PDB Short entry for 3BFO
HEADER    HYDROLASE                               22-NOV-07   3BFO              
TITLE     CRYSTAL STRUCTURE OF IG-LIKE C2-TYPE 2 DOMAIN OF THE HUMAN            
TITLE    2 MUCOSA-ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION             
TITLE    3 PROTEIN 1                                                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MUCOSA-ASSOCIATED LYMPHOID TISSUE LYMPHOMA                 
COMPND   3 TRANSLOCATION PROTEIN 1 (ISOFORM 2);                                 
COMPND   4 CHAIN: A, B, C, D;                                                   
COMPND   5 FRAGMENT: IG-LIKE C2-TYPE 2 DOMAIN: RESIDUES 226-314 OF              
COMPND   6 ISOFORM 2 (Q9UDY8-2);                                                
COMPND   7 SYNONYM: MALT LYMPHOMA-ASSOCIATED TRANSLOCATION,                     
COMPND   8 PARACASPASE;                                                         
COMPND   9 EC: 3.4.22.-;                                                        
COMPND  10 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: MALT1, MLT;                                                    
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28A-LIC                                
KEYWDS    HYDROLASE, IMMUNOGLOBULIN DOMAIN, NUCLEUS, PROTEASE, UBL              
KEYWDS   2 CONJUGATION PATHWAY, STRUCTURAL GENOMICS CONSORTIUM, SGC,            
KEYWDS   3 ALTERNATIVE SPLICING, CHROMOSOMAL REARRANGEMENT, CYTOPLASM           
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.R.WALKER,M.AKUTSU,D.R.LITTLER,Y.LI,J.WEIGELT,                       
AUTHOR   2 C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV,S.DHE-PAGANON,                
AUTHOR   3 STRUCTURAL GENOMICS CONSORTIUM (SGC)                                 
REVDAT   2   24-FEB-09 3BFO    1       VERSN                                    
REVDAT   1   11-DEC-07 3BFO    0                                                
JRNL        AUTH   J.R.WALKER,M.AKUTSU,D.R.LITTLER,Y.LI,J.WEIGELT,              
JRNL        AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV,                      
JRNL        AUTH 3 S.DHE-PAGANON                                                
JRNL        TITL   STRUCTURE OF THE IG-LIKE C2-TYPE 2 DOMAIN OF THE             
JRNL        TITL 2 HUMAN MUCOSA-ASSOCIATED LYMPHOID TISSUE LYMPHOMA             
JRNL        TITL 3 TRANSLOCATION PROTEIN 1.                                     
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.15 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 25.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 94.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 98073                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.179                           
REMARK   3   R VALUE            (WORKING SET) : 0.177                           
REMARK   3   FREE R VALUE                     : 0.212                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 5145                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.15                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.18                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 7040                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 91.66                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2650                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 379                          
REMARK   3   BIN FREE R VALUE                    : 0.2930                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3040                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 401                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 19.98                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.93000                                              
REMARK   3    B22 (A**2) : -0.67000                                             
REMARK   3    B33 (A**2) : -0.76000                                             
REMARK   3    B12 (A**2) : 0.17000                                              
REMARK   3    B13 (A**2) : -0.19000                                             
REMARK   3    B23 (A**2) : 0.63000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.048         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.047         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.031         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.486         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.972                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.962                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3153 ; 0.017 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  4343 ; 1.830 ; 1.968       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   410 ; 7.170 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   124 ;32.076 ;25.161       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   579 ;13.739 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):     6 ;23.895 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   475 ; 0.128 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2438 ; 0.011 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  1408 ; 0.226 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  2213 ; 0.313 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   297 ; 0.133 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):   102 ; 0.232 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    48 ; 0.162 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1990 ; 2.535 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  3226 ; 3.337 ; 2.000       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1361 ; 4.006 ; 3.000       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  1117 ; 5.090 ; 4.500       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  3351 ; 2.792 ; 3.000       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):   401 ; 9.706 ; 3.000       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  3040 ; 6.543 ; 3.000       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE          
REMARK   3  RIDING POSITIONS                                                    
REMARK   4                                                                      
REMARK   4 3BFO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-07.                  
REMARK 100 THE RCSB ID CODE IS RCSB045461.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 05-JUL-07                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : CHESS                              
REMARK 200  BEAMLINE                       : F1                                 
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.91790                            
REMARK 200  MONOCHROMATOR                  : HORIZONTAL BENT SI(111),           
REMARK 200                                   ASYMMETRICALLY CUT WITH WATER      
REMARK 200                                   COOLED CU BLOCK                    
REMARK 200  OPTICS                         : RH COATED SI MONOCHROMATIC         
REMARK 200                                   MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 270                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 103829                             
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.150                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 25.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 94.6                               
REMARK 200  DATA REDUNDANCY                : 5.100                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.06000                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 22.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.19                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 91.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.70                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.65100                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.480                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRIES 1U2H, 2AW2, 1CS6                         
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 34.75                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 VOLUME RATIO OF PROTEIN              
REMARK 280  SOLUTION (50 MG/ML) AND RESERVOIR SOLUTION (30% PEG MME 550,        
REMARK 280  0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CACODYLATE PH 6.5), VAPOR      
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 293K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1                              
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3, 4                                              
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 4                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: D                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   224                                                      
REMARK 465     GLU A   310                                                      
REMARK 465     LEU A   311                                                      
REMARK 465     ASN A   312                                                      
REMARK 465     ASN A   313                                                      
REMARK 465     LEU A   314                                                      
REMARK 465     GLY B   224                                                      
REMARK 465     GLU B   310                                                      
REMARK 465     LEU B   311                                                      
REMARK 465     ASN B   312                                                      
REMARK 465     ASN B   313                                                      
REMARK 465     LEU B   314                                                      
REMARK 465     GLY C   224                                                      
REMARK 465     GLU C   310                                                      
REMARK 465     LEU C   311                                                      
REMARK 465     ASN C   312                                                      
REMARK 465     ASN C   313                                                      
REMARK 465     LEU C   314                                                      
REMARK 465     GLY D   224                                                      
REMARK 465     GLU D   310                                                      
REMARK 465     LEU D   311                                                      
REMARK 465     ASN D   312                                                      
REMARK 465     ASN D   313                                                      
REMARK 465     LEU D   314                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER;            
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A 237    CE   NZ                                             
REMARK 470     HIS A 269    CG   ND1  CD2  CE1  NE2                             
REMARK 470     LYS A 303    NZ                                                  
REMARK 470     ASP A 309    CG   OD1  OD2                                       
REMARK 470     HIS B 269    CG   ND1  CD2  CE1  NE2                             
REMARK 470     ASP C 309    CG   OD1  OD2                                       
REMARK 470     ASP D 309    CG   OD1  OD2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    VAL C 280   CB    VAL C 280   CG1    -0.139                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH C 384        DISTANCE =  5.26 ANGSTROMS                       
REMARK 525    HOH C 384        DISTANCE =  5.26 ANGSTROMS                       
REMARK 525    HOH C 407        DISTANCE =  5.16 ANGSTROMS                       
REMARK 525    HOH C 410        DISTANCE =  7.36 ANGSTROMS                       
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2G7R   RELATED DB: PDB                                   
REMARK 900 X-RAY STRUCTURE OF THE DEATH DOMAIN OF THE HUMAN MUCOSA              
REMARK 900 ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1          
DBREF  3BFO A  226   314  UNP    Q9UDY8   MALT1_HUMAN    226    314             
DBREF  3BFO B  226   314  UNP    Q9UDY8   MALT1_HUMAN    226    314             
DBREF  3BFO C  226   314  UNP    Q9UDY8   MALT1_HUMAN    226    314             
DBREF  3BFO D  226   314  UNP    Q9UDY8   MALT1_HUMAN    226    314             
SEQADV 3BFO GLY A  224  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO SER A  225  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO GLY B  224  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO SER B  225  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO GLY C  224  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO SER C  225  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO GLY D  224  UNP  Q9UDY8              EXPRESSION TAG                 
SEQADV 3BFO SER D  225  UNP  Q9UDY8              EXPRESSION TAG                 
SEQRES   1 A   91  GLY SER LYS LEU GLN ILE CYS VAL GLU PRO THR SER GLN          
SEQRES   2 A   91  LYS LEU MET PRO GLY SER THR LEU VAL LEU GLN CYS VAL          
SEQRES   3 A   91  ALA VAL GLY SER PRO ILE PRO HIS TYR GLN TRP PHE LYS          
SEQRES   4 A   91  ASN GLU LEU PRO LEU THR HIS GLU THR LYS LYS LEU TYR          
SEQRES   5 A   91  MET VAL PRO TYR VAL ASP LEU GLU HIS GLN GLY THR TYR          
SEQRES   6 A   91  TRP CYS HIS VAL TYR ASN ASP ARG ASP SER GLN ASP SER          
SEQRES   7 A   91  LYS LYS VAL GLU ILE ILE ILE ASP GLU LEU ASN ASN LEU          
SEQRES   1 B   91  GLY SER LYS LEU GLN ILE CYS VAL GLU PRO THR SER GLN          
SEQRES   2 B   91  LYS LEU MET PRO GLY SER THR LEU VAL LEU GLN CYS VAL          
SEQRES   3 B   91  ALA VAL GLY SER PRO ILE PRO HIS TYR GLN TRP PHE LYS          
SEQRES   4 B   91  ASN GLU LEU PRO LEU THR HIS GLU THR LYS LYS LEU TYR          
SEQRES   5 B   91  MET VAL PRO TYR VAL ASP LEU GLU HIS GLN GLY THR TYR          
SEQRES   6 B   91  TRP CYS HIS VAL TYR ASN ASP ARG ASP SER GLN ASP SER          
SEQRES   7 B   91  LYS LYS VAL GLU ILE ILE ILE ASP GLU LEU ASN ASN LEU          
SEQRES   1 C   91  GLY SER LYS LEU GLN ILE CYS VAL GLU PRO THR SER GLN          
SEQRES   2 C   91  LYS LEU MET PRO GLY SER THR LEU VAL LEU GLN CYS VAL          
SEQRES   3 C   91  ALA VAL GLY SER PRO ILE PRO HIS TYR GLN TRP PHE LYS          
SEQRES   4 C   91  ASN GLU LEU PRO LEU THR HIS GLU THR LYS LYS LEU TYR          
SEQRES   5 C   91  MET VAL PRO TYR VAL ASP LEU GLU HIS GLN GLY THR TYR          
SEQRES   6 C   91  TRP CYS HIS VAL TYR ASN ASP ARG ASP SER GLN ASP SER          
SEQRES   7 C   91  LYS LYS VAL GLU ILE ILE ILE ASP GLU LEU ASN ASN LEU          
SEQRES   1 D   91  GLY SER LYS LEU GLN ILE CYS VAL GLU PRO THR SER GLN          
SEQRES   2 D   91  LYS LEU MET PRO GLY SER THR LEU VAL LEU GLN CYS VAL          
SEQRES   3 D   91  ALA VAL GLY SER PRO ILE PRO HIS TYR GLN TRP PHE LYS          
SEQRES   4 D   91  ASN GLU LEU PRO LEU THR HIS GLU THR LYS LYS LEU TYR          
SEQRES   5 D   91  MET VAL PRO TYR VAL ASP LEU GLU HIS GLN GLY THR TYR          
SEQRES   6 D   91  TRP CYS HIS VAL TYR ASN ASP ARG ASP SER GLN ASP SER          
SEQRES   7 D   91  LYS LYS VAL GLU ILE ILE ILE ASP GLU LEU ASN ASN LEU          
FORMUL   5  HOH   *398(H2 O)                                                    
HELIX    1   1 ASP A  281  GLN A  285  5                                   5    
HELIX    2   2 ASP B  281  GLN B  285  5                                   5    
HELIX    3   3 ASP C  281  GLN C  285  5                                   5    
HELIX    4   4 ASP D  281  GLN D  285  5                                   5    
SHEET    1   A 2 GLN A 228  VAL A 231  0                                        
SHEET    2   A 2 VAL A 249  VAL A 251 -1  O  VAL A 249   N  CYS A 230           
SHEET    1   B 5 GLN A 236  LEU A 238  0                                        
SHEET    2   B 5 VAL A 304  ILE A 308  1  O  ILE A 307   N  LEU A 238           
SHEET    3   B 5 GLY A 286  TYR A 293 -1  N  TYR A 288   O  VAL A 304           
SHEET    4   B 5 HIS A 257  LYS A 262 -1  N  HIS A 257   O  TYR A 293           
SHEET    5   B 5 LEU A 265  PRO A 266 -1  O  LEU A 265   N  LYS A 262           
SHEET    1   C 4 GLN A 236  LEU A 238  0                                        
SHEET    2   C 4 VAL A 304  ILE A 308  1  O  ILE A 307   N  LEU A 238           
SHEET    3   C 4 GLY A 286  TYR A 293 -1  N  TYR A 288   O  VAL A 304           
SHEET    4   C 4 SER A 298  ASP A 300 -1  O  GLN A 299   N  VAL A 292           
SHEET    1   D 2 LEU A 244  GLN A 247  0                                        
SHEET    2   D 2 LEU A 274  VAL A 277 -1  O  TYR A 275   N  LEU A 246           
SHEET    1   E 2 GLN B 228  VAL B 231  0                                        
SHEET    2   E 2 VAL B 249  VAL B 251 -1  O  VAL B 249   N  CYS B 230           
SHEET    1   F 5 GLN B 236  LEU B 238  0                                        
SHEET    2   F 5 VAL B 304  ILE B 308  1  O  ILE B 307   N  LEU B 238           
SHEET    3   F 5 GLY B 286  TYR B 293 -1  N  GLY B 286   O  ILE B 306           
SHEET    4   F 5 HIS B 257  LYS B 262 -1  N  PHE B 261   O  TRP B 289           
SHEET    5   F 5 LEU B 265  PRO B 266 -1  O  LEU B 265   N  LYS B 262           
SHEET    1   G 4 GLN B 236  LEU B 238  0                                        
SHEET    2   G 4 VAL B 304  ILE B 308  1  O  ILE B 307   N  LEU B 238           
SHEET    3   G 4 GLY B 286  TYR B 293 -1  N  GLY B 286   O  ILE B 306           
SHEET    4   G 4 SER B 298  ASP B 300 -1  O  GLN B 299   N  VAL B 292           
SHEET    1   H 2 LEU B 244  GLN B 247  0                                        
SHEET    2   H 2 LEU B 274  VAL B 277 -1  O  TYR B 275   N  LEU B 246           
SHEET    1   I 2 GLN C 228  VAL C 231  0                                        
SHEET    2   I 2 VAL C 249  VAL C 251 -1  O  VAL C 249   N  CYS C 230           
SHEET    1   J 5 GLN C 236  LEU C 238  0                                        
SHEET    2   J 5 VAL C 304  ILE C 308  1  O  ILE C 307   N  LEU C 238           
SHEET    3   J 5 GLY C 286  TYR C 293 -1  N  GLY C 286   O  ILE C 306           
SHEET    4   J 5 HIS C 257  LYS C 262 -1  N  HIS C 257   O  TYR C 293           
SHEET    5   J 5 LEU C 265  PRO C 266 -1  O  LEU C 265   N  LYS C 262           
SHEET    1   K 4 GLN C 236  LEU C 238  0                                        
SHEET    2   K 4 VAL C 304  ILE C 308  1  O  ILE C 307   N  LEU C 238           
SHEET    3   K 4 GLY C 286  TYR C 293 -1  N  GLY C 286   O  ILE C 306           
SHEET    4   K 4 SER C 298  ASP C 300 -1  O  GLN C 299   N  VAL C 292           
SHEET    1   L 2 LEU C 244  GLN C 247  0                                        
SHEET    2   L 2 LEU C 274  VAL C 277 -1  O  VAL C 277   N  LEU C 244           
SHEET    1   M 2 GLN D 228  VAL D 231  0                                        
SHEET    2   M 2 VAL D 249  VAL D 251 -1  O  VAL D 249   N  CYS D 230           
SHEET    1   N 5 GLN D 236  LEU D 238  0                                        
SHEET    2   N 5 VAL D 304  ILE D 308  1  O  ILE D 307   N  LEU D 238           
SHEET    3   N 5 GLY D 286  TYR D 293 -1  N  GLY D 286   O  ILE D 306           
SHEET    4   N 5 HIS D 257  LYS D 262 -1  N  PHE D 261   O  TRP D 289           
SHEET    5   N 5 LEU D 265  PRO D 266 -1  O  LEU D 265   N  LYS D 262           
SHEET    1   O 4 GLN D 236  LEU D 238  0                                        
SHEET    2   O 4 VAL D 304  ILE D 308  1  O  ILE D 307   N  LEU D 238           
SHEET    3   O 4 GLY D 286  TYR D 293 -1  N  GLY D 286   O  ILE D 306           
SHEET    4   O 4 SER D 298  ASP D 300 -1  O  GLN D 299   N  VAL D 292           
SHEET    1   P 2 LEU D 244  GLN D 247  0                                        
SHEET    2   P 2 LEU D 274  VAL D 277 -1  O  VAL D 277   N  LEU D 244           
CISPEP   1 SER A  253    PRO A  254          0         1.23                     
CISPEP   2 SER B  253    PRO B  254          0         2.85                     
CISPEP   3 SER C  253    PRO C  254          0         0.85                     
CISPEP   4 SER D  253    PRO D  254          0         1.39                     
CRYST1   39.944   43.640   49.595  66.50  90.00  90.02 P 1           4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.025035  0.000008 -0.000006        0.00000                         
SCALE2      0.000000  0.022915 -0.009965        0.00000                         
SCALE3      0.000000  0.000000  0.021987        0.00000