PDB Short entry for 3ACH HEADER HYDROLASE 04-JAN-10 3ACH TITLE CRYSTAL STRUCTURE OF CARBOHYDRATE-BINDING MODULE FAMILY 28 FROM TITLE 2 CLOSTRIDIUM JOSUI CEL5A IN COMPLEX WITH CELLOTETRAOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-1,4-ENDOGLUCANASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 560-752; COMPND 5 SYNONYM: CARBOHYDRATE-BINDING MODULE FAMILY 28; COMPND 6 EC: 3.2.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM JOSUI; SOURCE 3 ORGANISM_TAXID: 1499; SOURCE 4 GENE: CELA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS BETA-JELLYROLL, CELLULOSE-BINDING DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TSUKIMOTO,R.TAKADA,Y.ARAKI,K.SUZUKI,S.KARITA,T.WAKAGI,H.SHOUN, AUTHOR 2 T.WATANABE,S.FUSHINOBU REVDAT 4 29-JUL-20 3ACH 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 11-OCT-17 3ACH 1 REMARK REVDAT 2 30-OCT-13 3ACH 1 JRNL VERSN REVDAT 1 02-MAR-10 3ACH 0 JRNL AUTH K.TSUKIMOTO,R.TAKADA,Y.ARAKI,K.SUZUKI,S.KARITA,T.WAKAGI, JRNL AUTH 2 H.SHOUN,T.WATANABE,S.FUSHINOBU JRNL TITL RECOGNITION OF CELLOOLIGOSACCHARIDES BY A FAMILY 28 JRNL TITL 2 CARBOHYDRATE-BINDING MODULE. JRNL REF FEBS LETT. V. 584 1205 2010 JRNL REFN ISSN 0014-5793 JRNL PMID 20159017 JRNL DOI 10.1016/J.FEBSLET.2010.02.027 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 35516 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1782 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2530 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1491 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 356 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.894 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1578 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2156 ; 2.354 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 192 ; 7.717 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 63 ;37.568 ;24.762 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 248 ;11.170 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;19.264 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 256 ; 0.153 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1152 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 962 ; 1.393 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1556 ; 2.227 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 616 ; 3.161 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 600 ; 4.776 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 3ACH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000029082. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35569 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 38.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1UWW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, KH2PO4, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.78800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.80950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.80950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.78800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 215 O HOH A 221 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 230 O HOH A 341 3555 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 83 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 135 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 151 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 161 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 161 CB - CG - OD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ASP A 186 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 186 CB - CG - OD2 ANGL. DEV. = -8.4 DEGREES REMARK 500 TYR A 196 CZ - CE2 - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 198 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 201 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 201 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 110 109.61 -164.88 REMARK 500 SER A 111 -17.92 -147.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 37 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 31 O REMARK 620 2 GLU A 33 OE2 84.7 REMARK 620 3 SER A 60 OG 153.3 69.2 REMARK 620 4 LYS A 61 O 84.3 96.4 103.8 REMARK 620 5 ASP A 198 OD1 78.9 163.6 126.9 82.8 REMARK 620 6 ASP A 198 OD2 130.1 143.1 76.5 78.5 52.9 REMARK 620 7 HOH A 366 O 94.2 92.5 81.5 170.9 88.1 95.7 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ACF RELATED DB: PDB REMARK 900 RELATED ID: 3ACG RELATED DB: PDB REMARK 900 RELATED ID: 3ACI RELATED DB: PDB DBREF 3ACH A 11 203 UNP Q59290 Q59290_CLOJO 560 752 SEQADV 3ACH MET A 1 UNP Q59290 EXPRESSION TAG SEQADV 3ACH ARG A 2 UNP Q59290 EXPRESSION TAG SEQADV 3ACH GLY A 3 UNP Q59290 EXPRESSION TAG SEQADV 3ACH SER A 4 UNP Q59290 EXPRESSION TAG SEQADV 3ACH HIS A 5 UNP Q59290 EXPRESSION TAG SEQADV 3ACH HIS A 6 UNP Q59290 EXPRESSION TAG SEQADV 3ACH HIS A 7 UNP Q59290 EXPRESSION TAG SEQADV 3ACH HIS A 8 UNP Q59290 EXPRESSION TAG SEQADV 3ACH HIS A 9 UNP Q59290 EXPRESSION TAG SEQADV 3ACH HIS A 10 UNP Q59290 EXPRESSION TAG SEQRES 1 A 203 MET ARG GLY SER HIS HIS HIS HIS HIS HIS ARG ALA VAL SEQRES 2 A 203 VAL GLU ALA PRO VAL GLU HIS ALA PRO ILE GLY LYS ALA SEQRES 3 A 203 THR LEU PRO SER THR PHE GLU ASP SER THR ARG GLN GLY SEQRES 4 A 203 TRP ALA TRP ASP ALA THR SER GLY VAL GLN SER ALA LEU SEQRES 5 A 203 THR ILE LYS ASP ALA ASN GLU SER LYS ALA ILE SER TRP SEQRES 6 A 203 GLU VAL LYS TYR PRO GLU VAL LYS PRO VAL ASP GLY TRP SEQRES 7 A 203 ALA SER ALA PRO ARG ILE MET LEU GLY ASN VAL ASN THR SEQRES 8 A 203 THR ARG GLY ASN ASN LYS TYR LEU THR PHE ASP PHE TYR SEQRES 9 A 203 LEU LYS PRO THR GLN ALA SER LYS GLY SER LEU THR ILE SEQRES 10 A 203 SER LEU ALA PHE ALA PRO PRO SER LEU GLY PHE TRP ALA SEQRES 11 A 203 GLN ALA THR GLY ASP VAL ASN ILE PRO LEU SER SER LEU SEQRES 12 A 203 SER LYS MET LYS LYS THR THR ASP GLY LEU TYR HIS PHE SEQRES 13 A 203 GLN VAL LYS TYR ASP LEU ASP LYS ILE ASN ASP GLY LYS SEQRES 14 A 203 VAL LEU THR ALA ASN THR VAL LEU ARG ASP ILE THR ILE SEQRES 15 A 203 VAL VAL ALA ASP GLY ASN SER ASP PHE ALA GLY THR MET SEQRES 16 A 203 TYR LEU ASP ASN ILE ARG PHE GLU HET BGC B 1 12 HET BGC B 2 11 HET BGC B 3 11 HET BGC B 4 11 HET CA A 204 1 HET PO4 A 205 5 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 2 BGC 4(C6 H12 O6) FORMUL 3 CA CA 2+ FORMUL 4 PO4 O4 P 3- FORMUL 5 HOH *356(H2 O) HELIX 1 1 PRO A 123 GLY A 127 5 5 HELIX 2 2 SER A 141 MET A 146 5 6 HELIX 3 3 ILE A 165 LYS A 169 5 5 SHEET 1 A 5 TRP A 40 TRP A 42 0 SHEET 2 A 5 ARG A 83 LEU A 86 -1 O MET A 85 N ALA A 41 SHEET 3 A 5 ASP A 179 GLY A 187 -1 O ILE A 180 N LEU A 86 SHEET 4 A 5 SER A 114 ALA A 122 -1 N SER A 114 O GLY A 187 SHEET 5 A 5 ALA A 130 GLN A 131 -1 O ALA A 130 N PHE A 121 SHEET 1 B 5 TRP A 40 TRP A 42 0 SHEET 2 B 5 ARG A 83 LEU A 86 -1 O MET A 85 N ALA A 41 SHEET 3 B 5 ASP A 179 GLY A 187 -1 O ILE A 180 N LEU A 86 SHEET 4 B 5 SER A 114 ALA A 122 -1 N SER A 114 O GLY A 187 SHEET 5 B 5 VAL A 136 PRO A 139 -1 O VAL A 136 N ILE A 117 SHEET 1 C 5 THR A 53 ALA A 57 0 SHEET 2 C 5 SER A 60 LYS A 68 -1 O SER A 60 N ALA A 57 SHEET 3 C 5 ALA A 192 GLU A 203 -1 O MET A 195 N TRP A 65 SHEET 4 C 5 TYR A 98 GLN A 109 -1 N THR A 100 O ARG A 201 SHEET 5 C 5 TYR A 154 ASP A 161 -1 O PHE A 156 N PHE A 103 LINK O4 BGC B 1 C1 BGC B 2 1555 1555 1.42 LINK O4 BGC B 2 C1 BGC B 3 1555 1555 1.41 LINK O4 BGC B 3 C1 BGC B 4 1555 1555 1.41 LINK O THR A 31 CA CA A 204 1555 1555 2.39 LINK OE2 GLU A 33 CA CA A 204 1555 1555 2.31 LINK OG SER A 60 CA CA A 204 1555 1555 2.48 LINK O LYS A 61 CA CA A 204 1555 1555 2.33 LINK OD1 ASP A 198 CA CA A 204 1555 1555 2.46 LINK OD2 ASP A 198 CA CA A 204 1555 1555 2.52 LINK CA CA A 204 O HOH A 366 1555 1555 2.39 CISPEP 1 LEU A 28 PRO A 29 0 3.12 CRYST1 39.576 63.900 75.619 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025268 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015649 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013224 0.00000