PDB Short entry for 3BNF HEADER OXIDOREDUCTASE 14-DEC-07 3BNF TITLE W. SUCCINOGENES NRFA SULFITE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C-552; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AMMONIA-FORMING CYTOCHROME C NITRITE REDUCTASE, CYTOCHROME C COMPND 5 NITRITE REDUCTASE; COMPND 6 EC: 1.7.2.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WOLINELLA SUCCINOGENES; SOURCE 3 ORGANISM_TAXID: 844 KEYWDS C-TYPE CYTOCHROME, NITRITE REDUCTASE, SULFITE COMPLEX, CALCIUM, KEYWDS 2 ELECTRON TRANSPORT, HEME, IRON, METAL-BINDING, OXIDOREDUCTASE, KEYWDS 3 PERIPLASM, TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR P.LUKAT,O.EINSLE REVDAT 3 01-NOV-23 3BNF 1 REMARK LINK REVDAT 2 24-FEB-09 3BNF 1 VERSN REVDAT 1 26-FEB-08 3BNF 0 JRNL AUTH P.LUKAT,M.RUDOLF,P.STACH,A.MESSERSCHMIDT,P.M.H.KRONECK, JRNL AUTH 2 J.SIMON,O.EINSLE JRNL TITL BINDING AND REDUCTION OF SULFITE BY CYTOCHROME C NITRITE JRNL TITL 2 REDUCTASE JRNL REF BIOCHEMISTRY V. 47 2080 2008 JRNL REFN ISSN 0006-2960 JRNL PMID 18201106 JRNL DOI 10.1021/BI7021415 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 68471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3660 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4875 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.3260 REMARK 3 BIN FREE R VALUE SET COUNT : 272 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3772 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 231 REMARK 3 SOLVENT ATOMS : 639 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.124 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.125 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4157 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5672 ; 1.778 ; 2.109 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 480 ; 6.903 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;36.592 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 707 ;15.451 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;19.732 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 542 ; 0.136 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3193 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2567 ; 0.263 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2800 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 571 ; 0.206 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.054 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 65 ; 0.256 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.194 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.038 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2455 ; 1.068 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3809 ; 1.556 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2021 ; 2.550 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1853 ; 3.546 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BNF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045731. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0600 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73146 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1FS7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULFATE, YTTRIUM REMARK 280 CHLORIDE, ACETATE BUFFER, PH 5.7, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 59.75000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.33700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.66850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 59.75000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 140.00550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.00550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.75000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.66850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 59.75000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 93.33700 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 59.75000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 93.33700 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 59.75000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 140.00550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 46.66850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 59.75000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 46.66850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 140.00550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 59.75000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 59.75000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 93.33700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17990 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 119.50000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 Y Y1 A 4 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 901 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 977 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1033 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 ASN A 24 REMARK 465 ILE A 25 REMARK 465 ASN A 26 REMARK 465 GLU A 27 REMARK 465 ARG A 28 REMARK 465 GLU A 29 REMARK 465 LYS A 30 REMARK 465 GLU A 31 REMARK 465 ARG A 32 REMARK 465 VAL A 33 REMARK 465 ALA A 34 REMARK 465 LEU A 35 REMARK 465 ASN A 36 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 226 CG CD CE NZ REMARK 480 LYS A 229 CD CE NZ REMARK 480 ARG A 331 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS A 336 CG CD CE NZ REMARK 480 LYS A 342 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 295 CAB HEM A 511 1.79 REMARK 500 O HOH A 560 O HOH A 1098 1.80 REMARK 500 SG CYS A 211 CAB HEM A 510 1.81 REMARK 500 SG CYS A 130 CAB HEM A 508 1.84 REMARK 500 SG CYS A 168 CAB HEM A 509 1.93 REMARK 500 SG CYS A 326 CAB HEM A 512 1.94 REMARK 500 SG CYS A 171 CAC HEM A 509 1.96 REMARK 500 NE2 HIS A 203 O2D HEM A 509 1.98 REMARK 500 O HOH A 593 O HOH A 1148 1.98 REMARK 500 OE1 GLU A 497 N LYS A 507 2.00 REMARK 500 O HOH A 591 O HOH A 1148 2.05 REMARK 500 SG CYS A 133 CAC HEM A 508 2.09 REMARK 500 O HOH A 732 O HOH A 903 2.10 REMARK 500 O HOH A 589 O HOH A 892 2.10 REMARK 500 O HOH A 575 O HOH A 687 2.11 REMARK 500 O HOH A 688 O HOH A 1108 2.13 REMARK 500 O HOH A 840 O HOH A 1131 2.13 REMARK 500 SG CYS A 214 CAC HEM A 510 2.14 REMARK 500 OD1 ASN A 488 O HOH A 917 2.16 REMARK 500 SG CYS A 298 CAC HEM A 511 2.16 REMARK 500 O THR A 285 O HOH A 1120 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 634 O HOH A 850 10565 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 229 CG LYS A 229 CD 0.445 REMARK 500 ARG A 331 CA ARG A 331 CB -0.298 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 120 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 LYS A 226 CA - CB - CG ANGL. DEV. = 17.0 DEGREES REMARK 500 LYS A 229 CB - CG - CD ANGL. DEV. = -35.3 DEGREES REMARK 500 THR A 285 N - CA - CB ANGL. DEV. = 13.0 DEGREES REMARK 500 ARG A 331 CB - CA - C ANGL. DEV. = -15.9 DEGREES REMARK 500 ARG A 331 N - CA - CB ANGL. DEV. = 12.6 DEGREES REMARK 500 LYS A 336 CA - CB - CG ANGL. DEV. = -21.6 DEGREES REMARK 500 LYS A 336 CB - CG - CD ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 100 -157.92 -125.34 REMARK 500 ASP A 120 -176.99 -172.35 REMARK 500 ILE A 166 108.25 -15.49 REMARK 500 ILE A 166 117.20 -29.09 REMARK 500 HIS A 277 67.90 28.48 REMARK 500 THR A 285 -74.57 84.68 REMARK 500 ASN A 321 44.64 -148.50 REMARK 500 GLU A 332 170.73 76.76 REMARK 500 ALA A 406 67.21 -150.70 REMARK 500 PHE A 445 47.03 -147.47 REMARK 500 THR A 472 -82.64 -121.97 REMARK 500 THR A 505 -7.88 113.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 284 THR A 285 46.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 508 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SO3 A 1 S REMARK 620 2 HEM A 508 NA 87.7 REMARK 620 3 HEM A 508 NB 90.6 93.8 REMARK 620 4 HEM A 508 NC 93.8 177.3 88.3 REMARK 620 5 HEM A 508 ND 91.9 88.2 176.8 89.5 REMARK 620 6 LYS A 134 NZ 175.6 96.5 90.6 82.0 86.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 510 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 102 NE2 REMARK 620 2 HEM A 510 NA 86.3 REMARK 620 3 HEM A 510 NB 92.4 88.2 REMARK 620 4 HEM A 510 NC 92.0 177.1 89.5 REMARK 620 5 HEM A 510 ND 86.3 87.4 175.5 94.9 REMARK 620 6 HIS A 215 NE2 177.8 92.4 89.3 89.4 91.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 509 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 172 NE2 REMARK 620 2 HEM A 509 NA 88.8 REMARK 620 3 HEM A 509 NB 92.3 93.0 REMARK 620 4 HEM A 509 NC 92.6 178.0 88.5 REMARK 620 5 HEM A 509 ND 85.1 90.9 175.3 87.7 REMARK 620 6 HIS A 313 NE2 177.7 91.6 89.9 87.0 92.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 513 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 217 OE1 REMARK 620 2 GLU A 217 OE2 52.7 REMARK 620 3 TYR A 218 O 85.1 84.6 REMARK 620 4 LYS A 274 O 93.0 95.3 177.6 REMARK 620 5 GLN A 276 OE1 72.9 125.5 87.7 90.4 REMARK 620 6 HOH A 590 O 132.7 80.2 95.3 87.1 154.3 REMARK 620 7 HOH A 706 O 153.8 145.6 80.4 100.9 84.8 70.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 512 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 288 NE2 REMARK 620 2 HEM A 512 NA 92.7 REMARK 620 3 HEM A 512 NB 99.8 88.3 REMARK 620 4 HEM A 512 NC 93.6 173.6 89.6 REMARK 620 5 HEM A 512 ND 85.6 91.8 174.6 89.8 REMARK 620 6 HIS A 330 NE2 175.1 85.2 75.7 88.4 98.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 511 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 299 NE2 REMARK 620 2 HEM A 511 NA 92.3 REMARK 620 3 HEM A 511 NB 86.5 88.7 REMARK 620 4 HEM A 511 NC 90.1 176.7 89.1 REMARK 620 5 HEM A 511 ND 92.5 89.5 178.0 92.7 REMARK 620 6 HIS A 405 NE2 174.1 89.5 88.0 87.9 93.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO3 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y1 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y1 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y1 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 512 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FS7 RELATED DB: PDB REMARK 900 RELATED ID: 3BNG RELATED DB: PDB REMARK 900 RELATED ID: 3BNH RELATED DB: PDB REMARK 900 RELATED ID: 3BNJ RELATED DB: PDB DBREF 3BNF A 23 507 UNP Q9S1E5 NRFA_WOLSU 23 507 SEQRES 1 A 485 SER ASN ILE ASN GLU ARG GLU LYS GLU ARG VAL ALA LEU SEQRES 2 A 485 ASN LYS THR ALA HIS SER GLN GLY ILE GLU GLY LYS ALA SEQRES 3 A 485 MET SER GLU GLU TRP ALA ARG TYR TYR PRO ARG GLN PHE SEQRES 4 A 485 ASP SER TRP LYS LYS THR LYS GLU SER ASP ASN ILE THR SEQRES 5 A 485 ASP MET LEU LYS GLU LYS PRO ALA LEU VAL VAL ALA TRP SEQRES 6 A 485 ALA GLY TYR PRO PHE SER LYS ASP TYR ASN ALA PRO ARG SEQRES 7 A 485 GLY HIS TYR TYR ALA LEU GLN ASP ASN ILE ASN THR LEU SEQRES 8 A 485 ARG THR GLY ALA PRO VAL ASP GLY LYS THR GLY PRO LEU SEQRES 9 A 485 PRO SER ALA CYS TRP THR CYS LYS SER PRO ASP VAL PRO SEQRES 10 A 485 ARG ILE ILE GLU GLN ASP GLY GLU LEU GLU TYR PHE THR SEQRES 11 A 485 GLY LYS TRP ALA LYS TYR GLY ASP GLU ILE VAL ASN THR SEQRES 12 A 485 ILE GLY CYS TYR ASN CYS HIS ASP ASP LYS SER ALA GLU SEQRES 13 A 485 LEU LYS SER LYS VAL PRO TYR LEU ASP ARG GLY LEU SER SEQRES 14 A 485 ALA ALA GLY PHE LYS THR PHE ALA GLU SER THR HIS GLN SEQRES 15 A 485 GLU LYS ARG SER LEU VAL CYS ALA GLN CYS HIS VAL GLU SEQRES 16 A 485 TYR TYR PHE LYS LYS THR GLU TRP LYS ASP ASP LYS GLY SEQRES 17 A 485 VAL ASP LYS THR ALA MET VAL VAL THR LEU PRO TRP SER SEQRES 18 A 485 LYS GLY ILE SER THR GLU GLN MET GLU ALA TYR TYR ASP SEQRES 19 A 485 GLU ILE ASN PHE ALA ASP TRP THR HIS GLY ILE SER LYS SEQRES 20 A 485 THR PRO MET LEU LYS ALA GLN HIS PRO ASP TRP GLU LEU SEQRES 21 A 485 TYR LYS THR GLY ILE HIS GLY GLN LYS GLY VAL SER CYS SEQRES 22 A 485 ALA ASP CYS HIS MET PRO TYR THR GLN GLU GLY ALA VAL SEQRES 23 A 485 LYS TYR SER ASP HIS LYS VAL GLY ASN PRO LEU ASP ASN SEQRES 24 A 485 MET ASP LYS SER CYS MET ASN CYS HIS ARG GLU SER GLU SEQRES 25 A 485 GLN LYS LEU LYS ASP ILE VAL LYS GLN LYS PHE GLU ARG SEQRES 26 A 485 LYS GLU PHE LEU GLN ASP ILE ALA PHE ASP ASN ILE GLY SEQRES 27 A 485 LYS ALA HIS LEU GLU THR GLY LYS ALA MET GLU LEU GLY SEQRES 28 A 485 ALA THR ASP ALA GLU LEU LYS GLU ILE ARG THR HIS ILE SEQRES 29 A 485 ARG HIS ALA GLN TRP ARG ALA ASP MET ALA ILE ALA GLY SEQRES 30 A 485 HIS GLY SER PHE PHE HIS ALA PRO GLU GLU VAL LEU ARG SEQRES 31 A 485 LEU LEU ALA SER GLY ASN GLU GLU ALA GLN LYS ALA ARG SEQRES 32 A 485 ILE LYS LEU VAL LYS VAL LEU ALA LYS TYR GLY ALA ILE SEQRES 33 A 485 ASP TYR VAL ALA PRO ASP PHE GLU THR LYS GLU LYS ALA SEQRES 34 A 485 GLN LYS LEU ALA LYS VAL ASP MET GLU ALA PHE ILE ALA SEQRES 35 A 485 GLU LYS LEU LYS PHE LYS GLN THR LEU GLU GLN GLU TRP SEQRES 36 A 485 LYS LYS GLN ALA ILE ALA LYS GLY ARG LEU ASN PRO GLU SEQRES 37 A 485 SER LEU LYS GLY VAL ASP GLU LYS SER SER TYR TYR ASP SEQRES 38 A 485 LYS THR LYS LYS HET CA A 513 1 HET SO3 A 1 4 HET Y1 A 2 1 HET Y1 A 3 1 HET Y1 A 4 1 HET ACT A 5 4 HET ACT A 6 4 HET HEM A 508 43 HET HEM A 509 43 HET HEM A 510 43 HET HEM A 511 43 HET HEM A 512 43 HETNAM CA CALCIUM ION HETNAM SO3 SULFITE ION HETNAM Y1 YTTRIUM ION HETNAM ACT ACETATE ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 CA CA 2+ FORMUL 3 SO3 O3 S 2- FORMUL 4 Y1 3(Y 2+) FORMUL 7 ACT 2(C2 H3 O2 1-) FORMUL 9 HEM 5(C34 H32 FE N4 O4) FORMUL 14 HOH *639(H2 O) HELIX 1 1 MET A 49 ALA A 54 5 6 HELIX 2 2 TYR A 57 LYS A 66 1 10 HELIX 3 3 THR A 67 SER A 70 5 4 HELIX 4 4 ASP A 75 LYS A 80 1 6 HELIX 5 5 PRO A 81 TRP A 87 1 7 HELIX 6 6 TYR A 90 LYS A 94 5 5 HELIX 7 7 GLY A 101 TYR A 103 5 3 HELIX 8 8 TYR A 104 THR A 112 1 9 HELIX 9 9 LEU A 113 GLY A 116 5 4 HELIX 10 10 PRO A 127 THR A 132 5 6 HELIX 11 11 PRO A 136 GLY A 146 1 11 HELIX 12 12 GLY A 146 PHE A 151 1 6 HELIX 13 13 LYS A 154 GLY A 159 5 6 HELIX 14 14 GLY A 167 CYS A 171 5 5 HELIX 15 15 VAL A 183 ALA A 193 1 11 HELIX 16 16 THR A 202 GLN A 213 1 12 HELIX 17 17 SER A 247 ILE A 258 1 12 HELIX 18 18 PRO A 278 LYS A 284 1 7 HELIX 19 19 GLY A 286 LYS A 291 1 6 HELIX 20 20 SER A 294 MET A 300 1 7 HELIX 21 21 ASN A 317 ASP A 320 5 4 HELIX 22 22 ASN A 321 CYS A 326 1 6 HELIX 23 23 SER A 333 GLY A 373 1 41 HELIX 24 24 THR A 375 ALA A 398 1 24 HELIX 25 25 GLY A 401 ALA A 406 1 6 HELIX 26 26 ALA A 406 TYR A 435 1 30 HELIX 27 27 THR A 447 ALA A 455 1 9 HELIX 28 28 ASP A 458 THR A 472 1 15 HELIX 29 29 THR A 472 LYS A 484 1 13 HELIX 30 30 ASN A 488 LYS A 493 5 6 SHEET 1 A 2 TYR A 219 LYS A 226 0 SHEET 2 A 2 ASP A 232 THR A 239 -1 O ALA A 235 N THR A 223 SHEET 1 B 2 TRP A 263 THR A 264 0 SHEET 2 B 2 PRO A 271 MET A 272 -1 O MET A 272 N TRP A 263 SHEET 1 C 2 TYR A 302 GLU A 305 0 SHEET 2 C 2 VAL A 308 SER A 311 -1 O TYR A 310 N THR A 303 LINK S SO3 A 1 FE HEM A 508 1555 1555 2.28 LINK NE2 HIS A 102 FE HEM A 510 1555 1555 2.13 LINK NZ LYS A 134 FE HEM A 508 1555 1555 1.96 LINK NE2 HIS A 172 FE HEM A 509 1555 1555 1.90 LINK NE2 HIS A 215 FE HEM A 510 1555 1555 1.94 LINK OE1 GLU A 217 CA CA A 513 1555 1555 2.43 LINK OE2 GLU A 217 CA CA A 513 1555 1555 2.57 LINK O TYR A 218 CA CA A 513 1555 1555 2.49 LINK O LYS A 274 CA CA A 513 1555 1555 2.33 LINK OE1 GLN A 276 CA CA A 513 1555 1555 2.44 LINK NE2 HIS A 288 FE HEM A 512 1555 1555 1.94 LINK NE2 HIS A 299 FE HEM A 511 1555 1555 1.94 LINK NE2 HIS A 313 FE HEM A 509 1555 1555 1.92 LINK NE2 HIS A 330 FE HEM A 512 1555 1555 2.14 LINK NE2 HIS A 405 FE HEM A 511 1555 1555 1.98 LINK CA CA A 513 O HOH A 590 1555 1555 2.43 LINK CA CA A 513 O HOH A 706 1555 1555 2.47 SITE 1 AC1 6 GLU A 217 TYR A 218 LYS A 274 GLN A 276 SITE 2 AC1 6 HOH A 590 HOH A 706 SITE 1 AC2 6 PHE A 92 ARG A 114 TYR A 218 HIS A 277 SITE 2 AC2 6 HOH A 559 HOH A1042 SITE 1 AC3 7 GLU A 52 ASP A 444 HOH A 659 HOH A 776 SITE 2 AC3 7 HOH A 777 HOH A 778 HOH A 781 SITE 1 AC4 3 PRO A 99 HOH A 784 HOH A1069 SITE 1 AC5 1 GLU A 408 SITE 1 AC6 5 GLY A 286 ILE A 287 PRO A 407 GLU A 408 SITE 2 AC6 5 HOH A 827 SITE 1 AC7 8 GLY A 43 ILE A 44 GLU A 45 TYR A 56 SITE 2 AC7 8 HOH A 659 HOH A 776 HOH A 781 HOH A 813 SITE 1 AC8 23 TYR A 96 ASN A 97 ASP A 108 ASN A 109 SITE 2 AC8 23 THR A 112 ARG A 114 THR A 115 LEU A 126 SITE 3 AC8 23 CYS A 130 CYS A 133 LYS A 134 CYS A 214 SITE 4 AC8 23 HIS A 215 TYR A 218 HIS A 277 ALA A 398 SITE 5 AC8 23 HIS A 400 HOH A 538 HOH A 541 HOH A 559 SITE 6 AC8 23 HOH A 561 HOH A 565 HOH A 607 SITE 1 AC9 17 TYR A 57 GLN A 60 TRP A 64 GLY A 167 SITE 2 AC9 17 CYS A 168 CYS A 171 HIS A 172 LEU A 179 SITE 3 AC9 17 HIS A 203 ARG A 207 MET A 300 TYR A 302 SITE 4 AC9 17 TYR A 310 SER A 311 HIS A 313 HOH A 809 SITE 5 AC9 17 HOH A 823 SITE 1 BC1 18 SER A 70 PRO A 99 ARG A 100 GLY A 101 SITE 2 BC1 18 HIS A 102 TYR A 104 ALA A 105 ASP A 108 SITE 3 BC1 18 CYS A 133 LYS A 134 ILE A 166 CYS A 211 SITE 4 BC1 18 CYS A 214 HIS A 215 HIS A 299 GLY A 316 SITE 5 BC1 18 HOH A 536 HOH A 537 SITE 1 BC2 16 PRO A 99 HIS A 215 TYR A 283 HIS A 288 SITE 2 BC2 16 SER A 294 CYS A 295 CYS A 298 HIS A 299 SITE 3 BC2 16 ASN A 317 PRO A 318 HIS A 400 GLY A 401 SITE 4 BC2 16 PHE A 404 HIS A 405 HOH A1069 HOH A1082 SITE 1 BC3 13 ILE A 287 HIS A 288 LYS A 291 PRO A 318 SITE 2 BC3 13 SER A 325 CYS A 326 CYS A 329 HIS A 330 SITE 3 BC3 13 LYS A 344 PHE A 404 GLU A 408 HOH A 718 SITE 4 BC3 13 HOH A 894 CRYST1 119.500 119.500 186.674 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008368 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005357 0.00000