PDB Short entry for 3A01
HEADER    GENE REGULATION/DNA                     28-FEB-09   3A01              
TITLE     CRYSTAL STRUCTURE OF ARISTALESS AND CLAWLESS HOMEODOMAINS BOUND TO DNA
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HOMEODOMAIN-CONTAINING PROTEIN;                            
COMPND   3 CHAIN: A, E;                                                         
COMPND   4 FRAGMENT: CLAWLESS HOMEOBOX, RESIDUES 170-261;                       
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: HOMEOBOX PROTEIN ARISTALESS;                               
COMPND   8 CHAIN: B, F;                                                         
COMPND   9 FRAGMENT: HOMEOBOX, RESIDUES 80-146;                                 
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: 5'-D(*GP*GP*CP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*GP*CP*GP*G)-  
COMPND  13 3';                                                                  
COMPND  14 CHAIN: C, G;                                                         
COMPND  15 ENGINEERED: YES;                                                     
COMPND  16 MOL_ID: 4;                                                           
COMPND  17 MOLECULE: 5'-D(*CP*CP*GP*CP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*GP*CP*C)-  
COMPND  18 3';                                                                  
COMPND  19 CHAIN: D, H;                                                         
COMPND  20 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;                        
SOURCE   3 ORGANISM_COMMON: FRUIT FLY;                                          
SOURCE   4 ORGANISM_TAXID: 7227;                                                
SOURCE   5 GENE: C15, CG7937;                                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;                        
SOURCE  10 ORGANISM_COMMON: FRUIT FLY;                                          
SOURCE  11 ORGANISM_TAXID: 7227;                                                
SOURCE  12 GENE: AL, CG3935;                                                    
SOURCE  13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  14 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  15 MOL_ID: 3;                                                           
SOURCE  16 SYNTHETIC: YES;                                                      
SOURCE  17 MOL_ID: 4;                                                           
SOURCE  18 SYNTHETIC: YES                                                       
KEYWDS    HOMEODOMAIN, PROTEIN-DNA COMPLEX, DNA-BINDING, HOMEOBOX, NUCLEUS,     
KEYWDS   2 DEVELOPMENTAL PROTEIN, GENE REGULATION-DNA COMPLEX                   
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    K.MIYAZONO,K.NAGATA,K.SAIGO,T.KOJIMA,M.TANOKURA                       
REVDAT   3   19-MAY-10 3A01    1       JRNL                                     
REVDAT   2   28-APR-10 3A01    1       JRNL                                     
REVDAT   1   09-MAR-10 3A01    0                                                
JRNL        AUTH   K.MIYAZONO,Y.ZHI,Y.TAKAMURA,K.NAGATA,K.SAIGO,T.KOJIMA,       
JRNL        AUTH 2 M.TANOKURA                                                   
JRNL        TITL   COOPERATIVE DNA-BINDING AND SEQUENCE-RECOGNITION MECHANISM   
JRNL        TITL 2 OF ARISTALESS AND CLAWLESS                                   
JRNL        REF    EMBO J.                       V.  29  1613 2010              
JRNL        REFN                   ISSN 0261-4189                               
JRNL        PMID   20389279                                                     
JRNL        DOI    10.1038/EMBOJ.2010.53                                        
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.70 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 19.65                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 100.0                          
REMARK   3   NUMBER OF REFLECTIONS             : 17051                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.234                           
REMARK   3   R VALUE            (WORKING SET) : 0.228                           
REMARK   3   FREE R VALUE                     : 0.283                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 10.200                          
REMARK   3   FREE R VALUE TEST SET COUNT      : 1943                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.70                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.77                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 1242                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 100.00                       
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3540                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 121                          
REMARK   3   BIN FREE R VALUE                    : 0.4080                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2286                                    
REMARK   3   NUCLEIC ACID ATOMS       : 1382                                    
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 0                                       
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.793         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.367         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.279         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL          
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.936                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.904                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3884 ; 0.011 ; 0.021       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  5508 ; 1.769 ; 2.389       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   259 ; 5.990 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   131 ;33.494 ;20.840       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   452 ;21.424 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    41 ;16.837 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):  NULL ;  NULL ;  NULL       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2491 ; 0.005 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  1540 ; 0.220 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  2488 ; 0.309 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   133 ; 0.181 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    38 ; 0.151 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):     3 ; 0.172 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3A01 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-MAR-09.                  
REMARK 100 THE RCSB ID CODE IS RCSB028640.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : PHOTON FACTORY                     
REMARK 200  BEAMLINE                       : AR-NW12A                           
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.000                              
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 210                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XSCALE                             
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 18995                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.700                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : NULL                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: PDB ENTRIES 3A02, 3A03, AND 1PUF                     
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 56.06                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL                                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       35.46500            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       55.34000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       42.70000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       55.34000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       35.46500            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       42.70000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 6760 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 13040 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, B                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 6190 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 12620 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, G, H, F                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   169                                                      
REMARK 465     ARG A   248                                                      
REMARK 465     GLU A   249                                                      
REMARK 465     ALA A   250                                                      
REMARK 465     GLU A   251                                                      
REMARK 465     ARG A   252                                                      
REMARK 465     GLN A   253                                                      
REMARK 465     ALA A   254                                                      
REMARK 465     ALA A   255                                                      
REMARK 465     ASN A   256                                                      
REMARK 465     ARG A   257                                                      
REMARK 465     LEU A   258                                                      
REMARK 465     MET A   259                                                      
REMARK 465     LEU A   260                                                      
REMARK 465     SER A   261                                                      
REMARK 465     ALA B    80                                                      
REMARK 465     PRO B    81                                                      
REMARK 465     LYS B    82                                                      
REMARK 465     ARG B    83                                                      
REMARK 465     LYS B    84                                                      
REMARK 465     GLN B    85                                                      
REMARK 465     GLN B   143                                                      
REMARK 465     GLU B   144                                                      
REMARK 465     LYS B   145                                                      
REMARK 465     VAL B   146                                                      
REMARK 465     MET E   169                                                      
REMARK 465     ALA E   170                                                      
REMARK 465     ARG E   171                                                      
REMARK 465     ARG E   172                                                      
REMARK 465     ILE E   173                                                      
REMARK 465     GLY E   174                                                      
REMARK 465     LYS E   184                                                      
REMARK 465     ARG E   185                                                      
REMARK 465     LYS E   186                                                      
REMARK 465     LYS E   187                                                      
REMARK 465     PRO E   188                                                      
REMARK 465     ARG E   248                                                      
REMARK 465     GLU E   249                                                      
REMARK 465     ALA E   250                                                      
REMARK 465     GLU E   251                                                      
REMARK 465     ARG E   252                                                      
REMARK 465     GLN E   253                                                      
REMARK 465     ALA E   254                                                      
REMARK 465     ALA E   255                                                      
REMARK 465     ASN E   256                                                      
REMARK 465     ARG E   257                                                      
REMARK 465     LEU E   258                                                      
REMARK 465     MET E   259                                                      
REMARK 465     LEU E   260                                                      
REMARK 465     SER E   261                                                      
REMARK 465     ALA F    80                                                      
REMARK 465     PRO F    81                                                      
REMARK 465     LYS F    82                                                      
REMARK 465     ARG F    83                                                      
REMARK 465     LYS F    84                                                      
REMARK 465     GLN F    85                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NH2  ARG F    89     O2    DT G     5              2.15            
REMARK 500   OE2  GLU E   201     NH1  ARG E   236              2.15            
REMARK 500   NH1  ARG E   215     OP1   DC H     2              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DA C   6   O3'    DA C   6   C3'    -0.051                       
REMARK 500     DG C  14   O3'    DG C  14   C3'    -0.050                       
REMARK 500     DA D   9   O3'    DA D   9   C3'    -0.043                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DG C   1   O4' -  C4' -  C3' ANGL. DEV. =  -2.8 DEGREES          
REMARK 500     DT C   5   C3' -  C2' -  C1' ANGL. DEV. =  -5.1 DEGREES          
REMARK 500     DT C   5   O4' -  C1' -  N1  ANGL. DEV. =   3.7 DEGREES          
REMARK 500     DA C   6   O4' -  C1' -  N9  ANGL. DEV. =  -7.4 DEGREES          
REMARK 500     DA C  10   O4' -  C1' -  N9  ANGL. DEV. =  -4.5 DEGREES          
REMARK 500     DA C  10   C3' -  O3' -  P   ANGL. DEV. =   9.2 DEGREES          
REMARK 500     DT C  13   O4' -  C1' -  N1  ANGL. DEV. =  -5.6 DEGREES          
REMARK 500     DG C  14   O4' -  C1' -  N9  ANGL. DEV. =   6.2 DEGREES          
REMARK 500     DG C  17   O4' -  C1' -  N9  ANGL. DEV. =   3.2 DEGREES          
REMARK 500     DG D   3   O4' -  C1' -  N9  ANGL. DEV. =  -5.1 DEGREES          
REMARK 500     DA D   6   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DT D   7   O5' -  P   -  OP1 ANGL. DEV. =   8.7 DEGREES          
REMARK 500     DT D   7   O4' -  C4' -  C3' ANGL. DEV. =  -4.9 DEGREES          
REMARK 500     DT D   7   C5' -  C4' -  O4' ANGL. DEV. =  10.7 DEGREES          
REMARK 500     DT D   7   C1' -  O4' -  C4' ANGL. DEV. =  -7.8 DEGREES          
REMARK 500     DT D   7   C4' -  C3' -  C2' ANGL. DEV. =  -9.7 DEGREES          
REMARK 500     DT D   7   O4' -  C1' -  N1  ANGL. DEV. =   3.5 DEGREES          
REMARK 500     DT D   8   O4' -  C1' -  N1  ANGL. DEV. =   2.1 DEGREES          
REMARK 500     DA D   9   O5' -  C5' -  C4' ANGL. DEV. =  -6.9 DEGREES          
REMARK 500     DA D   9   O4' -  C1' -  N9  ANGL. DEV. =  -5.2 DEGREES          
REMARK 500     DA D  10   O4' -  C1' -  N9  ANGL. DEV. =   3.9 DEGREES          
REMARK 500     DT D  11   C5' -  C4' -  O4' ANGL. DEV. =   7.4 DEGREES          
REMARK 500     DT D  11   C1' -  O4' -  C4' ANGL. DEV. =  -8.1 DEGREES          
REMARK 500     DT D  11   O4' -  C1' -  N1  ANGL. DEV. =   3.7 DEGREES          
REMARK 500     DT D  11   C4  -  C5  -  C7  ANGL. DEV. =   4.7 DEGREES          
REMARK 500     DT D  12   O4' -  C1' -  N1  ANGL. DEV. =  -5.9 DEGREES          
REMARK 500     DA D  13   C3' -  C2' -  C1' ANGL. DEV. =  -4.9 DEGREES          
REMARK 500     DA D  14   O4' -  C1' -  N9  ANGL. DEV. =  -6.6 DEGREES          
REMARK 500     DG D  15   C3' -  C2' -  C1' ANGL. DEV. =  -6.3 DEGREES          
REMARK 500     DG D  15   O4' -  C1' -  N9  ANGL. DEV. =   3.5 DEGREES          
REMARK 500     DC D  17   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500     DT G   5   O4' -  C1' -  N1  ANGL. DEV. =   4.0 DEGREES          
REMARK 500     DT G   5   C4  -  C5  -  C7  ANGL. DEV. =   3.9 DEGREES          
REMARK 500     DT G   5   C6  -  C5  -  C7  ANGL. DEV. =  -3.8 DEGREES          
REMARK 500     DA G   6   O4' -  C1' -  N9  ANGL. DEV. =  -5.5 DEGREES          
REMARK 500     DT G   8   N3  -  C2  -  O2  ANGL. DEV. =  -3.6 DEGREES          
REMARK 500     DA G  11   O4' -  C4' -  C3' ANGL. DEV. =  -5.1 DEGREES          
REMARK 500     DA G  11   O4' -  C1' -  N9  ANGL. DEV. =   3.3 DEGREES          
REMARK 500     DG G  14   O4' -  C1' -  N9  ANGL. DEV. =   2.9 DEGREES          
REMARK 500     DC G  15   O4' -  C1' -  N1  ANGL. DEV. =   2.8 DEGREES          
REMARK 500     DG G  16   O4' -  C1' -  N9  ANGL. DEV. =   3.4 DEGREES          
REMARK 500     DC H   1   O4' -  C1' -  N1  ANGL. DEV. =   4.9 DEGREES          
REMARK 500     DT H   7   O4' -  C4' -  C3' ANGL. DEV. =  -5.6 DEGREES          
REMARK 500     DT H   7   C1' -  O4' -  C4' ANGL. DEV. = -10.2 DEGREES          
REMARK 500     DT H   7   C4' -  C3' -  C2' ANGL. DEV. =  -8.1 DEGREES          
REMARK 500     DT H   7   O4' -  C1' -  N1  ANGL. DEV. =   5.5 DEGREES          
REMARK 500     DA H   9   O5' -  C5' -  C4' ANGL. DEV. =  -6.6 DEGREES          
REMARK 500     DA H  10   C1' -  O4' -  C4' ANGL. DEV. =  -7.0 DEGREES          
REMARK 500     DA H  10   O4' -  C1' -  C2' ANGL. DEV. =  -5.2 DEGREES          
REMARK 500     DA H  10   O4' -  C1' -  N9  ANGL. DEV. =   6.8 DEGREES          
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      57 ANGLE DEVIATIONS.                             
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A 171      -36.01   -154.07                                   
REMARK 500    ARG A 172       59.29     37.51                                   
REMARK 500    LYS A 187      -55.96   -164.26                                   
REMARK 500    THR A 244      -81.25    -39.41                                   
REMARK 500    ARG B 106      -74.37    -67.37                                   
REMARK 500    GLN E 207      102.49   -164.28                                   
REMARK 500    TYR F 109       66.05   -116.22                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 LYS A  187     PRO A  188                 -142.41                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3A02   RELATED DB: PDB                                   
REMARK 900 ARISTALESS HOMEODOMAIN                                               
REMARK 900 RELATED ID: 3A03   RELATED DB: PDB                                   
REMARK 900 HOX11L1 HOMEODOMAIN                                                  
DBREF  3A01 A  170   261  UNP    Q9VD99   Q9VD99_DROME   170    261             
DBREF  3A01 B   80   146  UNP    Q06453   AL_DROME        80    146             
DBREF  3A01 E  170   261  UNP    Q9VD99   Q9VD99_DROME   170    261             
DBREF  3A01 F   80   146  UNP    Q06453   AL_DROME        80    146             
DBREF  3A01 C    1    17  PDB    3A01     3A01             1     17             
DBREF  3A01 G    1    17  PDB    3A01     3A01             1     17             
DBREF  3A01 D    1    17  PDB    3A01     3A01             1     17             
DBREF  3A01 H    1    17  PDB    3A01     3A01             1     17             
SEQADV 3A01 MET A  169  UNP  Q9VD99              INITIATING METHIONINE          
SEQADV 3A01 MET E  169  UNP  Q9VD99              INITIATING METHIONINE          
SEQRES   1 A   93  MET ALA ARG ARG ILE GLY HIS PRO TYR GLN ASN ARG THR          
SEQRES   2 A   93  PRO PRO LYS ARG LYS LYS PRO ARG THR SER PHE THR ARG          
SEQRES   3 A   93  ILE GLN VAL ALA GLU LEU GLU LYS ARG PHE HIS LYS GLN          
SEQRES   4 A   93  LYS TYR LEU ALA SER ALA GLU ARG ALA ALA LEU ALA ARG          
SEQRES   5 A   93  GLY LEU LYS MET THR ASP ALA GLN VAL LYS THR TRP PHE          
SEQRES   6 A   93  GLN ASN ARG ARG THR LYS TRP ARG ARG GLN THR ALA GLU          
SEQRES   7 A   93  GLU ARG GLU ALA GLU ARG GLN ALA ALA ASN ARG LEU MET          
SEQRES   8 A   93  LEU SER                                                      
SEQRES   1 B   67  ALA PRO LYS ARG LYS GLN ARG ARG TYR ARG THR THR PHE          
SEQRES   2 B   67  THR SER PHE GLN LEU GLU GLU LEU GLU LYS ALA PHE SER          
SEQRES   3 B   67  ARG THR HIS TYR PRO ASP VAL PHE THR ARG GLU GLU LEU          
SEQRES   4 B   67  ALA MET LYS ILE GLY LEU THR GLU ALA ARG ILE GLN VAL          
SEQRES   5 B   67  TRP PHE GLN ASN ARG ARG ALA LYS TRP ARG LYS GLN GLU          
SEQRES   6 B   67  LYS VAL                                                      
SEQRES   1 C   17   DG  DG  DC  DT  DT  DA  DA  DT  DT  DA  DA  DT  DT          
SEQRES   2 C   17   DG  DC  DG  DG                                              
SEQRES   1 D   17   DC  DC  DG  DC  DA  DA  DT  DT  DA  DA  DT  DT  DA          
SEQRES   2 D   17   DA  DG  DC  DC                                              
SEQRES   1 E   93  MET ALA ARG ARG ILE GLY HIS PRO TYR GLN ASN ARG THR          
SEQRES   2 E   93  PRO PRO LYS ARG LYS LYS PRO ARG THR SER PHE THR ARG          
SEQRES   3 E   93  ILE GLN VAL ALA GLU LEU GLU LYS ARG PHE HIS LYS GLN          
SEQRES   4 E   93  LYS TYR LEU ALA SER ALA GLU ARG ALA ALA LEU ALA ARG          
SEQRES   5 E   93  GLY LEU LYS MET THR ASP ALA GLN VAL LYS THR TRP PHE          
SEQRES   6 E   93  GLN ASN ARG ARG THR LYS TRP ARG ARG GLN THR ALA GLU          
SEQRES   7 E   93  GLU ARG GLU ALA GLU ARG GLN ALA ALA ASN ARG LEU MET          
SEQRES   8 E   93  LEU SER                                                      
SEQRES   1 F   67  ALA PRO LYS ARG LYS GLN ARG ARG TYR ARG THR THR PHE          
SEQRES   2 F   67  THR SER PHE GLN LEU GLU GLU LEU GLU LYS ALA PHE SER          
SEQRES   3 F   67  ARG THR HIS TYR PRO ASP VAL PHE THR ARG GLU GLU LEU          
SEQRES   4 F   67  ALA MET LYS ILE GLY LEU THR GLU ALA ARG ILE GLN VAL          
SEQRES   5 F   67  TRP PHE GLN ASN ARG ARG ALA LYS TRP ARG LYS GLN GLU          
SEQRES   6 F   67  LYS VAL                                                      
SEQRES   1 G   17   DG  DG  DC  DT  DT  DA  DA  DT  DT  DA  DA  DT  DT          
SEQRES   2 G   17   DG  DC  DG  DG                                              
SEQRES   1 H   17   DC  DC  DG  DC  DA  DA  DT  DT  DA  DA  DT  DT  DA          
SEQRES   2 H   17   DA  DG  DC  DC                                              
HELIX    1   1 THR A  193  GLN A  207  1                                  15    
HELIX    2   2 ALA A  211  GLY A  221  1                                  11    
HELIX    3   3 THR A  225  ALA A  245  1                                  21    
HELIX    4   4 THR B   93  THR B  107  1                                  15    
HELIX    5   5 ASP B  111  GLY B  123  1                                  13    
HELIX    6   6 THR B  125  LYS B  142  1                                  18    
HELIX    7   7 PRO E  176  ARG E  180  5                                   5    
HELIX    8   8 THR E  193  GLN E  207  1                                  15    
HELIX    9   9 ALA E  211  LEU E  222  1                                  12    
HELIX   10  10 THR E  225  ALA E  245  1                                  21    
HELIX   11  11 THR F   93  THR F  107  1                                  15    
HELIX   12  12 ASP F  111  GLY F  123  1                                  13    
HELIX   13  13 THR F  125  GLU F  144  1                                  20    
CISPEP   1 LYS A  186    LYS A  187          0       -15.21                     
CISPEP   2 ARG E  189    THR E  190          0         3.83                     
CRYST1   70.930   85.400  110.680  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014098  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.011710  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.009035        0.00000