 465 PRO O 129 REMARK 465 GLY O 130 REMARK 465 GLN O 131 REMARK 465 VAL O 132 REMARK 465 SER O 133 REMARK 465 SER O 134 REMARK 465 GLY O 135 REMARK 465 SER O 136 REMARK 465 ILE O 137 REMARK 465 ASN O 138 REMARK 465 SER O 139 REMARK 465 ALA O 140 REMARK 465 SER R 15 REMARK 465 GLN R 16 REMARK 465 GLU R 17 REMARK 465 GLU R 28 REMARK 465 ASN R 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS M 500 CE NZ REMARK 470 ILE M 501 CG1 CG2 CD1 REMARK 470 ARG M 15 NE CZ NH1 NH2 REMARK 470 ILE M 105 CD1 REMARK 470 GLU P 17 CD OE1 OE2 REMARK 470 LYS N 90 CG CD CE NZ REMARK 470 ASN N 107 OD1 ND2 REMARK 470 ARG O 27 CD NE CZ NH1 NH2 REMARK 470 GLU O 41 CG CD OE1 OE2 REMARK 470 LYS O 60 CE NZ REMARK 470 LYS O 65 CD CE NZ REMARK 470 ILE O 105 CG1 CG2 CD1 REMARK 470 LEU O 106 CD1 CD2 REMARK 470 LYS R 24 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU M 53 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 LEU O 53 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG M 67 77.17 -119.44 REMARK 500 ASP M 75 60.67 -111.79 REMARK 500 LEU P 25 47.51 -94.16 REMARK 500 GLU N 41 157.74 -36.40 REMARK 500 LEU N 106 -62.47 -100.06 REMARK 500 ARG O 67 78.00 -153.88 REMARK 500 ILE O 105 32.29 -88.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CR8 RELATED DB: PDB REMARK 900 OTHER DOMAIN OF THE SAME PROTEIN REMARK 900 RELATED ID: 1YCR RELATED DB: PDB REMARK 900 RELATED PROTEIN REMARK 900 RELATED ID: 2Z5T RELATED DB: PDB REMARK 900 ZEBRAFISH MDMX WITH L46V AND V95L MUTATIONS DBREF 2Z5S M 15 140 UNP Q4V944 Q4V944_DANRE 15 140 DBREF 2Z5S P 15 29 UNP P04637 P53_HUMAN 15 29 DBREF 2Z5S N 15 140 UNP Q4V944 Q4V944_DANRE 15 140 DBREF 2Z5S Q 15 29 UNP P04637 P53_HUMAN 15 29 DBREF 2Z5S O 15 140 UNP Q4V944 Q4V944_DANRE 15 140 DBREF 2Z5S R 15 29 UNP P04637 P53_HUMAN 15 29 SEQADV 2Z5S MET M 488 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ALA M 489 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS M 490 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS M 491 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS M 492 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS M 493 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS M 494 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS M 495 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP M 496 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP M 497 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP M 498 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP M 499 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S LYS M 500 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ILE M 501 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S MET N 1 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ALA N 2 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS N 3 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS N 4 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS N 5 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS N 6 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS N 7 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS N 8 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP N 9 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP N 10 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP N 11 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP N 12 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S LYS N 13 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ILE N 14 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S MET O 1 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ALA O 2 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS O 3 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS O 4 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS O 5 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS O 6 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS O 7 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S HIS O 8 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP O 9 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP O 10 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP O 11 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ASP O 12 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S LYS O 13 UNP Q4V944 EXPRESSION TAG SEQADV 2Z5S ILE O 14 UNP Q4V944 EXPRESSION TAG SEQRES 1 M 140 MET ALA HIS HIS HIS HIS HIS HIS ASP ASP ASP ASP LYS SEQRES 2 M 140 ILE ARG THR LEU PRO GLY GLU GLY THR GLN VAL HIS PRO SEQRES 3 M 140 ARG ALA PRO LEU LEU GLN ILE LEU LYS VAL ALA GLY ALA SEQRES 4 M 140 GLN GLU GLU VAL PHE THR LEU LYS GLU VAL MET HIS TYR SEQRES 5 M 140 LEU GLY GLN TYR ILE MET MET LYS GLN LEU TYR ASP LYS SEQRES 6 M 140 GLN ARG GLN HIS ILE VAL HIS CYS HIS ASP ASP PRO LEU SEQRES 7 M 140 GLY GLU LEU LEU GLU VAL GLY SER PHE SER VAL LYS ASN SEQRES 8 M 140 PRO SER PRO VAL TYR GLU MET LEU LYS ARG ASN LEU VAL SEQRES 9 M 140 ILE LEU ASN ASN SER ASP ALA ALA LYS ASN LEU SER VAL SEQRES 10 M 140 GLY LYS ASP SER ASN GLU SER PRO SER GLU ASP PRO GLY SEQRES 11 M 140 GLN VAL SER SER GLY SER ILE ASN SER ALA SEQRES 1 P 15 SER GLN GLU THR PHE SER ASP LEU TRP LYS LEU LEU PRO SEQRES 2 P 15 GLU ASN SEQRES 1 N 140 MET ALA HIS HIS HIS HIS HIS HIS ASP ASP ASP ASP LYS SEQRES 2 N 140 ILE ARG THR LEU PRO GLY GLU GLY THR GLN VAL HIS PRO SEQRES 3 N 140 ARG ALA PRO LEU LEU GLN ILE LEU LYS VAL ALA GLY ALA SEQRES 4 N 140 GLN GLU GLU VAL PHE THR LEU LYS GLU VAL MET HIS TYR SEQRES 5 N 140 LEU GLY GLN TYR ILE MET MET LYS GLN LEU TYR ASP LYS SEQRES 6 N 140 GLN ARG GLN HIS ILE VAL HIS CYS HIS ASP ASP PRO LEU SEQRES 7 N 140 GLY GLU LEU LEU GLU VAL GLY SER PHE SER VAL LYS ASN SEQRES 8 N 140 PRO SER PRO VAL TYR GLU MET LEU LYS ARG ASN LEU VAL SEQRES 9 N 140 ILE LEU ASN ASN SER ASP ALA ALA LYS ASN LEU SER VAL SEQRES 10 N 140 GLY LYS ASP SER ASN GLU SER PRO SER GLU ASP PRO GLY SEQRES 11 N 140 GLN VAL SER SER GLY SER ILE ASN SER ALA SEQRES 1 Q 15 SER GLN GLU THR PHE SER ASP LEU TRP LYS LEU LEU PRO SEQRES 2 Q 15 GLU ASN SEQRES 1 O 140 MET ALA HIS HIS HIS HIS HIS HIS ASP ASP ASP ASP LYS SEQRES 2 O 140 ILE ARG THR LEU PRO GLY GLU GLY THR GLN VAL HIS PRO SEQRES 3 O 140 ARG ALA PRO LEU LEU GLN ILE LEU LYS VAL ALA GLY ALA SEQRES 4 O 140 GLN GLU GLU VAL PHE THR LEU LYS GLU VAL MET HIS TYR SEQRES 5 O 140 LEU GLY GLN TYR ILE MET MET LYS GLN LEU TYR ASP LYS SEQRES 6 O 140 GLN ARG GLN HIS ILE VAL HIS CYS HIS ASP ASP PRO LEU SEQRES 7 O 140 GLY GLU LEU LEU GLU VAL GLY SER PHE SER VAL LYS ASN SEQRES 8 O 140 PRO SER PRO VAL TYR GLU MET LEU LYS ARG ASN LEU VAL SEQRES 9 O 140 ILE LEU ASN ASN SER ASP ALA ALA LYS ASN LEU SER VAL SEQRES 10 O 140 GLY LYS ASP SER ASN GLU SER PRO SER GLU ASP PRO GLY SEQRES 11 O 140 GLN VAL SER SER GLY SER ILE ASN SER ALA SEQRES 1 R 15 SER GLN GLU THR PHE SER ASP LEU TRP LYS LEU LEU PRO SEQRES 2 R 15 GLU ASN FORMUL 7 HOH *147(H2 O) HELIX 1 1 ARG M 27 ALA M 37 1 11 HELIX 2 2 THR M 45 GLN M 61 1 17 HELIX 3 3 ASP M 76 GLU M 83 1 8 HELIX 4 4 PRO M 92 ASN M 102 1 11 HELIX 5 5 THR P 18 LYS P 24 1 7 HELIX 6 6 ARG N 27 ALA N 37 1 11 HELIX 7 7 LEU N 46 LYS N 60 1 15 HELIX 8 8 ASP N 76 GLU N 83 1 8 HELIX 9 9 PRO N 92 ASN N 102 1 11 HELIX 10 10 THR Q 18 LEU Q 25 1 8 HELIX 11 11 ARG O 27 ALA O 37 1 11 HELIX 12 12 LEU O 46 GLN O 61 1 16 HELIX 13 13 ASP O 76 GLU O 83 1 8 HELIX 14 14 PRO O 92 ASN O 102 1 11 HELIX 15 15 THR R 18 LYS R 24 1 7 SHEET 1 A 2 HIS M 25 PRO M 26 0 SHEET 2 A 2 LEU M 103 VAL M 104 -1 O VAL M 104 N HIS M 25 SHEET 1 B 2 ILE M 70 HIS M 72 0 SHEET 2 B 2 SER M 86 SER M 88 -1 O PHE M 87 N VAL M 71 SHEET 1 C 3 PHE N 44 THR N 45 0 SHEET 2 C 3 GLN N 23 PRO N 26 -1 N VAL N 24 O PHE N 44 SHEET 3 C 3 LEU N 103 ILE N 105 -1 O VAL N 104 N HIS N 25 SHEET 1 D 2 ILE N 70 HIS N 72 0 SHEET 2 D 2 SER N 86 SER N 88 -1 O PHE N 87 N VAL N 71 SHEET 1 E 3 PHE O 44 THR O 45 0 SHEET 2 E 3 GLN O 23 PRO O 26 -1 N VAL O 24 O PHE O 44 SHEET 3 E 3 LEU O 103 VAL O 104 -1 O VAL O 104 N HIS O 25 SHEET 1 F 2 ILE O 70 HIS O 72 0 SHEET 2 F 2 SER O 86 SER O 88 -1 O PHE O 87 N VAL O 71 CRYST1 80.520 30.440 100.850 90.00 102.47 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012419 0.000000 0.002746 0.00000 SCALE2 0.000000 0.032852 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010155 0.00000