PDB Short entry for 3ARF HEADER IMMUNE SYSTEM 27-NOV-10 3ARF TITLE TERNARY CRYSTAL STRUCTURE OF THE MOUSE NKT TCR-CD1D-C20:2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HEAVY CHAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NKT VALPHA14-JALPHA18,NKT VALPHA14-JALPHA18; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: CHIMERA OF MOUSE VARIABLE DOMAIN AND HUMAN CONSTANT COMPND 15 DOMAIN,CHIMERA OF MOUSE VARIABLE DOMAIN AND HUMAN CONSTANT DOMAIN; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: VBETA8.2,VBETA8.2; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES; COMPND 20 OTHER_DETAILS: CHIMERA OF MOUSE VARIABLE DOMAIN AND HUMAN CONSTANT COMPND 21 DOMAIN,CHIMERA OF MOUSE VARIABLE DOMAIN AND HUMAN CONSTANT DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CD1D1, CD1.1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBACP10PH; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: B2M; SOURCE 16 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 17 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PBACP10PH; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: MUS MUSCULUS, HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: MOUSE, HUMAN; SOURCE 24 ORGANISM_TAXID: 10090, 9606; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 29 MOL_ID: 4; SOURCE 30 ORGANISM_SCIENTIFIC: MUS MUSCULUS, HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: MOUSE, HUMAN; SOURCE 32 ORGANISM_TAXID: 10090, 9606; SOURCE 33 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 35 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 36 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS MOUSE CD1D, MOUSE NKT TCR, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.S.WUN,J.ROSSJOHN REVDAT 5 01-NOV-23 3ARF 1 HETSYN REVDAT 4 29-JUL-20 3ARF 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 22-JAN-20 3ARF 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQADV LINK REVDAT 2 29-JAN-14 3ARF 1 JRNL VERSN REVDAT 1 30-MAR-11 3ARF 0 JRNL AUTH K.S.WUN,G.CAMERON,O.PATEL,S.S.PANG,D.G.PELLICCI, JRNL AUTH 2 L.C.SULLIVAN,S.KESHIPEDDY,M.H.YOUNG,A.P.ULDRICH,M.S.THAKUR, JRNL AUTH 3 S.K.RICHARDSON,A.R.HOWELL,P.A.ILLARIONOV,A.G.BROOKS, JRNL AUTH 4 G.S.BESRA,J.MCCLUSKEY,L.GAPIN,S.A.PORCELLI,D.I.GODFREY, JRNL AUTH 5 J.ROSSJOHN JRNL TITL A MOLECULAR BASIS FOR THE EXQUISITE CD1D-RESTRICTED ANTIGEN JRNL TITL 2 SPECIFICITY AND FUNCTIONAL RESPONSES OF NATURAL KILLER T JRNL TITL 3 CELLS JRNL REF IMMUNITY V. 34 327 2011 JRNL REFN ISSN 1074-7613 JRNL PMID 21376639 JRNL DOI 10.1016/J.IMMUNI.2011.02.001 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 26099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1395 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1791 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6332 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 129 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.08000 REMARK 3 B22 (A**2) : 6.20000 REMARK 3 B33 (A**2) : -5.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.409 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.366 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 43.907 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.861 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6655 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9103 ; 0.940 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 825 ; 4.961 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 295 ;34.681 ;24.305 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 918 ;14.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;13.445 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1017 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5135 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4142 ; 0.127 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6643 ; 0.240 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2513 ; 0.335 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2459 ; 0.568 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 185 REMARK 3 RESIDUE RANGE : A 650 A 650 REMARK 3 RESIDUE RANGE : A 400 A 401 REMARK 3 RESIDUE RANGE : A 314 A 315 REMARK 3 RESIDUE RANGE : A 501 A 502 REMARK 3 ORIGIN FOR THE GROUP (A): -14.1990 -46.8793 -73.5793 REMARK 3 T TENSOR REMARK 3 T11: 0.2201 T22: 0.2916 REMARK 3 T33: 0.2443 T12: 0.0217 REMARK 3 T13: 0.0152 T23: -0.2097 REMARK 3 L TENSOR REMARK 3 L11: 2.7997 L22: 2.5849 REMARK 3 L33: 6.0144 L12: -1.2792 REMARK 3 L13: 1.4343 L23: -0.4937 REMARK 3 S TENSOR REMARK 3 S11: 0.0609 S12: -0.0689 S13: -0.0214 REMARK 3 S21: -0.0960 S22: 0.0106 S23: 0.1271 REMARK 3 S31: -0.1784 S32: 0.1596 S33: -0.0714 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0130 -46.2001-101.1659 REMARK 3 T TENSOR REMARK 3 T11: 0.2961 T22: 0.2422 REMARK 3 T33: 0.2362 T12: -0.0271 REMARK 3 T13: 0.0603 T23: -0.1516 REMARK 3 L TENSOR REMARK 3 L11: 3.3625 L22: 1.4516 REMARK 3 L33: 5.8421 L12: 0.9648 REMARK 3 L13: 0.5797 L23: -1.1117 REMARK 3 S TENSOR REMARK 3 S11: -0.1148 S12: 0.0940 S13: 0.2108 REMARK 3 S21: -0.2273 S22: 0.0198 S23: -0.1731 REMARK 3 S31: -0.2687 S32: 0.7728 S33: 0.0950 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 114 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1473 -36.4318 -41.9140 REMARK 3 T TENSOR REMARK 3 T11: 0.0958 T22: 0.2620 REMARK 3 T33: 0.2259 T12: -0.0437 REMARK 3 T13: 0.1048 T23: -0.1542 REMARK 3 L TENSOR REMARK 3 L11: 5.0366 L22: 2.8655 REMARK 3 L33: 11.8442 L12: -0.0918 REMARK 3 L13: 3.4468 L23: 3.0517 REMARK 3 S TENSOR REMARK 3 S11: -0.1439 S12: -0.8881 S13: 0.1398 REMARK 3 S21: 0.0094 S22: 0.0566 S23: 0.1628 REMARK 3 S31: -0.1136 S32: -0.0877 S33: 0.0873 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 4 D 116 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5147 -50.9987 -49.2453 REMARK 3 T TENSOR REMARK 3 T11: 0.2333 T22: 0.2752 REMARK 3 T33: 0.2313 T12: 0.0562 REMARK 3 T13: -0.0520 T23: -0.1838 REMARK 3 L TENSOR REMARK 3 L11: 7.9963 L22: 4.7089 REMARK 3 L33: 6.5909 L12: 0.6174 REMARK 3 L13: 1.8960 L23: 1.8025 REMARK 3 S TENSOR REMARK 3 S11: 0.4050 S12: -0.0684 S13: -0.6121 REMARK 3 S21: 0.1795 S22: 0.0439 S23: -0.0503 REMARK 3 S31: 0.7161 S32: 0.3721 S33: -0.4489 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 115 C 204 REMARK 3 ORIGIN FOR THE GROUP (A): 19.4137 -28.1655 -15.8291 REMARK 3 T TENSOR REMARK 3 T11: 0.2995 T22: 0.0273 REMARK 3 T33: 0.0497 T12: 0.0412 REMARK 3 T13: 0.0034 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 6.7965 L22: 5.1161 REMARK 3 L33: 8.2561 L12: 0.4503 REMARK 3 L13: -1.0861 L23: 2.4312 REMARK 3 S TENSOR REMARK 3 S11: 0.2148 S12: 0.0945 S13: 0.2881 REMARK 3 S21: -0.3925 S22: -0.1280 S23: -0.2475 REMARK 3 S31: -0.3109 S32: -0.2423 S33: -0.0868 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 117 D 244 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2854 -43.3629 -21.2493 REMARK 3 T TENSOR REMARK 3 T11: 0.1469 T22: 0.2368 REMARK 3 T33: 0.3053 T12: 0.0853 REMARK 3 T13: -0.1499 T23: -0.1063 REMARK 3 L TENSOR REMARK 3 L11: 3.8893 L22: 2.3942 REMARK 3 L33: 9.0474 L12: 0.0227 REMARK 3 L13: -2.8656 L23: 2.4541 REMARK 3 S TENSOR REMARK 3 S11: 0.1173 S12: 0.4680 S13: -0.4541 REMARK 3 S21: 0.1101 S22: -0.1214 S23: -0.1943 REMARK 3 S31: 0.2562 S32: 0.3853 S33: 0.0041 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 186 A 300 REMARK 3 ORIGIN FOR THE GROUP (A): -23.9785 -50.6798-111.9317 REMARK 3 T TENSOR REMARK 3 T11: 0.2766 T22: 0.0841 REMARK 3 T33: 0.1773 T12: -0.0064 REMARK 3 T13: -0.0669 T23: 0.0784 REMARK 3 L TENSOR REMARK 3 L11: 1.3995 L22: 3.2367 REMARK 3 L33: 3.8915 L12: -0.0021 REMARK 3 L13: -0.2476 L23: 1.4628 REMARK 3 S TENSOR REMARK 3 S11: -0.2406 S12: 0.0894 S13: 0.3285 REMARK 3 S21: -0.3757 S22: 0.2012 S23: 0.0964 REMARK 3 S31: -0.3280 S32: -0.2064 S33: 0.0394 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3ARF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000029602. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95428 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27541 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.50 REMARK 200 R MERGE (I) : 0.36800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.80 REMARK 200 R MERGE FOR SHELL (I) : 1.55400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3HE6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 400, 0.1M AMMONIUM ACETATE, REMARK 280 0.1M BIS TRIS, PH 5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.47500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 117.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.52300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 117.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.47500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.52300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 GLN A 5 REMARK 465 LYS A 6 REMARK 465 PRO A 108 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 SER C 185 REMARK 465 GLU C 208 REMARK 465 SER C 209 REMARK 465 SER C 210 REMARK 465 GLU D 1 REMARK 465 ALA D 2 REMARK 465 ALA D 3 REMARK 465 ALA D 97 REMARK 465 GLY D 98 REMARK 465 GLY D 99 REMARK 465 ASN D 100 REMARK 465 TYR D 101 REMARK 465 ALA D 102 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 21 CD NE CZ NH1 NH2 REMARK 470 SER A 24 OG REMARK 470 ILE A 47 CD1 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 SER A 89 OG REMARK 470 LYS A 91 CD CE NZ REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 LEU A 145 CG CD1 CD2 REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 GLN A 154 CG CD OE1 NE2 REMARK 470 MET A 162 CE REMARK 470 LEU A 170 CG CD1 CD2 REMARK 470 ARG A 173 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 177 CG CD OE1 OE2 REMARK 470 LYS A 180 CG CD CE NZ REMARK 470 LEU A 183 CG CD1 CD2 REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 SER A 199 OG REMARK 470 LYS A 216 NZ REMARK 470 GLN A 227 CD OE1 NE2 REMARK 470 GLU A 254 OE1 OE2 REMARK 470 GLN A 273 CD OE1 NE2 REMARK 470 ILE A 276 CD1 REMARK 470 LEU A 282 CG CD1 CD2 REMARK 470 ILE A 285 CD1 REMARK 470 LYS A 290 CE NZ REMARK 470 ARG A 296 CZ NH1 NH2 REMARK 470 HIS A 299 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 300 CG ND1 CD2 CE1 NE2 REMARK 470 ILE B 1 CG1 CG2 CD1 REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 GLN B 29 CD OE1 NE2 REMARK 470 ILE B 35 CD1 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 LYS B 45 CE NZ REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 ARG B 81 CD NE CZ NH1 NH2 REMARK 470 LYS B 83 CD CE NZ REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 MET B 99 SD CE REMARK 470 GLU C 4 CD OE1 OE2 REMARK 470 SER C 9 OG REMARK 470 ARG C 13 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 41 CG CD CE NZ REMARK 470 LYS C 55 CG CD CE NZ REMARK 470 ASP C 69 OD1 OD2 REMARK 470 LYS C 132 NZ REMARK 470 SER C 134 OG REMARK 470 LYS C 136 CE NZ REMARK 470 GLN C 147 CG CD OE1 NE2 REMARK 470 LYS C 154 CG CD CE NZ REMARK 470 SER C 156 OG REMARK 470 ASN C 183 CG OD1 ND2 REMARK 470 LYS C 184 CG CD CE NZ REMARK 470 ILE C 198 CG1 CG2 CD1 REMARK 470 GLU C 200 CG CD OE1 OE2 REMARK 470 ARG D 9 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 18 CD CE NZ REMARK 470 SER D 22 OG REMARK 470 THR D 55 OG1 CG2 REMARK 470 LYS D 57 NZ REMARK 470 LYS D 66 CD CE NZ REMARK 470 SER D 68 OG REMARK 470 SER D 71 OG REMARK 470 GLU D 73 CG CD OE1 OE2 REMARK 470 SER D 76 OG REMARK 470 LEU D 81 CD1 CD2 REMARK 470 GLU D 118 CG CD OE1 OE2 REMARK 470 ASP D 119 CG OD1 OD2 REMARK 470 LYS D 121 CD CE NZ REMARK 470 GLU D 135 CG CD OE1 OE2 REMARK 470 LYS D 167 CG CD CE NZ REMARK 470 LYS D 181 CG CD CE NZ REMARK 470 ARG D 208 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 222 CG CD OE1 OE2 REMARK 470 ASN D 223 CG OD1 ND2 REMARK 470 GLU D 225 CG CD OE1 OE2 REMARK 470 ASP D 229 CG OD1 OD2 REMARK 470 ARG D 230 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 232 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 34 46.53 -142.08 REMARK 500 LYS A 57 42.80 -108.77 REMARK 500 MET A 88 41.68 -103.64 REMARK 500 LYS A 91 -77.91 -70.46 REMARK 500 ALA A 255 105.20 -38.09 REMARK 500 ALA C 79 73.71 58.40 REMARK 500 ASP C 83 3.63 -69.73 REMARK 500 THR C 85 99.73 -69.69 REMARK 500 THR D 26 66.89 -118.50 REMARK 500 ILE D 46 -70.08 -97.41 REMARK 500 GLU D 80 -70.20 -59.10 REMARK 500 ASP D 156 37.29 -80.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG E 2 REMARK 610 NAG F 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HE6 RELATED DB: PDB REMARK 900 TERNARY CRYSTAL STRUCTURE OF THE MOUSE NKT TCR-CD1D-ALPHA- REMARK 900 GALACTOSYLCERAMIDE REMARK 900 RELATED ID: 3ARB RELATED DB: PDB REMARK 900 TERNARY CRYSTAL STRUCTURE OF THE MOUSE NKT TCR-CD1D-OCH REMARK 900 RELATED ID: 3ARD RELATED DB: PDB REMARK 900 TERNARY CRYSTAL STRUCTURE OF THE MOUSE NKT TCR-CD1D-3'DEOXY-ALPHA- REMARK 900 GALACTOSYLCERAMIDE REMARK 900 RELATED ID: 3ARE RELATED DB: PDB REMARK 900 TERNARY CRYSTAL STRUCTURE OF THE MOUSE NKT TCR-CD1D-4'DEOXY-ALPHA- REMARK 900 GALACTOSYLCERAMIDE REMARK 900 RELATED ID: 3ARG RELATED DB: PDB REMARK 900 TERNARY CRYSTAL STRUCTURE OF THE MOUSE NKT TCR-CD1D-ALPHA- REMARK 900 GLUCOSYLCERAMIDE(C20:2) REMARK 999 REMARK 999 SEQUENCE REMARK 999 FOR CHAIN C, RESIDUES 1 TO 116 IS MOUSE VARIABLE DOMAIN AND 117-210 REMARK 999 IS HUMAN CONSTANT DOMAIN. FOR CHAIN D, RESIDUES 1 TO 117 IS MOUSE REMARK 999 VARIABLE DOMAIN AND 118-247 IS HUMAN CONSTANT DOMAIN. THE SWISS- REMARK 999 PROT ENTRY P11609 CONFLICTS WITH BRADBURY ET AL., 1988 WHICH REMARK 999 SUGGESTS A HISTIDINE IN PLACE OF ASPARTATE. SEQUENCE IN THIS PDB REMARK 999 AGREES WITH THE CITATION. DBREF 3ARF A 1 279 UNP P11609 CD1D1_MOUSE 19 297 DBREF 3ARF B 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 3ARF C 1 116 PDB 3ARF 3ARF 1 116 DBREF 3ARF C 117 210 PDB 3ARF 3ARF 117 210 DBREF 3ARF D 1 117 PDB 3ARF 3ARF 1 117 DBREF 3ARF D 118 247 PDB 3ARF 3ARF 118 247 SEQADV 3ARF HIS A 201 UNP P11609 ASP 219 CONFLICT SEQADV 3ARF GLY A 280 UNP P11609 EXPRESSION TAG SEQADV 3ARF SER A 281 UNP P11609 EXPRESSION TAG SEQADV 3ARF LEU A 282 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 283 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 284 UNP P11609 EXPRESSION TAG SEQADV 3ARF ILE A 285 UNP P11609 EXPRESSION TAG SEQADV 3ARF LEU A 286 UNP P11609 EXPRESSION TAG SEQADV 3ARF ASP A 287 UNP P11609 EXPRESSION TAG SEQADV 3ARF ALA A 288 UNP P11609 EXPRESSION TAG SEQADV 3ARF GLN A 289 UNP P11609 EXPRESSION TAG SEQADV 3ARF LYS A 290 UNP P11609 EXPRESSION TAG SEQADV 3ARF MET A 291 UNP P11609 EXPRESSION TAG SEQADV 3ARF VAL A 292 UNP P11609 EXPRESSION TAG SEQADV 3ARF TRP A 293 UNP P11609 EXPRESSION TAG SEQADV 3ARF ASN A 294 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 295 UNP P11609 EXPRESSION TAG SEQADV 3ARF ARG A 296 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 297 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 298 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 299 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 300 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 301 UNP P11609 EXPRESSION TAG SEQADV 3ARF HIS A 302 UNP P11609 EXPRESSION TAG SEQRES 1 A 302 SER GLU ALA GLN GLN LYS ASN TYR THR PHE ARG CYS LEU SEQRES 2 A 302 GLN MET SER SER PHE ALA ASN ARG SER TRP SER ARG THR SEQRES 3 A 302 ASP SER VAL VAL TRP LEU GLY ASP LEU GLN THR HIS ARG SEQRES 4 A 302 TRP SER ASN ASP SER ALA THR ILE SER PHE THR LYS PRO SEQRES 5 A 302 TRP SER GLN GLY LYS LEU SER ASN GLN GLN TRP GLU LYS SEQRES 6 A 302 LEU GLN HIS MET PHE GLN VAL TYR ARG VAL SER PHE THR SEQRES 7 A 302 ARG ASP ILE GLN GLU LEU VAL LYS MET MET SER PRO LYS SEQRES 8 A 302 GLU ASP TYR PRO ILE GLU ILE GLN LEU SER ALA GLY CYS SEQRES 9 A 302 GLU MET TYR PRO GLY ASN ALA SER GLU SER PHE LEU HIS SEQRES 10 A 302 VAL ALA PHE GLN GLY LYS TYR VAL VAL ARG PHE TRP GLY SEQRES 11 A 302 THR SER TRP GLN THR VAL PRO GLY ALA PRO SER TRP LEU SEQRES 12 A 302 ASP LEU PRO ILE LYS VAL LEU ASN ALA ASP GLN GLY THR SEQRES 13 A 302 SER ALA THR VAL GLN MET LEU LEU ASN ASP THR CYS PRO SEQRES 14 A 302 LEU PHE VAL ARG GLY LEU LEU GLU ALA GLY LYS SER ASP SEQRES 15 A 302 LEU GLU LYS GLN GLU LYS PRO VAL ALA TRP LEU SER SER SEQRES 16 A 302 VAL PRO SER SER ALA HIS GLY HIS ARG GLN LEU VAL CYS SEQRES 17 A 302 HIS VAL SER GLY PHE TYR PRO LYS PRO VAL TRP VAL MET SEQRES 18 A 302 TRP MET ARG GLY ASP GLN GLU GLN GLN GLY THR HIS ARG SEQRES 19 A 302 GLY ASP PHE LEU PRO ASN ALA ASP GLU THR TRP TYR LEU SEQRES 20 A 302 GLN ALA THR LEU ASP VAL GLU ALA GLY GLU GLU ALA GLY SEQRES 21 A 302 LEU ALA CYS ARG VAL LYS HIS SER SER LEU GLY GLY GLN SEQRES 22 A 302 ASP ILE ILE LEU TYR TRP GLY SER LEU HIS HIS ILE LEU SEQRES 23 A 302 ASP ALA GLN LYS MET VAL TRP ASN HIS ARG HIS HIS HIS SEQRES 24 A 302 HIS HIS HIS SEQRES 1 B 99 ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS TYR SEQRES 3 B 99 VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN MET SEQRES 4 B 99 LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SER SEQRES 5 B 99 ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE LEU SEQRES 6 B 99 ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR TYR SEQRES 7 B 99 ALA CYS ARG VAL LYS HIS ALA SER MET ALA GLU PRO LYS SEQRES 8 B 99 THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 C 207 THR GLN VAL GLU GLN SER PRO GLN SER LEU VAL VAL ARG SEQRES 2 C 207 GLN GLY GLU ASN SER VAL LEU GLN CYS ASN TYR SER VAL SEQRES 3 C 207 THR PRO ASP ASN HIS LEU ARG TRP PHE LYS GLN ASP THR SEQRES 4 C 207 GLY LYS GLY LEU VAL SER LEU THR VAL LEU VAL ASP GLN SEQRES 5 C 207 LYS ASP LYS THR SER ASN GLY ARG TYR SER ALA THR LEU SEQRES 6 C 207 ASP LYS ASP ALA LYS HIS SER THR LEU HIS ILE THR ALA SEQRES 7 C 207 THR LEU LEU ASP ASP THR ALA THR TYR ILE CYS VAL VAL SEQRES 8 C 207 GLY ASP ARG GLY SER ALA LEU GLY ARG LEU HIS PHE GLY SEQRES 9 C 207 ALA GLY THR GLN LEU ILE VAL ILE PRO ASP ILE GLN ASN SEQRES 10 C 207 PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SER SEQRES 11 C 207 SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE ASP SER SEQRES 12 C 207 GLN THR ASN VAL SER GLN SER LYS ASP SER ASP VAL TYR SEQRES 13 C 207 ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER MET ASP SEQRES 14 C 207 PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN LYS SER SEQRES 15 C 207 ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER ILE ILE SEQRES 16 C 207 PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 D 244 GLU ALA ALA VAL THR GLN SER PRO ARG ASN LYS VAL ALA SEQRES 2 D 244 VAL THR GLY GLY LYS VAL THR LEU SER CYS ASN GLN THR SEQRES 3 D 244 ASN ASN HIS ASN ASN MET TYR TRP TYR ARG GLN ASP THR SEQRES 4 D 244 GLY HIS GLY LEU ARG LEU ILE HIS TYR SER TYR GLY ALA SEQRES 5 D 244 GLY SER THR GLU LYS GLY ASP ILE PRO ASP GLY TYR LYS SEQRES 6 D 244 ALA SER ARG PRO SER GLN GLU ASN PHE SER LEU ILE LEU SEQRES 7 D 244 GLU LEU ALA THR PRO SER GLN THR SER VAL TYR PHE CYS SEQRES 8 D 244 ALA SER GLY ASP ALA GLY GLY ASN TYR ALA GLU GLN PHE SEQRES 9 D 244 PHE GLY PRO GLY THR ARG LEU THR VAL LEU GLU ASP LEU SEQRES 10 D 244 LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SEQRES 11 D 244 SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU SEQRES 12 D 244 VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU SEQRES 13 D 244 LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY SEQRES 14 D 244 VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA SEQRES 15 D 244 LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG SEQRES 16 D 244 VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE SEQRES 17 D 244 ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP SEQRES 18 D 244 GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE SEQRES 19 D 244 VAL SER ALA GLU ALA TRP GLY ARG ALA ASP MODRES 3ARF ASN A 165 ASN GLYCOSYLATION SITE MODRES 3ARF ASN A 20 ASN GLYCOSYLATION SITE MODRES 3ARF ASN A 42 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 10 HET NAG F 1 14 HET NAG F 2 9 HET NAG G 1 14 HET NAG G 2 14 HET DB3 A 650 54 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM DB3 (11Z,14E)-N-[(2S,3S,4R)-1-(ALPHA-D- HETNAM 2 DB3 GALACTOPYRANOSYLOXY)-3,4-DIHYDROXYOCTADECAN-2- HETNAM 3 DB3 YL]ICOSA-11,14-DIENAMIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NAG 6(C8 H15 N O6) FORMUL 8 DB3 C44 H83 N O9 FORMUL 9 HOH *35(H2 O) HELIX 1 1 SER A 59 MET A 88 1 30 HELIX 2 2 PRO A 140 TRP A 142 5 3 HELIX 3 3 LEU A 143 ALA A 152 1 10 HELIX 4 4 ASP A 153 ASP A 166 1 14 HELIX 5 5 ASP A 166 GLY A 179 1 14 HELIX 6 6 GLY A 179 GLU A 184 1 6 HELIX 7 7 HIS A 267 GLY A 271 5 5 HELIX 8 8 SER A 281 LYS A 290 1 10 HELIX 9 9 LEU C 81 THR C 85 5 5 HELIX 10 10 ARG C 169 ASP C 172 5 4 HELIX 11 11 THR D 83 THR D 87 5 5 HELIX 12 12 SER D 134 GLN D 142 1 9 HELIX 13 13 ALA D 201 ASN D 206 1 6 SHEET 1 A 8 SER A 48 PHE A 49 0 SHEET 2 A 8 LEU A 35 TRP A 40 -1 N ARG A 39 O SER A 48 SHEET 3 A 8 SER A 24 LEU A 32 -1 N VAL A 30 O THR A 37 SHEET 4 A 8 TYR A 8 PHE A 18 -1 N MET A 15 O ASP A 27 SHEET 5 A 8 ILE A 96 MET A 106 -1 O ILE A 98 N SER A 16 SHEET 6 A 8 SER A 112 PHE A 120 -1 O HIS A 117 N SER A 101 SHEET 7 A 8 LYS A 123 TRP A 129 -1 O VAL A 126 N VAL A 118 SHEET 8 A 8 SER A 132 THR A 135 -1 O GLN A 134 N ARG A 127 SHEET 1 B 4 VAL A 190 PRO A 197 0 SHEET 2 B 4 HIS A 203 PHE A 213 -1 O VAL A 207 N SER A 194 SHEET 3 B 4 TRP A 245 GLU A 254 -1 O VAL A 253 N ARG A 204 SHEET 4 B 4 HIS A 233 ARG A 234 -1 N HIS A 233 O THR A 250 SHEET 1 C 4 VAL A 190 PRO A 197 0 SHEET 2 C 4 HIS A 203 PHE A 213 -1 O VAL A 207 N SER A 194 SHEET 3 C 4 TRP A 245 GLU A 254 -1 O VAL A 253 N ARG A 204 SHEET 4 C 4 LEU A 238 PRO A 239 -1 N LEU A 238 O TYR A 246 SHEET 1 D 4 GLN A 227 GLU A 228 0 SHEET 2 D 4 TRP A 219 ARG A 224 -1 N ARG A 224 O GLN A 227 SHEET 3 D 4 ALA A 262 LYS A 266 -1 O ARG A 264 N MET A 221 SHEET 4 D 4 ILE A 275 TYR A 278 -1 O LEU A 277 N CYS A 263 SHEET 1 E 4 GLN B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 E 4 GLU B 50 MET B 51 -1 N GLU B 50 O HIS B 67 SHEET 1 F 4 GLN B 6 SER B 11 0 SHEET 2 F 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 F 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 F 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 G 4 LYS B 44 LYS B 45 0 SHEET 2 G 4 ILE B 35 LYS B 41 -1 N LYS B 41 O LYS B 44 SHEET 3 G 4 TYR B 78 HIS B 84 -1 O ARG B 81 N GLN B 38 SHEET 4 G 4 LYS B 91 TYR B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 H 5 VAL C 3 SER C 6 0 SHEET 2 H 5 SER C 18 TYR C 24 -1 O ASN C 23 N GLU C 4 SHEET 3 H 5 HIS C 72 ILE C 77 -1 O LEU C 75 N LEU C 20 SHEET 4 H 5 TYR C 62 ASP C 67 -1 N ASP C 67 O HIS C 72 SHEET 5 H 5 LYS C 53 ASN C 58 -1 N ASP C 54 O LEU C 66 SHEET 1 I 5 SER C 9 ARG C 13 0 SHEET 2 I 5 THR C 110 ILE C 115 1 O ILE C 113 N LEU C 10 SHEET 3 I 5 THR C 87 GLY C 93 -1 N TYR C 88 O THR C 110 SHEET 4 I 5 HIS C 31 GLN C 37 -1 N GLN C 37 O THR C 87 SHEET 5 I 5 LEU C 43 LEU C 49 -1 O LEU C 49 N LEU C 32 SHEET 1 J 4 SER C 9 ARG C 13 0 SHEET 2 J 4 THR C 110 ILE C 115 1 O ILE C 113 N LEU C 10 SHEET 3 J 4 THR C 87 GLY C 93 -1 N TYR C 88 O THR C 110 SHEET 4 J 4 LEU C 104 PHE C 106 -1 O HIS C 105 N VAL C 92 SHEET 1 K 8 VAL C 158 ILE C 160 0 SHEET 2 K 8 SER C 177 SER C 182 -1 O TRP C 181 N TYR C 159 SHEET 3 K 8 SER C 137 THR C 142 -1 N PHE C 141 O ALA C 178 SHEET 4 K 8 ALA C 124 ASP C 130 -1 N TYR C 126 O LEU C 140 SHEET 5 K 8 GLU D 127 GLU D 132 -1 O GLU D 132 N ARG C 129 SHEET 6 K 8 LYS D 143 PHE D 153 -1 O THR D 151 N GLU D 127 SHEET 7 K 8 TYR D 191 SER D 200 -1 O VAL D 199 N ALA D 144 SHEET 8 K 8 VAL D 173 THR D 175 -1 N CYS D 174 O ARG D 196 SHEET 1 L 8 VAL C 158 ILE C 160 0 SHEET 2 L 8 SER C 177 SER C 182 -1 O TRP C 181 N TYR C 159 SHEET 3 L 8 SER C 137 THR C 142 -1 N PHE C 141 O ALA C 178 SHEET 4 L 8 ALA C 124 ASP C 130 -1 N TYR C 126 O LEU C 140 SHEET 5 L 8 GLU D 127 GLU D 132 -1 O GLU D 132 N ARG C 129 SHEET 6 L 8 LYS D 143 PHE D 153 -1 O THR D 151 N GLU D 127 SHEET 7 L 8 TYR D 191 SER D 200 -1 O VAL D 199 N ALA D 144 SHEET 8 L 8 LEU D 180 LYS D 181 -1 N LEU D 180 O ALA D 192 SHEET 1 M 2 LEU C 166 MET C 168 0 SHEET 2 M 2 PHE C 173 SER C 175 -1 O PHE C 173 N MET C 168 SHEET 1 N 4 THR D 5 SER D 7 0 SHEET 2 N 4 VAL D 19 ASN D 24 -1 O ASN D 24 N THR D 5 SHEET 3 N 4 SER D 76 LEU D 79 -1 O LEU D 79 N VAL D 19 SHEET 4 N 4 LYS D 66 SER D 68 -1 N LYS D 66 O ILE D 78 SHEET 1 O 6 ASN D 10 VAL D 14 0 SHEET 2 O 6 THR D 112 LEU D 117 1 O THR D 115 N ALA D 13 SHEET 3 O 6 SER D 88 SER D 94 -1 N TYR D 90 O THR D 112 SHEET 4 O 6 MET D 32 GLN D 37 -1 N GLN D 37 O VAL D 89 SHEET 5 O 6 ARG D 44 SER D 49 -1 O ILE D 46 N TRP D 34 SHEET 6 O 6 GLU D 56 LYS D 57 -1 O GLU D 56 N TYR D 48 SHEET 1 P 4 ASN D 10 VAL D 14 0 SHEET 2 P 4 THR D 112 LEU D 117 1 O THR D 115 N ALA D 13 SHEET 3 P 4 SER D 88 SER D 94 -1 N TYR D 90 O THR D 112 SHEET 4 P 4 PHE D 107 PHE D 108 -1 O PHE D 107 N SER D 94 SHEET 1 Q 4 LYS D 167 VAL D 169 0 SHEET 2 Q 4 VAL D 158 VAL D 164 -1 N VAL D 164 O LYS D 167 SHEET 3 Q 4 HIS D 210 PHE D 217 -1 O GLN D 214 N SER D 161 SHEET 4 Q 4 GLN D 236 TRP D 243 -1 O GLN D 236 N PHE D 217 SSBOND 1 CYS A 104 CYS A 168 1555 1555 2.06 SSBOND 2 CYS A 208 CYS A 263 1555 1555 2.02 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 22 CYS C 90 1555 1555 2.05 SSBOND 5 CYS C 139 CYS C 189 1555 1555 2.04 SSBOND 6 CYS C 164 CYS D 174 1555 1555 2.03 SSBOND 7 CYS D 23 CYS D 92 1555 1555 2.03 SSBOND 8 CYS D 148 CYS D 213 1555 1555 2.04 LINK ND2 ASN A 20 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 42 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN A 165 C1 NAG G 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.46 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 CISPEP 1 TYR A 94 PRO A 95 0 2.55 CISPEP 2 TYR A 214 PRO A 215 0 4.03 CISPEP 3 ARG A 296 HIS A 297 0 -1.42 CISPEP 4 HIS B 31 PRO B 32 0 -1.32 CISPEP 5 SER C 6 PRO C 7 0 -2.92 CISPEP 6 THR C 27 PRO C 28 0 -0.92 CISPEP 7 SER D 7 PRO D 8 0 5.50 CISPEP 8 TYR D 154 PRO D 155 0 0.36 CRYST1 58.950 87.046 234.860 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016964 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011488 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004258 0.00000