PDB Short entry for 3A1B
HEADER    TRANSFERASE                             28-MAR-09   3A1B              
TITLE     CRYSTAL STRUCTURE OF THE DNMT3A ADD DOMAIN IN COMPLEX WITH HISTONE H3 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3A, HISTONE H3.1;       
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: ADD(ATRX-DNMT3-DNMT3L) DOMAIN(RESIDUES 476-614), UNP       
COMPND   5 RESIDUES 2-21(HISTONE H3.1);                                         
COMPND   6 SYNONYM: DNMT3A, DNA METHYLTRANSFERASE HSAIIIA, DNA MTASE HSAIIIA,   
COMPND   7 M.HSAIIIA, H3/A, H3/B, H3/C, H3/D, H3/F, H3/H, H3/I, H3/J, H3/K,     
COMPND   8 H3/L;                                                                
COMPND   9 EC: 2.1.1.37;                                                        
COMPND  10 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PGEX                                      
KEYWDS    ZINC-FINGER, HISTONE BINDING, CHROMOSOMAL PROTEIN, DNA DAMAGE, DNA    
KEYWDS   2 REPAIR, DNA-BINDING, METHYLATION, NUCLEOSOME CORE, NUCLEUS,          
KEYWDS   3 PHOSPHOPROTEIN, ALTERNATIVE PROMOTER USAGE, METAL-BINDING,           
KEYWDS   4 METHYLTRANSFERASE, S-ADENOSYL-L-METHIONINE, TRANSFERASE              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.OTANI,K.ARITA,M.ARIYOSHI,M.SHIRAKAWA                                
REVDAT   3   09-AUG-17 3A1B    1       SOURCE REMARK                            
REVDAT   2   13-JUL-11 3A1B    1       VERSN                                    
REVDAT   1   10-NOV-09 3A1B    0                                                
JRNL        AUTH   J.OTANI,T.NANKUMO,K.ARITA,S.INAMOTO,M.ARIYOSHI,M.SHIRAKAWA   
JRNL        TITL   STRUCTURAL BASIS FOR RECOGNITION OF H3K4 METHYLATION STATUS  
JRNL        TITL 2 BY THE DNA METHYLTRANSFERASE 3A ATRX-DNMT3-DNMT3L DOMAIN     
JRNL        REF    EMBO REP.                     V.  10  1235 2009              
JRNL        REFN                   ISSN 1469-221X                               
JRNL        PMID   19834512                                                     
JRNL        DOI    10.1038/EMBOR.2009.218                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.29 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 32.72                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 11534                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.193                           
REMARK   3   R VALUE            (WORKING SET) : 0.192                           
REMARK   3   FREE R VALUE                     : 0.224                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.800                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 576                             
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.29                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.35                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 695                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 82.90                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2320                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 32                           
REMARK   3   BIN FREE R VALUE                    : 0.2630                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1173                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 31                                      
REMARK   3   SOLVENT ATOMS            : 38                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   B VALUE TYPE : LIKELY RESIDUAL                                     
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 43.69                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 2.16000                                              
REMARK   3    B22 (A**2) : 2.16000                                              
REMARK   3    B33 (A**2) : -4.33000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.196         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.173         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.111         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.047         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.958                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.938                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  1219 ; 0.013 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  1627 ; 1.501 ; 1.961       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   150 ; 4.854 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):    61 ;33.229 ;23.443       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   212 ;16.946 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    12 ;17.577 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   168 ; 0.101 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):   927 ; 0.005 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):   555 ; 0.207 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):   815 ; 0.304 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):    62 ; 0.145 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    34 ; 0.205 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):     8 ; 0.173 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):   761 ; 0.797 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  1177 ; 1.277 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   523 ; 2.282 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   448 ; 3.570 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 3                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   456        A   472                          
REMARK   3    ORIGIN FOR THE GROUP (A):  34.0369  -7.2752  11.6380              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2326 T22:   0.3778                                     
REMARK   3      T33:   0.0742 T12:   0.1587                                     
REMARK   3      T13:   0.2666 T23:  -0.0053                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:  14.2058 L22:  15.1387                                     
REMARK   3      L33:   5.0194 L12:  -3.4410                                     
REMARK   3      L13:  -1.0867 L23:  -8.1400                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.7017 S12:   0.1273 S13:  -1.8014                       
REMARK   3      S21:  -0.6157 S22:  -1.0545 S23:  -0.9225                       
REMARK   3      S31:   1.3654 S32:   0.5934 S33:   0.3528                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   473        A   543                          
REMARK   3    ORIGIN FOR THE GROUP (A):  21.0966   0.9313  13.6057              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.0650 T22:   0.1246                                     
REMARK   3      T33:   0.0677 T12:   0.0302                                     
REMARK   3      T13:   0.0089 T23:   0.0220                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.9657 L22:   5.4161                                     
REMARK   3      L33:   7.3528 L12:  -1.7626                                     
REMARK   3      L13:   2.5345 L23:  -4.7795                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0322 S12:  -0.2025 S13:  -0.1149                       
REMARK   3      S21:  -0.1092 S22:   0.0666 S23:   0.0596                       
REMARK   3      S31:   0.2174 S32:  -0.3244 S33:  -0.0344                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   544        A   610                          
REMARK   3    ORIGIN FOR THE GROUP (A):  31.3545   5.3412  17.7805              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1528 T22:   0.2145                                     
REMARK   3      T33:   0.1827 T12:   0.0030                                     
REMARK   3      T13:  -0.1075 T23:   0.0970                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   4.2940 L22:   7.3807                                     
REMARK   3      L33:  10.8445 L12:  -0.4647                                     
REMARK   3      L13:  -1.5597 L23:  -2.5319                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.2171 S12:  -0.2279 S13:   0.3439                       
REMARK   3      S21:   0.2288 S22:  -0.1787 S23:  -0.8617                       
REMARK   3      S31:  -0.6085 S32:   1.0876 S33:   0.3957                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3A1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-APR-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000028686.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-JUN-08                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : PHOTON FACTORY                     
REMARK 200  BEAMLINE                       : BL-5A                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 12159                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.292                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 32.721                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 1.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.3                               
REMARK 200  DATA REDUNDANCY                : 24.10                              
REMARK 200  R MERGE                    (I) : 0.08200                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 15.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.38                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 86.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 15.50                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.42800                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3A1A                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 65.58                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 2000 MONOMETHYL ETHER, 0.1M      
REMARK 280  BIS-TRIS, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2                        
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y+1/2,X+1/2,Z+1/4                                      
REMARK 290       4555   Y+1/2,-X+1/2,Z+3/4                                      
REMARK 290       5555   -X+1/2,Y+1/2,-Z+1/4                                     
REMARK 290       6555   X+1/2,-Y+1/2,-Z+3/4                                     
REMARK 290       7555   Y,X,-Z                                                  
REMARK 290       8555   -Y,-X,-Z+1/2                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       54.97500            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000       34.27350            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000       34.27350            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       27.48750            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000       34.27350            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000       34.27350            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       82.46250            
REMARK 290   SMTRY1   5 -1.000000  0.000000  0.000000       34.27350            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       34.27350            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000       27.48750            
REMARK 290   SMTRY1   6  1.000000  0.000000  0.000000       34.27350            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       34.27350            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000       82.46250            
REMARK 290   SMTRY1   7  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000       54.97500            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     SER A   465                                                      
REMARK 465     THR A   466                                                      
REMARK 465     GLY A   467                                                      
REMARK 465     GLY A   468                                                      
REMARK 465     LYS A   469                                                      
REMARK 465     ALA A   470                                                      
REMARK 465     PRO A   471                                                      
REMARK 465     ASN A   611                                                      
REMARK 465     ASN A   612                                                      
REMARK 465     HIS A   613                                                      
REMARK 465     ASP A   614                                                      
REMARK 480                                                                      
REMARK 480 ZERO OCCUPANCY ATOM                                                  
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO                  
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS                
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;              
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):         
REMARK 480   M RES C SSEQI ATOMS                                                
REMARK 480     ARG A  463   CG   CD   NE   CZ   NH1  NH2                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    ARG A 463   CB    ARG A 463   CG     -0.223                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    LEU A 504   CA  -  CB  -  CG  ANGL. DEV. =  15.4 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A   1  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 494   SG                                                     
REMARK 620 2 CYS A 497   SG  113.8                                              
REMARK 620 3 CYS A 514   SG  113.1 112.2                                        
REMARK 620 4 CYS A 517   SG  107.3 106.7 102.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A   2  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 537   SG                                                     
REMARK 620 2 CYS A 540   SG  106.8                                              
REMARK 620 3 CYS A 559   SG  111.4 109.9                                        
REMARK 620 4 CYS A 562   SG  114.1 108.6 105.9                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A   3  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 549   SG                                                     
REMARK 620 2 CYS A 554   SG  109.8                                              
REMARK 620 3 CYS A 583   SG  112.4 107.5                                        
REMARK 620 4 CYS A 586   SG  107.3 100.7 118.4                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 3                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 615                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 616                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 617                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 4                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 5                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 6                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: BC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 7                   
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3A1A   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN IN THE FREE STATE                                   
DBREF  3A1B A  456   475  UNP    P68431   H31_HUMAN        2     21             
DBREF  3A1B A  476   614  UNP    Q9Y6K1   DNM3A_HUMAN    476    614             
SEQRES   1 A  159  ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY          
SEQRES   2 A  159  LYS ALA PRO ARG LYS GLN LEU ARG GLU ARG LEU VAL TYR          
SEQRES   3 A  159  GLU VAL ARG GLN LYS CYS ARG ASN ILE GLU ASP ILE CYS          
SEQRES   4 A  159  ILE SER CYS GLY SER LEU ASN VAL THR LEU GLU HIS PRO          
SEQRES   5 A  159  LEU PHE VAL GLY GLY MET CYS GLN ASN CYS LYS ASN CYS          
SEQRES   6 A  159  PHE LEU GLU CYS ALA TYR GLN TYR ASP ASP ASP GLY TYR          
SEQRES   7 A  159  GLN SER TYR CYS THR ILE CYS CYS GLY GLY ARG GLU VAL          
SEQRES   8 A  159  LEU MET CYS GLY ASN ASN ASN CYS CYS ARG CYS PHE CYS          
SEQRES   9 A  159  VAL GLU CYS VAL ASP LEU LEU VAL GLY PRO GLY ALA ALA          
SEQRES  10 A  159  GLN ALA ALA ILE LYS GLU ASP PRO TRP ASN CYS TYR MET          
SEQRES  11 A  159  CYS GLY HIS LYS GLY THR TYR GLY LEU LEU ARG ARG ARG          
SEQRES  12 A  159  GLU ASP TRP PRO SER ARG LEU GLN MET PHE PHE ALA ASN          
SEQRES  13 A  159  ASN HIS ASP                                                  
HET     ZN  A   1       1                                                       
HET     ZN  A   2       1                                                       
HET     ZN  A   3       1                                                       
HET    EDO  A 615       4                                                       
HET    EDO  A 616       4                                                       
HET    EDO  A 617       4                                                       
HET    EDO  A   4       4                                                       
HET    EDO  A   5       4                                                       
HET    EDO  A   6       4                                                       
HET    EDO  A   7       4                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   2   ZN    3(ZN 2+)                                                     
FORMUL   5  EDO    7(C2 H6 O2)                                                  
FORMUL  12  HOH   *38(H2 O)                                                     
HELIX    1   1 ARG A  472  GLN A  485  1                                  14    
HELIX    2   2 ASN A  489  ILE A  493  5                                   5    
HELIX    3   3 CYS A  514  ALA A  525  1                                  12    
HELIX    4   4 VAL A  560  VAL A  567  1                                   8    
HELIX    5   5 GLY A  570  LYS A  577  1                                   8    
HELIX    6   6 ASP A  600  ALA A  610  1                                  11    
SHEET    1   A 3 ARG A 457  GLN A 460  0                                        
SHEET    2   A 3 GLU A 545  MET A 548 -1  O  MET A 548   N  ARG A 457           
SHEET    3   A 3 CYS A 557  CYS A 559 -1  O  PHE A 558   N  LEU A 547           
SHEET    1   B 2 LEU A 504  GLU A 505  0                                        
SHEET    2   B 2 GLY A 512  MET A 513 -1  O  MET A 513   N  LEU A 504           
SHEET    1   C 2 THR A 591  TYR A 592  0                                        
SHEET    2   C 2 LEU A 595  ARG A 596 -1  O  LEU A 595   N  TYR A 592           
LINK         SG  CYS A 494                ZN    ZN A   1     1555   1555  2.27  
LINK         SG  CYS A 497                ZN    ZN A   1     1555   1555  2.30  
LINK         SG  CYS A 514                ZN    ZN A   1     1555   1555  2.31  
LINK         SG  CYS A 517                ZN    ZN A   1     1555   1555  2.38  
LINK         SG  CYS A 537                ZN    ZN A   2     1555   1555  2.40  
LINK         SG  CYS A 540                ZN    ZN A   2     1555   1555  2.34  
LINK         SG  CYS A 549                ZN    ZN A   3     1555   1555  2.15  
LINK         SG  CYS A 554                ZN    ZN A   3     1555   1555  2.35  
LINK         SG  CYS A 559                ZN    ZN A   2     1555   1555  2.34  
LINK         SG  CYS A 562                ZN    ZN A   2     1555   1555  2.37  
LINK         SG  CYS A 583                ZN    ZN A   3     1555   1555  2.38  
LINK         SG  CYS A 586                ZN    ZN A   3     1555   1555  2.21  
CISPEP   1 ASP A  579    PRO A  580          0        -2.35                     
SITE     1 AC1  4 CYS A 494  CYS A 497  CYS A 514  CYS A 517                    
SITE     1 AC2  4 CYS A 537  CYS A 540  CYS A 559  CYS A 562                    
SITE     1 AC3  4 CYS A 549  CYS A 554  CYS A 583  CYS A 586                    
SITE     1 AC4  8 EDO A   7  HOH A   9  PHE A 521  CYS A 524                    
SITE     2 AC4  8 GLN A 534  TYR A 536  CYS A 537  ARG A 556                    
SITE     1 AC5  6 GLU A 491  LEU A 504  GLU A 505  GLY A 511                    
SITE     2 AC5  6 GLY A 512  ARG A 598                                          
SITE     1 AC6  6 GLU A 477  ALA A 525  TYR A 526  TYR A 528                    
SITE     2 AC6  6 ASP A 564  PRO A 569                                          
SITE     1 AC7  3 TRP A 581  ASN A 582  TYR A 592                               
SITE     1 AC8  6 HOH A  21  ARG A 478  TYR A 481  GLU A 523                    
SITE     2 AC8  6 TYR A 526  GLN A 527                                          
SITE     1 AC9  6 GLY A 543  ARG A 544  GLU A 545  CYS A 559                    
SITE     2 AC9  6 VAL A 560  GLU A 561                                          
SITE     1 BC1  7 PHE A 521  ALA A 525  GLN A 534  ARG A 556                    
SITE     2 BC1  7 PRO A 569  LEU A 605  EDO A 615                               
CRYST1   68.547   68.547  109.950  90.00  90.00  90.00 P 41 21 2     8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014589  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.014589  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.009095        0.00000