PDB Short entry for 3B8K
HEADER    TRANSFERASE                             01-NOV-07   3B8K              
TITLE     STRUCTURE OF THE TRUNCATED HUMAN DIHYDROLIPOYL ACETYLTRANSFERASE (E2) 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE;             
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: C-TERMINAL CATALYTIC DOMAIN;                               
COMPND   5 SYNONYM: PYRUVATE DEHYDROGENASE COMPLEX E2 SUBUNIT; PDCE2; E2;       
COMPND   6 DIHYDROLIPOAMIDE S- ACETYLTRANSFERASE COMPONENT OF PYRUVATE          
COMPND   7 DEHYDROGENASE COMPLEX; PDC-E2; 70 KDA MITOCHONDRIAL AUTOANTIGEN OF   
COMPND   8 PRIMARY BILIARY CIRRHOSIS; PBC; M2 ANTIGEN COMPLEX 70 KDA SUBUNIT;   
COMPND   9 EC: 2.3.1.12;                                                        
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 OTHER_DETAILS: COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX,          
COMPND  12 MITOCHONDRIAL                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: DLAT, DLTA;                                                    
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID                               
KEYWDS    CENTRAL BETA-SHEET SURROUNDED BY FIVE ALPHA-HELICES, TRANSFERASE      
EXPDTA    ELECTRON MICROSCOPY                                                   
AUTHOR    X.YU,Y.HIROMASA,H.TSEN,J.K.STOOPS,T.E.ROCHE,Z.H.ZHOU                  
REVDAT   5   21-FEB-24 3B8K    1       REMARK                                   
REVDAT   4   18-JUL-18 3B8K    1       REMARK                                   
REVDAT   3   02-FEB-10 3B8K    1       REMARK                                   
REVDAT   2   24-FEB-09 3B8K    1       VERSN                                    
REVDAT   1   22-JAN-08 3B8K    0                                                
JRNL        AUTH   X.YU,Y.HIROMASA,H.TSEN,J.K.STOOPS,T.E.ROCHE,Z.H.ZHOU         
JRNL        TITL   STRUCTURES OF THE HUMAN PYRUVATE DEHYDROGENASE COMPLEX       
JRNL        TITL 2 CORES: A HIGHLY CONSERVED CATALYTIC CENTER WITH FLEXIBLE     
JRNL        TITL 3 N-TERMINAL DOMAINS                                           
JRNL        REF    STRUCTURE                     V.  16   104 2008              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   18184588                                                     
JRNL        DOI    10.1016/J.STR.2007.10.024                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    8.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   SOFTWARE PACKAGES      : UCSF CHIMERA, IMIRS                       
REMARK   3   RECONSTRUCTION SCHEMA  : NULL                                      
REMARK   3                                                                      
REMARK   3 EM MAP-MODEL FITTING AND REFINEMENT                                  
REMARK   3   PDB ENTRY                    : 1EAA                                
REMARK   3   REFINEMENT SPACE             : REAL                                
REMARK   3   REFINEMENT PROTOCOL          : RIGID BODY FIT                      
REMARK   3   REFINEMENT TARGET            : BEST FIT USING THE PROGRAM          
REMARK   3                                  CHIMERA                             
REMARK   3   OVERALL ANISOTROPIC B VALUE  : 30.000                              
REMARK   3                                                                      
REMARK   3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY                  
REMARK   3                                                                      
REMARK   3 EM IMAGE RECONSTRUCTION STATISTICS                                   
REMARK   3   NOMINAL PIXEL SIZE (ANGSTROMS)    : 2.170                          
REMARK   3   ACTUAL PIXEL SIZE  (ANGSTROMS)    : NULL                           
REMARK   3   EFFECTIVE RESOLUTION (ANGSTROMS)  : 8.800                          
REMARK   3   NUMBER OF PARTICLES               : 2432                           
REMARK   3   CTF CORRECTION METHOD             : NULL                           
REMARK   3                                                                      
REMARK   3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL                    
REMARK   3                                                                      
REMARK   3 OTHER DETAILS: ORIENTATION DETERMINATION AND 3D RECONSTRUCTION       
REMARK   3  WERE PERFORMED USING THE IMIRS SOFTWARE PACKAGE ON                  
REMARK   3  MULTIPROCESSOR MS WINDOWS XP COMPUTER WORKSTATIONS. THE             
REMARK   3  ORIENTATIONS WERE FIRST ESTIMATED FROM THE PARTICLE IMAGES IN       
REMARK   3  THE FAR-FROM-FOCUS MICROGRAPHS AND REFINED TO ABOUT 30-             
REMARK   3  RESOLUTION. THESE ORIENTATION PARAMETERS WERE THEN FURTHER          
REMARK   3  REFINED USING THE PARTICLES IN THE CLOSE-TO-FOCUS MICROGRAPHS.      
REMARK   4                                                                      
REMARK   4 3B8K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000045213.                                   
REMARK 245                                                                      
REMARK 245 EXPERIMENTAL DETAILS                                                 
REMARK 245   RECONSTRUCTION METHOD          : SINGLE PARTICLE                   
REMARK 245   SPECIMEN TYPE                  : VITREOUS ICE (CRYO EM)            
REMARK 245                                                                      
REMARK 245 ELECTRON MICROSCOPE SAMPLE                                           
REMARK 245   SAMPLE TYPE                    : PARTICLE                          
REMARK 245   PARTICLE TYPE                  : POINT                             
REMARK 245   NAME OF SAMPLE                 : HUMAN TE2                         
REMARK 245   SAMPLE CONCENTRATION (MG ML-1) : 0.20                              
REMARK 245   SAMPLE SUPPORT DETAILS         : THIS GRID PLUS SAMPLE WAS KEPT    
REMARK 245                                    AT -170 DEG C DURING IMAGING      
REMARK 245   SAMPLE VITRIFICATION DETAILS   : FLASH FREEZING IN LIQUID ETHANE   
REMARK 245   SAMPLE BUFFER                  : PBS                               
REMARK 245   PH                             : 7.20                              
REMARK 245   SAMPLE DETAILS                 : DODECAHEDRON. HUMAN TE2 WAS       
REMARK 245  PREPARED FROM SCE2, WHICH CONTAINS A PRESCISSION SITE IN THE        
REMARK 245  THIRD LINKER REGION. TREATMENT OF SCE2 WITH THE PRESCISSION         
REMARK 245  PROTEASE (AMERSHAM BIOSCIENCES) REMOVED THE N-TERMINAL 319 AMINO    
REMARK 245  ACIDS. THE RESULTING TE2 WAS PURIFIED BY GEL FILTRATION WITH        
REMARK 245  SEPHACRYL S-300HR. THE ASSEMBLY OF THE RECOMBINANT MOLECULES        
REMARK 245  INTO FULLY FUNCTIONAL, PENTAGONAL DODECAHEDRAL CORES WAS            
REMARK 245  CONFIRMED BY ANALYTICAL ULTRACENTRIFUGATION                         
REMARK 245                                                                      
REMARK 245 DATA ACQUISITION                                                     
REMARK 245   DATE OF EXPERIMENT                : 01-OCT-03                      
REMARK 245   NUMBER OF MICROGRAPHS-IMAGES      : NULL                           
REMARK 245   TEMPERATURE (KELVIN)              : 100.00                         
REMARK 245   MICROSCOPE MODEL                  : JEOL 2010F                     
REMARK 245   DETECTOR TYPE                     : GATAN ULTRASCAN 4000 (4K X     
REMARK 245                                       4K)                            
REMARK 245   MINIMUM DEFOCUS (NM)              : 600.00                         
REMARK 245   MAXIMUM DEFOCUS (NM)              : 2100.00                        
REMARK 245   MINIMUM TILT ANGLE (DEGREES)      : NULL                           
REMARK 245   MAXIMUM TILT ANGLE (DEGREES)      : NULL                           
REMARK 245   NOMINAL CS                        : 1.00                           
REMARK 245   IMAGING MODE                      : BRIGHT FIELD                   
REMARK 245   ELECTRON DOSE (ELECTRONS NM**-2)  : 1200.00                        
REMARK 245   ILLUMINATION MODE                 : FLOOD BEAM                     
REMARK 245   NOMINAL MAGNIFICATION             : 69250                          
REMARK 245   CALIBRATED MAGNIFICATION          : 69250                          
REMARK 245   SOURCE                            : FIELD EMISSION GUN             
REMARK 245   ACCELERATION VOLTAGE (KV)         : 200                            
REMARK 245   IMAGING DETAILS                   : NULL                           
REMARK 247                                                                      
REMARK 247 ELECTRON MICROSCOPY                                                  
REMARK 247  THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON          
REMARK 247  MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE              
REMARK 247  THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES           
REMARK 247  ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION         
REMARK 247  OF THE STRUCTURE FACTORS.                                           
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    HIS A 359   NE2   HIS A 359   CD2    -0.066                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    PHE A 334   CB  -  CG  -  CD2 ANGL. DEV. =   5.2 DEGREES          
REMARK 500    ASP A 336   CB  -  CG  -  OD2 ANGL. DEV. =  -8.8 DEGREES          
REMARK 500    ILE A 337   CB  -  CG1 -  CD1 ANGL. DEV. =  19.4 DEGREES          
REMARK 500    SER A 340   N   -  CA  -  CB  ANGL. DEV. =  10.6 DEGREES          
REMARK 500    ILE A 342   CB  -  CG1 -  CD1 ANGL. DEV. =  24.1 DEGREES          
REMARK 500    ARG A 349   CG  -  CD  -  NE  ANGL. DEV. =  16.0 DEGREES          
REMARK 500    ARG A 349   NE  -  CZ  -  NH2 ANGL. DEV. =  -5.3 DEGREES          
REMARK 500    HIS A 359   ND1 -  CE1 -  NE2 ANGL. DEV. =  -9.1 DEGREES          
REMARK 500    HIS A 359   CE1 -  NE2 -  CD2 ANGL. DEV. =   6.8 DEGREES          
REMARK 500    TYR A 361   CB  -  CG  -  CD2 ANGL. DEV. =   3.7 DEGREES          
REMARK 500    VAL A 366   CG1 -  CB  -  CG2 ANGL. DEV. =  28.9 DEGREES          
REMARK 500    VAL A 366   CA  -  CB  -  CG2 ANGL. DEV. = -16.7 DEGREES          
REMARK 500    LEU A 382   CB  -  CG  -  CD1 ANGL. DEV. = -11.8 DEGREES          
REMARK 500    ASP A 392   CB  -  CG  -  OD1 ANGL. DEV. =  -6.8 DEGREES          
REMARK 500    VAL A 422   CG1 -  CB  -  CG2 ANGL. DEV. = -10.5 DEGREES          
REMARK 500    VAL A 422   CA  -  CB  -  CG2 ANGL. DEV. =   9.4 DEGREES          
REMARK 500    PHE A 477   CB  -  CG  -  CD2 ANGL. DEV. =  -7.3 DEGREES          
REMARK 500    ILE A 487   O   -  C   -  N   ANGL. DEV. = -10.0 DEGREES          
REMARK 500    ALA A 506   CB  -  CA  -  C   ANGL. DEV. =  -9.9 DEGREES          
REMARK 500    ALA A 506   N   -  CA  -  CB  ANGL. DEV. =   8.8 DEGREES          
REMARK 500    ALA A 506   CA  -  C   -  O   ANGL. DEV. = -20.2 DEGREES          
REMARK 500    LEU A 511   CB  -  CG  -  CD2 ANGL. DEV. =  11.0 DEGREES          
REMARK 500    VAL A 512   CG1 -  CB  -  CG2 ANGL. DEV. = -20.0 DEGREES          
REMARK 500    VAL A 512   CA  -  CB  -  CG2 ANGL. DEV. = -31.5 DEGREES          
REMARK 500    PRO A 513   CA  -  N   -  CD  ANGL. DEV. = -11.1 DEGREES          
REMARK 500    ASP A 521   CB  -  CG  -  OD1 ANGL. DEV. =   9.4 DEGREES          
REMARK 500    ASP A 521   CB  -  CG  -  OD2 ANGL. DEV. =  -6.1 DEGREES          
REMARK 500    VAL A 522   CG1 -  CB  -  CG2 ANGL. DEV. = -18.0 DEGREES          
REMARK 500    VAL A 522   CA  -  CB  -  CG2 ANGL. DEV. =  20.8 DEGREES          
REMARK 500    ALA A 523   CB  -  CA  -  C   ANGL. DEV. =  -9.1 DEGREES          
REMARK 500    ALA A 523   N   -  CA  -  CB  ANGL. DEV. =  18.2 DEGREES          
REMARK 500    ALA A 523   O   -  C   -  N   ANGL. DEV. =  10.7 DEGREES          
REMARK 500    MET A 525   CG  -  SD  -  CE  ANGL. DEV. =  19.8 DEGREES          
REMARK 500    SER A 527   N   -  CA  -  CB  ANGL. DEV. =  15.9 DEGREES          
REMARK 500    SER A 527   CA  -  CB  -  OG  ANGL. DEV. =  27.0 DEGREES          
REMARK 500    VAL A 537   CA  -  C   -  O   ANGL. DEV. = -16.1 DEGREES          
REMARK 500    LEU A 546   CB  -  CG  -  CD1 ANGL. DEV. = -14.0 DEGREES          
REMARK 500    LEU A 553   CB  -  CA  -  C   ANGL. DEV. =  13.1 DEGREES          
REMARK 500    LEU A 553   CB  -  CG  -  CD2 ANGL. DEV. =  13.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PRO A 330      -85.58    -59.20                                   
REMARK 500    ASP A 336       89.00    169.25                                   
REMARK 500    ILE A 337      176.37     61.93                                   
REMARK 500    PRO A 338       89.52    -57.20                                   
REMARK 500    ILE A 339     -150.22    101.74                                   
REMARK 500    SER A 340       60.33     63.61                                   
REMARK 500    ILE A 342     -143.31   -161.52                                   
REMARK 500    HIS A 359     -164.73   -127.02                                   
REMARK 500    TYR A 360       95.32   -179.64                                   
REMARK 500    TYR A 361      152.26    -45.19                                   
REMARK 500    LYS A 387       90.70     62.97                                   
REMARK 500    ILE A 388      104.55    -49.99                                   
REMARK 500    GLU A 407      151.54    -15.60                                   
REMARK 500    TRP A 412      -87.20     60.21                                   
REMARK 500    MET A 413     -141.94    -65.00                                   
REMARK 500    ASP A 414      151.86    135.43                                   
REMARK 500    ARG A 418      102.16     60.12                                   
REMARK 500    ASN A 420      -85.24     25.55                                   
REMARK 500    HIS A 421       87.27    152.57                                   
REMARK 500    VAL A 422     -148.22     31.87                                   
REMARK 500    VAL A 423       76.97   -166.82                                   
REMARK 500    ALA A 433      -70.72    -59.84                                   
REMARK 500    PHE A 441     -136.16     -8.62                                   
REMARK 500    ASN A 442      110.62     85.63                                   
REMARK 500    HIS A 444       27.31    170.55                                   
REMARK 500    LYS A 446       89.60   -168.93                                   
REMARK 500    PHE A 472       47.71    163.27                                   
REMARK 500    GLN A 473     -119.55    -53.49                                   
REMARK 500    PHE A 477      139.91    175.10                                   
REMARK 500    MET A 484       25.73    -55.23                                   
REMARK 500    PHE A 485     -102.41   -170.22                                   
REMARK 500    ASN A 489       93.64     74.18                                   
REMARK 500    SER A 491     -155.44   -166.62                                   
REMARK 500    ALA A 492       56.03    119.17                                   
REMARK 500    ILE A 493      162.55    -43.84                                   
REMARK 500    ILE A 494     -100.41   -101.97                                   
REMARK 500    ILE A 501      -72.17    -79.69                                   
REMARK 500    LEU A 502      116.85    175.52                                   
REMARK 500    ALA A 506     -177.69    155.27                                   
REMARK 500    SER A 507      143.27    146.85                                   
REMARK 500    LYS A 510        2.24    -62.60                                   
REMARK 500    LEU A 511       51.60   -102.79                                   
REMARK 500    ALA A 514      -81.24    153.92                                   
REMARK 500    VAL A 522      173.11     91.43                                   
REMARK 500    SER A 524     -176.43    -18.70                                   
REMARK 500    MET A 525      145.46    173.51                                   
REMARK 500    CYS A 532      134.33   -171.33                                   
REMARK 500    ASP A 538     -154.64    123.53                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 ILE A  501     LEU A  502                 -144.47                    
REMARK 500 LEU A  511     VAL A  512                  113.47                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    ARG A 349         0.07    SIDE CHAIN                              
REMARK 500    HIS A 359         0.15    SIDE CHAIN                              
REMARK 500    PHE A 477         0.14    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY                                       
REMARK 500                                                                      
REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY                       
REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER                 
REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME;                     
REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;                            
REMARK 500 I=INSERTION CODE).                                                   
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        ANGLE                                           
REMARK 500    VAL A 333         10.32                                           
REMARK 500    SER A 340        -12.91                                           
REMARK 500    ARG A 418        -15.29                                           
REMARK 500    ALA A 506         26.66                                           
REMARK 500    ARG A 550        -10.78                                           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1EAA   RELATED DB: PDB                                   
REMARK 900 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE     
REMARK 900 MULTIENZYME COMPLEX                                                  
REMARK 900 RELATED ID: EMD-1448   RELATED DB: EMDB                              
DBREF  3B8K A  323   561  UNP    P10515   ODP2_HUMAN     376    614             
SEQRES   1 A  239  GLY PRO GLY MET ALA PRO VAL PRO THR GLY VAL PHE THR          
SEQRES   2 A  239  ASP ILE PRO ILE SER ASN ILE ARG ARG VAL ILE ALA GLN          
SEQRES   3 A  239  ARG LEU MET GLN SER LYS GLN THR ILE PRO HIS TYR TYR          
SEQRES   4 A  239  LEU SER ILE ASP VAL ASN MET GLY GLU VAL LEU LEU VAL          
SEQRES   5 A  239  ARG LYS GLU LEU ASN LYS ILE LEU GLU GLY ARG SER LYS          
SEQRES   6 A  239  ILE SER VAL ASN ASP PHE ILE ILE LYS ALA SER ALA LEU          
SEQRES   7 A  239  ALA CYS LEU LYS VAL PRO GLU ALA ASN SER SER TRP MET          
SEQRES   8 A  239  ASP THR VAL ILE ARG GLN ASN HIS VAL VAL ASP VAL SER          
SEQRES   9 A  239  VAL ALA VAL SER THR PRO ALA GLY LEU ILE THR PRO ILE          
SEQRES  10 A  239  VAL PHE ASN ALA HIS ILE LYS GLY VAL GLU THR ILE ALA          
SEQRES  11 A  239  ASN ASP VAL VAL SER LEU ALA THR LYS ALA ARG GLU GLY          
SEQRES  12 A  239  LYS LEU GLN PRO HIS GLU PHE GLN GLY GLY THR PHE THR          
SEQRES  13 A  239  ILE SER ASN LEU GLY MET PHE GLY ILE LYS ASN PHE SER          
SEQRES  14 A  239  ALA ILE ILE ASN PRO PRO GLN ALA CYS ILE LEU ALA ILE          
SEQRES  15 A  239  GLY ALA SER GLU ASP LYS LEU VAL PRO ALA ASP ASN GLU          
SEQRES  16 A  239  LYS GLY PHE ASP VAL ALA SER MET MET SER VAL THR LEU          
SEQRES  17 A  239  SER CYS ASP HIS ARG VAL VAL ASP GLY ALA VAL GLY ALA          
SEQRES  18 A  239  GLN TRP LEU ALA GLU PHE ARG LYS TYR LEU GLU LYS PRO          
SEQRES  19 A  239  ILE THR MET LEU LEU                                          
HELIX    1   1 ILE A  342  ILE A  357  1                                  16    
HELIX    2   2 GLU A  370  LEU A  378  1                                   9    
HELIX    3   3 LEU A  378  GLU A  383  1                                   6    
HELIX    4   4 SER A  389  VAL A  405  1                                  17    
HELIX    5   5 GLY A  447  GLU A  464  1                                  18    
HELIX    6   6 GLN A  468  GLN A  473  5                                   6    
HELIX    7   7 ASP A  538  LYS A  555  1                                  18    
HELIX    8   8 PRO A  556  LEU A  561  1                                   6    
SHEET    1   A 2 LEU A 362  VAL A 366  0                                        
SHEET    2   A 2 MET A 526  LEU A 530 -1  O  VAL A 528   N  ILE A 364           
SHEET    1   B 4 ILE A 439  VAL A 440  0                                        
SHEET    2   B 4 VAL A 425  VAL A 427 -1  N  VAL A 425   O  VAL A 440           
SHEET    3   B 4 PHE A 477  ASN A 481  1  O  ILE A 479   N  SER A 426           
SHEET    4   B 4 ALA A 503  ILE A 504  1  O  ILE A 504   N  SER A 480           
SHEET    1   C 2 VAL A 429  SER A 430  0                                        
SHEET    2   C 2 LEU A 435  ILE A 436 -1  O  ILE A 436   N  VAL A 429           
CISPEP   1 THR A  335    ASP A  336          0         2.34                     
CISPEP   2 VAL A  416    ILE A  417          0        -3.83                     
CISPEP   3 ILE A  417    ARG A  418          0         3.40                     
CISPEP   4 ASP A  521    VAL A  522          0       -10.13                     
CISPEP   5 VAL A  522    ALA A  523          0        -5.48                     
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000