PDB Short entry for 3BGQ
HEADER    TRANSFERASE                             27-NOV-07   3BGQ              
TITLE     HUMAN PIM-1 KINASE IN COMPLEX WITH AN TRIAZOLO PYRIDAZINE             
TITLE    2 INHIBITOR VX2                                                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE             
COMPND   3 PIM-1;                                                               
COMPND   4 CHAIN: A;                                                            
COMPND   5 FRAGMENT: KINASE DOMAIN RESIDUES 92-404;                             
COMPND   6 EC: 2.7.11.1;                                                        
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: PIM1;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21/DE3 PLYSS;                            
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PBEV1                                     
KEYWDS    KINASE INHIBITOR PHOSPHORYLATION, ALTERNATIVE INITIATION,             
KEYWDS   2 ATP-BINDING, CYTOPLASM, MANGANESE, MEMBRANE, METAL-BINDING,          
KEYWDS   3 NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN, PROTO-ONCOGENE,         
KEYWDS   4 SERINE/THREONINE-PROTEIN KINASE, TRANSFERASE                         
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.D.JACOBS                                                            
REVDAT   3   24-FEB-09 3BGQ    1       VERSN                                    
REVDAT   2   29-APR-08 3BGQ    1       JRNL                                     
REVDAT   1   11-DEC-07 3BGQ    0                                                
JRNL        AUTH   A.C.PIERCE,M.JACOBS,C.STUVER-MOODY                           
JRNL        TITL   DOCKING STUDY YIELDS FOUR NOVEL INHIBITORS OF THE            
JRNL        TITL 2 PROTOONCOGENE PIM-1 KINASE.                                  
JRNL        REF    J.MED.CHEM.                   V.  51  1972 2008              
JRNL        REFN                   ISSN 0022-2623                               
JRNL        PMID   18290603                                                     
JRNL        DOI    10.1021/JM701248T                                            
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNX 2005                                             
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN,ACCELRYS                   
REMARK   3               : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA,            
REMARK   3               : YIP,DZAKULA)                                         
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 19.78                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 112856.898                     
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 94.8                           
REMARK   3   NUMBER OF REFLECTIONS             : 28724                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.213                           
REMARK   3   R VALUE            (WORKING SET) : 0.212                           
REMARK   3   FREE R VALUE                     : 0.230                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.900                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1416                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.006                           
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL WITH ALL DATA.                               
REMARK   3   R VALUE     (WORKING + TEST SET, NO CUTOFF) : 0.2180               
REMARK   3   R VALUE            (WORKING SET, NO CUTOFF) : 0.2170               
REMARK   3   FREE R VALUE                    (NO CUTOFF) : 0.234                
REMARK   3   FREE R VALUE TEST SET SIZE   (%, NO CUTOFF) : 5.000                
REMARK   3   FREE R VALUE TEST SET COUNT     (NO CUTOFF) : 1497                 
REMARK   3   ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL                 
REMARK   3   TOTAL NUMBER OF REFLECTIONS     (NO CUTOFF) : 30204                
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.13                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 86.00                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 4089                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2610                       
REMARK   3   BIN FREE R VALUE                    : 0.2670                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 5.20                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 225                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.018                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2221                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 26                                      
REMARK   3   SOLVENT ATOMS            : 112                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 31.70                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 1.74000                                              
REMARK   3    B22 (A**2) : 1.74000                                              
REMARK   3    B33 (A**2) : -3.48000                                             
REMARK   3    B12 (A**2) : 1.23000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.24                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.21                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.27                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.19                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.010                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.60                            
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 21.30                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.70                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.350 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 2.140 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.160 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 3.240 ; 2.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.37                                                 
REMARK   3   BSOL        : 45.94                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  3  : MISSING.DAT                                    
REMARK   3  PARAMETER FILE  4  : PARMXRAY.XPL                                   
REMARK   3  PARAMETER FILE  5  : &_1_PARAMETER_INFILE_5                         
REMARK   3  TOPOLOGY FILE  1   : &_1_TOPOLOGY_INFILE_1                          
REMARK   3  TOPOLOGY FILE  2   : &_1_TOPOLOGY_INFILE_2                          
REMARK   3  TOPOLOGY FILE  3   : &_1_TOPOLOGY_INFILE_3                          
REMARK   3  TOPOLOGY FILE  4   : &_1_TOPOLOGY_INFILE_4                          
REMARK   3  TOPOLOGY FILE  5   : &_1_TOPOLOGY_INFILE_5                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3BGQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-07.                  
REMARK 100 THE RCSB ID CODE IS RCSB045499.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 31-MAY-05                          
REMARK 200  TEMPERATURE           (KELVIN) : 110                                
REMARK 200  PH                             : 5.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ALS                                
REMARK 200  BEAMLINE                       : 5.0.1                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : D*TREK                             
REMARK 200  DATA SCALING SOFTWARE          : D*TREK                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 30223                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 19.780                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 3.580                              
REMARK 200  R MERGE                    (I) : 0.06200                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 10.1000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.07                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.80                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.36000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.300                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 58.86                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M AMMONIUM PHOSPHATE DIBASIC, 100      
REMARK 280  MM CITRATE, 200 MM NACL, PH 5.5, VAPOR DIFFUSION, HANGING           
REMARK 280  DROP, TEMPERATURE 295K                                              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+1/6                                            
REMARK 290       6555   X-Y,X,Z+5/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       54.23333            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       27.11667            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       40.67500            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       13.55833            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       67.79167            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   -19                                                      
REMARK 465     GLY A   -18                                                      
REMARK 465     SER A   -17                                                      
REMARK 465     SER A   -16                                                      
REMARK 465     HIS A   -15                                                      
REMARK 465     HIS A   -14                                                      
REMARK 465     HIS A   -13                                                      
REMARK 465     HIS A   -12                                                      
REMARK 465     HIS A   -11                                                      
REMARK 465     HIS A   -10                                                      
REMARK 465     SER A    -9                                                      
REMARK 465     SER A    -8                                                      
REMARK 465     GLY A    -7                                                      
REMARK 465     LEU A    -6                                                      
REMARK 465     VAL A    -5                                                      
REMARK 465     PRO A    -4                                                      
REMARK 465     ARG A    -3                                                      
REMARK 465     GLY A    -2                                                      
REMARK 465     SER A    -1                                                      
REMARK 465     HIS A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     LEU A     2                                                      
REMARK 465     LEU A     3                                                      
REMARK 465     SER A     4                                                      
REMARK 465     LYS A     5                                                      
REMARK 465     ILE A     6                                                      
REMARK 465     ASN A     7                                                      
REMARK 465     SER A     8                                                      
REMARK 465     LEU A     9                                                      
REMARK 465     ALA A    10                                                      
REMARK 465     HIS A    11                                                      
REMARK 465     LEU A    12                                                      
REMARK 465     ARG A    13                                                      
REMARK 465     ALA A    14                                                      
REMARK 465     ALA A    15                                                      
REMARK 465     PRO A    16                                                      
REMARK 465     CYS A    17                                                      
REMARK 465     ASN A    18                                                      
REMARK 465     ASP A    19                                                      
REMARK 465     LEU A    20                                                      
REMARK 465     HIS A    21                                                      
REMARK 465     ALA A    22                                                      
REMARK 465     THR A    23                                                      
REMARK 465     LYS A    24                                                      
REMARK 465     LEU A    25                                                      
REMARK 465     ALA A    26                                                      
REMARK 465     PRO A    27                                                      
REMARK 465     GLY A    28                                                      
REMARK 465     LYS A    29                                                      
REMARK 465     GLU A    30                                                      
REMARK 465     LYS A    31                                                      
REMARK 465     GLU A    32                                                      
REMARK 465     SER A   306                                                      
REMARK 465     LEU A   307                                                      
REMARK 465     SER A   308                                                      
REMARK 465     PRO A   309                                                      
REMARK 465     GLY A   310                                                      
REMARK 465     PRO A   311                                                      
REMARK 465     SER A   312                                                      
REMARK 465     LYS A   313                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER;            
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A  79    CG   CD   OE1  OE2                                  
REMARK 470     ASN A  82    CG   OD1  ND2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASN A  82      -93.73    -60.30                                   
REMARK 500    VAL A  96       47.80    -92.57                                   
REMARK 500    SER A  98      152.77    127.95                                   
REMARK 500    ASP A 167       40.42   -149.13                                   
REMARK 500    ASP A 186       80.34     56.92                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VX2 A 314                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3BGP   RELATED DB: PDB                                   
REMARK 900 SAME PROTEIN COMPLEXED WITHG INHIBITOR VX1                           
REMARK 900 RELATED ID: 3BGZ   RELATED DB: PDB                                   
REMARK 900 SAME PROTEIN COMPLEXED WITHG INHIBITOR VX3                           
DBREF  3BGQ A    1   313  UNP    P11309   PIM1_HUMAN      92    404             
SEQADV 3BGQ MET A  -19  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ GLY A  -18  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ SER A  -17  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ SER A  -16  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A  -15  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A  -14  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A  -13  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A  -12  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A  -11  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A  -10  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ SER A   -9  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ SER A   -8  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ GLY A   -7  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ LEU A   -6  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ VAL A   -5  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ PRO A   -4  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ ARG A   -3  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ GLY A   -2  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ SER A   -1  UNP  P11309              EXPRESSION TAG                 
SEQADV 3BGQ HIS A    0  UNP  P11309              EXPRESSION TAG                 
SEQRES   1 A  333  MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY          
SEQRES   2 A  333  LEU VAL PRO ARG GLY SER HIS MET LEU LEU SER LYS ILE          
SEQRES   3 A  333  ASN SER LEU ALA HIS LEU ARG ALA ALA PRO CYS ASN ASP          
SEQRES   4 A  333  LEU HIS ALA THR LYS LEU ALA PRO GLY LYS GLU LYS GLU          
SEQRES   5 A  333  PRO LEU GLU SER GLN TYR GLN VAL GLY PRO LEU LEU GLY          
SEQRES   6 A  333  SER GLY GLY PHE GLY SER VAL TYR SER GLY ILE ARG VAL          
SEQRES   7 A  333  SER ASP ASN LEU PRO VAL ALA ILE LYS HIS VAL GLU LYS          
SEQRES   8 A  333  ASP ARG ILE SER ASP TRP GLY GLU LEU PRO ASN GLY THR          
SEQRES   9 A  333  ARG VAL PRO MET GLU VAL VAL LEU LEU LYS LYS VAL SER          
SEQRES  10 A  333  SER GLY PHE SER GLY VAL ILE ARG LEU LEU ASP TRP PHE          
SEQRES  11 A  333  GLU ARG PRO ASP SER PHE VAL LEU ILE LEU GLU ARG PRO          
SEQRES  12 A  333  GLU PRO VAL GLN ASP LEU PHE ASP PHE ILE THR GLU ARG          
SEQRES  13 A  333  GLY ALA LEU GLN GLU GLU LEU ALA ARG SER PHE PHE TRP          
SEQRES  14 A  333  GLN VAL LEU GLU ALA VAL ARG HIS CYS HIS ASN CYS GLY          
SEQRES  15 A  333  VAL LEU HIS ARG ASP ILE LYS ASP GLU ASN ILE LEU ILE          
SEQRES  16 A  333  ASP LEU ASN ARG GLY GLU LEU LYS LEU ILE ASP PHE GLY          
SEQRES  17 A  333  SER GLY ALA LEU LEU LYS ASP THR VAL TYR THR ASP PHE          
SEQRES  18 A  333  ASP GLY THR ARG VAL TYR SER PRO PRO GLU TRP ILE ARG          
SEQRES  19 A  333  TYR HIS ARG TYR HIS GLY ARG SER ALA ALA VAL TRP SER          
SEQRES  20 A  333  LEU GLY ILE LEU LEU TYR ASP MET VAL CYS GLY ASP ILE          
SEQRES  21 A  333  PRO PHE GLU HIS ASP GLU GLU ILE ILE ARG GLY GLN VAL          
SEQRES  22 A  333  PHE PHE ARG GLN ARG VAL SER SEP GLU CYS GLN HIS LEU          
SEQRES  23 A  333  ILE ARG TRP CYS LEU ALA LEU ARG PRO SER ASP ARG PRO          
SEQRES  24 A  333  THR PHE GLU GLU ILE GLN ASN HIS PRO TRP MET GLN ASP          
SEQRES  25 A  333  VAL LEU LEU PRO GLN GLU THR ALA GLU ILE HIS LEU HIS          
SEQRES  26 A  333  SER LEU SER PRO GLY PRO SER LYS                              
MODRES 3BGQ SEP A  261  SER  PHOSPHOSERINE                                      
HET    SEP  A 261      10                                                       
HET    VX2  A 314      26                                                       
HETNAM     SEP PHOSPHOSERINE                                                    
HETNAM     VX2 N-CYCLOHEXYL-3-[3-(TRIFLUOROMETHYL)PHENYL][1,2,                  
HETNAM   2 VX2  4]TRIAZOLO[4,3-B]PYRIDAZIN-6-AMINE                              
HETSYN     SEP PHOSPHONOSERINE                                                  
FORMUL   1  SEP    C3 H8 N O6 P                                                 
FORMUL   2  VX2    C18 H18 F3 N5                                                
FORMUL   3  HOH   *112(H2 O)                                                    
HELIX    1   1 PRO A   33  GLN A   37  1                                   5    
HELIX    2   2 ASP A   72  ILE A   74  5                                   3    
HELIX    3   3 MET A   88  VAL A   96  1                                   9    
HELIX    4   4 LEU A  129  GLY A  137  1                                   9    
HELIX    5   5 GLN A  140  CYS A  161  1                                  22    
HELIX    6   6 LYS A  169  GLU A  171  5                                   3    
HELIX    7   7 THR A  204  SER A  208  5                                   5    
HELIX    8   8 PRO A  209  HIS A  216  1                                   8    
HELIX    9   9 HIS A  219  GLY A  238  1                                  20    
HELIX   10  10 HIS A  244  GLY A  251  1                                   8    
HELIX   11  11 SER A  260  LEU A  271  1                                  12    
HELIX   12  12 ARG A  274  ARG A  278  5                                   5    
HELIX   13  13 THR A  280  ASN A  286  1                                   7    
HELIX   14  14 HIS A  287  GLN A  291  5                                   5    
HELIX   15  15 LEU A  295  LEU A  304  1                                  10    
SHEET    1   A 5 TYR A  38  GLY A  47  0                                        
SHEET    2   A 5 GLY A  50  ARG A  57 -1  O  VAL A  52   N  GLY A  45           
SHEET    3   A 5 PRO A  63  GLU A  70 -1  O  ILE A  66   N  TYR A  53           
SHEET    4   A 5 SER A 115  GLU A 121 -1  O  LEU A 118   N  LYS A  67           
SHEET    5   A 5 LEU A 106  GLU A 111 -1  N  ASP A 108   O  ILE A 119           
SHEET    1   B 2 TRP A  77  GLU A  79  0                                        
SHEET    2   B 2 ARG A  85  PRO A  87 -1  O  VAL A  86   N  GLY A  78           
SHEET    1   C 3 VAL A 126  ASP A 128  0                                        
SHEET    2   C 3 ILE A 173  ASP A 176 -1  O  ILE A 175   N  GLN A 127           
SHEET    3   C 3 GLU A 181  LEU A 184 -1  O  LYS A 183   N  LEU A 174           
SHEET    1   D 2 VAL A 163  LEU A 164  0                                        
SHEET    2   D 2 ALA A 191  LEU A 192 -1  O  ALA A 191   N  LEU A 164           
LINK         C   SER A 260                 N   SEP A 261     1555   1555  1.33  
LINK         C   SEP A 261                 N   GLU A 262     1555   1555  1.33  
CISPEP   1 GLU A  124    PRO A  125          0         0.04                     
SITE     1 AC1 11 LEU A  44  PHE A  49  ALA A  65  LYS A  67                    
SITE     2 AC1 11 ILE A 104  GLU A 121  ARG A 122  ASP A 128                    
SITE     3 AC1 11 LEU A 174  ASP A 186  HOH A 334                               
CRYST1   98.340   98.340   81.350  90.00  90.00 120.00 P 65          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010169  0.005871  0.000000        0.00000                         
SCALE2      0.000000  0.011742  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.012293        0.00000