PDB Short entry for 3BT2 HEADER IMMUNE SYSTEM 27-DEC-07 3BT2 TITLE STRUCTURE OF UROKINASE RECEPTOR, UROKINASE AND VITRONECTIN COMPLEX CAVEAT 3BT2 LYS B 40 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROKINASE-TYPE PLASMINOGEN ACTIVATOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UROKINASE AMINO TERMINAL FRAGMENT, UROKINASE-TYPE COMPND 5 PLASMINOGEN ACTIVATOR LONG CHAIN A, UNP RESIDUES 21-153; COMPND 6 SYNONYM: UPA, U-PLASMINOGEN ACTIVATOR; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: VITRONECTIN; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: SOMETOMEDIN-B DOMAIN; COMPND 12 SYNONYM: SERUM-SPREADING FACTOR, S-PROTEIN, V75; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: ANTI-UPAR ANTIBODY, LIGHT CHAIN; COMPND 16 CHAIN: L; COMPND 17 FRAGMENT: FAB FRAGMENT, LIGHT CHAIN; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: ANTI-UPAR ANTIBODY, HEAVY CHAIN; COMPND 21 CHAIN: H; COMPND 22 FRAGMENT: FAB FRAGMENT, HEAVY CHAIN; COMPND 23 ENGINEERED: YES; COMPND 24 MOL_ID: 5; COMPND 25 MOLECULE: UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR; COMPND 26 CHAIN: U; COMPND 27 SYNONYM: UPAR, U-PAR, MONOCYTE ACTIVATION ANTIGEN MO3, CD87 ANTIGEN; COMPND 28 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLAU; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT/BIP; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: VTN; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 22 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 23 ORGANISM_TAXID: 10090; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 MOL_ID: 4; SOURCE 27 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 28 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 29 ORGANISM_TAXID: 10090; SOURCE 30 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 32 MOL_ID: 5; SOURCE 33 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 34 ORGANISM_COMMON: HUMAN; SOURCE 35 ORGANISM_TAXID: 9606; SOURCE 36 GENE: PLAUR, MO3, UPAR; SOURCE 37 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 38 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 39 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 40 EXPRESSION_SYSTEM_STRAIN: S2 CELLS; SOURCE 41 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 42 EXPRESSION_SYSTEM_PLASMID: PMT/BIP KEYWDS PROTEIN-PROTEIN INTERACTION, GLYCOPROTEIN, GPI-ANCHOR, LIPOPROTEIN, KEYWDS 2 MEMBRANE, RECEPTOR, SECRETED, BLOOD COAGULATION, EGF-LIKE DOMAIN, KEYWDS 3 FIBRINOLYSIS, HYDROLASE, KRINGLE, PHOSPHOPROTEIN, PLASMINOGEN KEYWDS 4 ACTIVATION, PROTEASE, SERINE PROTEASE, ZYMOGEN, CELL ADHESION, KEYWDS 5 HEPARIN-BINDING, SULFATION, IMMUNOGLOBULIN DOMAIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.HUANG REVDAT 6 01-NOV-23 3BT2 1 HETSYN REVDAT 5 29-JUL-20 3BT2 1 CAVEAT COMPND REMARK DBREF REVDAT 5 2 1 SEQADV HETNAM LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 13-JUL-11 3BT2 1 VERSN REVDAT 3 24-FEB-09 3BT2 1 VERSN REVDAT 2 22-APR-08 3BT2 1 JRNL REVDAT 1 25-MAR-08 3BT2 0 JRNL AUTH Q.HUAI,A.ZHOU,L.LIN,A.P.MAZAR,G.C.PARRY,J.CALLAHAN,D.E.SHAW, JRNL AUTH 2 B.FURIE,B.C.FURIE,M.HUANG JRNL TITL CRYSTAL STRUCTURES OF TWO HUMAN VITRONECTIN, UROKINASE AND JRNL TITL 2 UROKINASE RECEPTOR COMPLEXES JRNL REF NAT.STRUCT.MOL.BIOL. V. 15 422 2008 JRNL REFN ISSN 1545-9993 JRNL PMID 18376415 JRNL DOI 10.1038/NSMB.1404 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 37032 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1191 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2593 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6527 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 42.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : 1.50000 REMARK 3 B33 (A**2) : -1.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.70000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.463 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.292 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.316 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.105 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.878 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6782 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4587 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9213 ; 1.740 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11097 ; 1.110 ; 3.010 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 835 ; 7.848 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 293 ;37.001 ;24.403 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1097 ;18.315 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;19.280 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1003 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7496 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1321 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1296 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4541 ; 0.213 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3036 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3667 ; 0.096 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 181 ; 0.236 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.417 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.135 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.184 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.121 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5317 ; 1.039 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1721 ; 0.166 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6778 ; 1.264 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3050 ; 2.001 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2435 ; 2.926 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 41 REMARK 3 ORIGIN FOR THE GROUP (A): 54.0350 -46.9060 42.1430 REMARK 3 T TENSOR REMARK 3 T11: 0.4389 T22: 0.8800 REMARK 3 T33: 0.2227 T12: 0.1835 REMARK 3 T13: -0.0199 T23: -0.1026 REMARK 3 L TENSOR REMARK 3 L11: 15.7256 L22: 26.5061 REMARK 3 L33: 7.8644 L12: -0.4411 REMARK 3 L13: -4.6959 L23: -3.4339 REMARK 3 S TENSOR REMARK 3 S11: -0.7767 S12: 1.8843 S13: -0.7720 REMARK 3 S21: -1.9615 S22: 0.3062 S23: -3.7408 REMARK 3 S31: 2.5648 S32: 1.0052 S33: 0.4705 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): 51.2840 -40.5410 78.7630 REMARK 3 T TENSOR REMARK 3 T11: 0.0711 T22: 0.0780 REMARK 3 T33: -0.2841 T12: -0.0007 REMARK 3 T13: -0.0029 T23: 0.4202 REMARK 3 L TENSOR REMARK 3 L11: 9.8112 L22: 8.7012 REMARK 3 L33: 4.6745 L12: -1.2009 REMARK 3 L13: -1.6517 L23: 5.1144 REMARK 3 S TENSOR REMARK 3 S11: 0.5181 S12: 0.2417 S13: 0.8900 REMARK 3 S21: -0.3670 S22: -0.3248 S23: -1.2106 REMARK 3 S31: -0.6866 S32: 0.8789 S33: -0.1934 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : U 1 U 80 REMARK 3 RESIDUE RANGE : A 9 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): 32.4850 -38.1400 60.3870 REMARK 3 T TENSOR REMARK 3 T11: -0.0382 T22: -0.1934 REMARK 3 T33: -0.5517 T12: 0.0749 REMARK 3 T13: -0.1130 T23: 0.2814 REMARK 3 L TENSOR REMARK 3 L11: 6.1447 L22: 5.9408 REMARK 3 L33: 6.0103 L12: 2.0134 REMARK 3 L13: 0.3447 L23: -2.6643 REMARK 3 S TENSOR REMARK 3 S11: -0.0910 S12: -0.1513 S13: -0.1966 REMARK 3 S21: 0.1904 S22: 0.0273 S23: -0.0426 REMARK 3 S31: -0.0607 S32: 0.2014 S33: 0.0637 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 212 REMARK 3 RESIDUE RANGE : H 1 H 208 REMARK 3 RESIDUE RANGE : U 87 U 185 REMARK 3 RESIDUE RANGE : U 186 U 275 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8100 -7.0670 18.9510 REMARK 3 T TENSOR REMARK 3 T11: -0.4237 T22: -0.3873 REMARK 3 T33: -0.4443 T12: -0.0247 REMARK 3 T13: 0.0117 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 0.7195 L22: 1.7667 REMARK 3 L33: 2.1140 L12: 0.0287 REMARK 3 L13: 0.3308 L23: -1.4249 REMARK 3 S TENSOR REMARK 3 S11: 0.0931 S12: -0.0707 S13: 0.1554 REMARK 3 S21: 0.1367 S22: -0.2159 S23: -0.0153 REMARK 3 S31: 0.0124 S32: 0.2226 S33: 0.1228 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000045933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; NSLS REMARK 200 BEAMLINE : 24-ID-C; X12C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.0 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38381 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : 0.07700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.35600 REMARK 200 R SYM FOR SHELL (I) : 0.35600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2FD6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 4000, 2.5% ETHANOL, 0.05% REMARK 280 SODIUM AZIDE, 50MM CACODYLATE PH 6.5, PH 7.5, MICRODIALYSIS, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.60250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, L, H, U, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H, U, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -1 REMARK 465 SER A 0 REMARK 465 SER A 1 REMARK 465 ASN A 2 REMARK 465 GLU A 3 REMARK 465 LEU A 4 REMARK 465 HIS A 5 REMARK 465 GLN A 6 REMARK 465 VAL A 7 REMARK 465 PRO A 8 REMARK 465 ASP A 133 REMARK 465 CYS L 213 REMARK 465 GLY H 127 REMARK 465 GLY H 209 REMARK 465 ARG U 0 REMARK 465 SER U 81 REMARK 465 GLY U 82 REMARK 465 ARG U 83 REMARK 465 ALA U 84 REMARK 465 VAL U 85 REMARK 465 THR U 86 REMARK 465 GLN U 131 REMARK 465 GLU U 132 REMARK 465 GLY U 133 REMARK 465 GLU U 134 REMARK 465 GLU U 135 REMARK 465 GLY U 136 REMARK 465 ARG U 137 REMARK 465 PRO U 138 REMARK 465 HIS U 249 REMARK 465 ALA U 250 REMARK 465 HIS U 251 REMARK 465 LEU U 276 REMARK 465 ASP U 277 REMARK 465 VAL U 278 REMARK 465 GLN U 279 REMARK 465 TYR U 280 REMARK 465 ARG U 281 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU L 105 OH TYR L 172 1.83 REMARK 500 NE2 HIS U 128 OE2 GLU U 183 1.92 REMARK 500 NE2 HIS U 143 OE2 GLU U 183 1.96 REMARK 500 O HIS U 273 N ASP U 275 1.99 REMARK 500 O ALA L 25 OG1 THR L 69 2.00 REMARK 500 O TYR L 93 N PHE L 96 2.01 REMARK 500 OH TYR A 58 O LYS A 61 2.01 REMARK 500 OD2 ASP A 12 NE2 HIS A 41 2.03 REMARK 500 CG1 VAL H 131 O VAL H 178 2.12 REMARK 500 OD2 ASP A 12 NE2 HIS A 29 2.13 REMARK 500 O TYR L 93 CD2 PHE L 96 2.19 REMARK 500 OE2 GLU L 50 ND1 HIS H 98 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 38 C GLY A 38 O 0.132 REMARK 500 HIS A 41 CG HIS A 41 CD2 0.073 REMARK 500 CYS L 193 CB CYS L 193 SG -0.128 REMARK 500 LYS U 7 C LYS U 7 O 0.193 REMARK 500 GLU U 183 CB GLU U 183 CG 0.263 REMARK 500 GLU U 183 CD GLU U 183 OE2 0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 88 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 LYS B 40 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 TYR L 93 CB - CG - CD2 ANGL. DEV. = 4.0 DEGREES REMARK 500 TYR L 93 CB - CG - CD1 ANGL. DEV. = -4.6 DEGREES REMARK 500 PRO L 94 C - N - CA ANGL. DEV. = -10.9 DEGREES REMARK 500 ARG L 187 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG L 187 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP H 101 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG U 192 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG U 192 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 -124.30 -70.15 REMARK 500 CYS A 11 74.86 57.51 REMARK 500 ASP A 12 1.55 -68.05 REMARK 500 ASN A 15 -131.98 66.58 REMARK 500 GLU A 52 -140.82 -84.63 REMARK 500 LYS A 61 -141.47 -90.12 REMARK 500 ALA A 62 101.01 79.80 REMARK 500 THR A 66 -36.93 -35.28 REMARK 500 ASN A 104 57.40 -162.21 REMARK 500 VAL A 128 124.58 -30.58 REMARK 500 LYS B 6 -49.50 177.51 REMARK 500 ARG B 8 -34.90 84.02 REMARK 500 THR B 10 48.80 -150.93 REMARK 500 CYS B 19 136.57 58.17 REMARK 500 GLU B 38 -90.13 -87.88 REMARK 500 LYS B 40 -99.16 -76.49 REMARK 500 ILE L 2 108.08 -10.69 REMARK 500 SER L 26 -29.40 -35.63 REMARK 500 TRP L 47 -57.54 -123.41 REMARK 500 GLU L 50 47.80 33.62 REMARK 500 ILE L 51 -52.64 90.41 REMARK 500 ALA L 84 -179.98 -175.63 REMARK 500 TYR L 93 -93.08 -17.74 REMARK 500 PRO L 94 -10.62 -36.89 REMARK 500 PHE L 96 32.97 38.65 REMARK 500 HIS H 52A -59.16 75.28 REMARK 500 SER H 82B 60.31 60.11 REMARK 500 SER H 129 -41.49 38.70 REMARK 500 MET H 130 8.82 -168.60 REMARK 500 VAL H 131 89.30 73.02 REMARK 500 SER H 155 -46.59 -140.69 REMARK 500 GLU U 34 -127.80 45.46 REMARK 500 ASP U 74 111.60 125.35 REMARK 500 SER U 88 83.50 79.65 REMARK 500 ARG U 89 -72.87 -130.06 REMARK 500 TYR U 92 -107.74 -113.37 REMARK 500 CYS U 153 -70.72 -79.45 REMARK 500 PRO U 154 102.81 -49.71 REMARK 500 ASN U 161 -158.68 -149.06 REMARK 500 GLU U 230 173.60 67.57 REMARK 500 PRO U 231 -83.56 -38.80 REMARK 500 LYS U 232 -169.77 -67.07 REMARK 500 ASN U 233 49.83 -84.44 REMARK 500 ASN U 259 -86.74 -131.63 REMARK 500 ASN U 272 -22.23 -25.11 REMARK 500 PRO U 274 33.34 -38.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 61 ALA A 62 -138.66 REMARK 500 MET H 130 VAL H 131 143.58 REMARK 500 CYS U 271 ASN U 272 144.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FD6 RELATED DB: PDB REMARK 900 STRUCTURE OF UROKINASE RECEPTOR IN COMPLEX WITH UROKINASE REMARK 900 RELATED ID: 3BT1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITHOUT FAB FRAGMENTS REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS COORDINATES IN CHAINS L AND H ARE USED NON-SEQUENTIAL REMARK 999 RESIDUE NUMBERING. IT IS DUE TO KABAT-WU NUMBERING, WHICH IS REMARK 999 TYPICAL FOR ANTIBODY. DBREF 3BT2 A 1 133 UNP P00749 UROK_HUMAN 21 153 DBREF 3BT2 B 2 41 UNP P04004 VTNC_HUMAN 21 60 DBREF 3BT2 L 1 213 PDB 3BT2 3BT2 1 213 DBREF 3BT2 H 1 209 PDB 3BT2 3BT2 1 209 DBREF 3BT2 U 1 281 UNP Q03405 UPAR_HUMAN 23 303 SEQADV 3BT2 ARG A -1 UNP P00749 EXPRESSION TAG SEQADV 3BT2 SER A 0 UNP P00749 EXPRESSION TAG SEQADV 3BT2 ARG U 0 UNP Q03405 EXPRESSION TAG SEQADV 3BT2 SER U 1A UNP Q03405 EXPRESSION TAG SEQRES 1 A 135 ARG SER SER ASN GLU LEU HIS GLN VAL PRO SER ASN CYS SEQRES 2 A 135 ASP CYS LEU ASN GLY GLY THR CYS VAL SER ASN LYS TYR SEQRES 3 A 135 PHE SER ASN ILE HIS TRP CYS ASN CYS PRO LYS LYS PHE SEQRES 4 A 135 GLY GLY GLN HIS CYS GLU ILE ASP LYS SER LYS THR CYS SEQRES 5 A 135 TYR GLU GLY ASN GLY HIS PHE TYR ARG GLY LYS ALA SER SEQRES 6 A 135 THR ASP THR MET GLY ARG PRO CYS LEU PRO TRP ASN SER SEQRES 7 A 135 ALA THR VAL LEU GLN GLN THR TYR HIS ALA HIS ARG SER SEQRES 8 A 135 ASP ALA LEU GLN LEU GLY LEU GLY LYS HIS ASN TYR CYS SEQRES 9 A 135 ARG ASN PRO ASP ASN ARG ARG ARG PRO TRP CYS TYR VAL SEQRES 10 A 135 GLN VAL GLY LEU LYS PRO LEU VAL GLN GLU CYS MET VAL SEQRES 11 A 135 HIS ASP CYS ALA ASP SEQRES 1 B 40 GLN GLU SER CYS LYS GLY ARG CYS THR GLU GLY PHE ASN SEQRES 2 B 40 VAL ASP LYS LYS CYS GLN CYS ASP GLU LEU CYS SER TYR SEQRES 3 B 40 TYR GLN SER CYS CYS THR ASP TYR THR ALA GLU CYS LYS SEQRES 4 B 40 PRO SEQRES 1 L 212 ASP ILE VAL LEU THR GLN SER PRO ASP ILE THR ALA ALA SEQRES 2 L 212 SER LEU GLY GLN LYS VAL THR ILE THR CYS SER ALA SER SEQRES 3 L 212 SER SER VAL SER TYR MET HIS TRP TYR GLN GLN LYS SER SEQRES 4 L 212 GLY THR SER PRO LYS PRO TRP ILE PHE GLU ILE SER LYS SEQRES 5 L 212 LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 6 L 212 SER GLY THR SER TYR SER LEU THR ILE SER SER MET GLU SEQRES 7 L 212 ALA GLU ASP ALA ALA ILE TYR TYR CYS GLN GLN TRP ASN SEQRES 8 L 212 TYR PRO PHE THR PHE GLY GLY GLY THR LYS LEU GLU ILE SEQRES 9 L 212 LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE PRO SEQRES 10 L 212 PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SER VAL SEQRES 11 L 212 VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP ILE ASN SEQRES 12 L 212 VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN GLY SEQRES 13 L 212 VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SER SEQRES 14 L 212 THR TYR SER MET SER SER THR LEU THR LEU THR LYS ASP SEQRES 15 L 212 GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA THR SEQRES 16 L 212 HIS LYS THR SER THR SER PRO ILE VAL LYS SER PHE ASN SEQRES 17 L 212 ARG ASN GLU CYS SEQRES 1 H 214 GLY VAL LYS LEU GLN GLN SER GLY PRO GLU VAL VAL LYS SEQRES 2 H 214 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 214 TYR SER PHE THR ASN PHE TYR ILE HIS TRP VAL LYS GLN SEQRES 4 H 214 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY TRP ILE PHE SEQRES 5 H 214 HIS GLY SER ASP ASN THR GLU TYR ASN GLU LYS PHE LYS SEQRES 6 H 214 ASP LYS ALA THR LEU THR ALA ASP THR SER SER SER THR SEQRES 7 H 214 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 214 ALA VAL TYR PHE CYS ALA ARG TRP GLY PRO HIS TRP TYR SEQRES 9 H 214 PHE ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SEQRES 10 H 214 SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA SEQRES 11 H 214 PRO GLY ASN SER MET VAL THR LEU GLY CYS LEU VAL LYS SEQRES 12 H 214 GLY TYR PHE PRO GLU PRO VAL THR VAL THR TRP ASN SER SEQRES 13 H 214 GLY SER LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 14 H 214 LEU GLN SER ASP LEU TYR THR LEU SER SER SER VAL THR SEQRES 15 H 214 VAL PRO SER SER THR TRP PRO SER GLU THR VAL THR CYS SEQRES 16 H 214 ASN VAL ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS SEQRES 17 H 214 LYS ILE ALA ALA ALA GLY SEQRES 1 U 283 ARG SER LEU ARG CYS MET GLN CYS LYS THR ASN GLY ASP SEQRES 2 U 283 CYS ARG VAL GLU GLU CYS ALA LEU GLY GLN ASP LEU CYS SEQRES 3 U 283 ARG THR THR ILE VAL ARG LEU TRP GLU GLU GLY GLU GLU SEQRES 4 U 283 LEU GLU LEU VAL GLU LYS SER CYS THR HIS SER GLU LYS SEQRES 5 U 283 THR ASN ARG THR LEU SER TYR ARG THR GLY LEU LYS ILE SEQRES 6 U 283 THR SER LEU THR GLU VAL VAL CYS GLY LEU ASP LEU CYS SEQRES 7 U 283 ASN GLN GLY ASN SER GLY ARG ALA VAL THR TYR SER ARG SEQRES 8 U 283 SER ARG TYR LEU GLU CYS ILE SER CYS GLY SER SER ASP SEQRES 9 U 283 MET SER CYS GLU ARG GLY ARG HIS GLN SER LEU GLN CYS SEQRES 10 U 283 ARG SER PRO GLU GLU GLN CYS LEU ASP VAL VAL THR HIS SEQRES 11 U 283 TRP ILE GLN GLU GLY GLU GLU GLY ARG PRO LYS ASP ASP SEQRES 12 U 283 ARG HIS LEU ARG GLY CYS GLY TYR LEU PRO GLY CYS PRO SEQRES 13 U 283 GLY SER ASN GLY PHE HIS ASN ASN ASP THR PHE HIS PHE SEQRES 14 U 283 LEU LYS CYS CYS ASN THR THR LYS CYS ASN GLU GLY PRO SEQRES 15 U 283 ILE LEU GLU LEU GLU ASN LEU PRO GLN ASN GLY ARG GLN SEQRES 16 U 283 CYS TYR SER CYS LYS GLY ASN SER THR HIS GLY CYS SER SEQRES 17 U 283 SER GLU GLU THR PHE LEU ILE ASP CYS ARG GLY PRO MET SEQRES 18 U 283 ASN GLN CYS LEU VAL ALA THR GLY THR HIS GLU PRO LYS SEQRES 19 U 283 ASN GLN SER TYR MET VAL ARG GLY CYS ALA THR ALA SER SEQRES 20 U 283 MET CYS GLN HIS ALA HIS LEU GLY ASP ALA PHE SER MET SEQRES 21 U 283 ASN HIS ILE ASP VAL SER CYS CYS THR LYS SER GLY CYS SEQRES 22 U 283 ASN HIS PRO ASP LEU ASP VAL GLN TYR ARG MODRES 3BT2 ASN U 52 ASN GLYCOSYLATION SITE MODRES 3BT2 ASN U 172 ASN GLYCOSYLATION SITE MODRES 3BT2 ASN U 200 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG U1052 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 6 NAG 5(C8 H15 N O6) FORMUL 9 HOH *57(H2 O) HELIX 1 1 LYS A 23 SER A 26 5 4 HELIX 2 2 THR A 78 GLN A 82 5 5 HELIX 3 3 ASP A 90 GLY A 95 1 6 HELIX 4 4 THR B 33 GLU B 38 1 6 HELIX 5 5 GLU L 79 ALA L 83 5 5 HELIX 6 6 SER L 120 SER L 126 1 7 HELIX 7 7 LYS L 182 ARG L 187 1 6 HELIX 8 8 SER H 28 PHE H 32 5 5 HELIX 9 9 GLU H 61 LYS H 64 5 4 HELIX 10 10 THR H 73 SER H 75 5 3 HELIX 11 11 THR H 83 SER H 87 5 5 HELIX 12 12 SER H 151 SER H 153 5 3 HELIX 13 13 PRO H 195 SER H 198 5 4 HELIX 14 14 LEU U 75 GLY U 79 5 5 HELIX 15 15 SER U 101 MET U 103 5 3 HELIX 16 16 GLU U 183 LEU U 187 5 5 HELIX 17 17 ALA U 244 GLN U 248 5 5 SHEET 1 A 2 THR A 18 SER A 21 0 SHEET 2 A 2 HIS A 29 ASN A 32 -1 O TRP A 30 N VAL A 20 SHEET 1 B 2 PHE A 37 GLY A 38 0 SHEET 2 B 2 ILE A 44 ASP A 45 -1 O ILE A 44 N GLY A 38 SHEET 1 C 2 TRP A 112 VAL A 117 0 SHEET 2 C 2 LYS A 120 GLU A 125 -1 O LEU A 122 N VAL A 115 SHEET 1 D 4 LEU L 4 SER L 7 0 SHEET 2 D 4 VAL L 19 ALA L 25 -1 O SER L 24 N THR L 5 SHEET 3 D 4 SER L 70 ILE L 75 -1 O TYR L 71 N CYS L 23 SHEET 4 D 4 PHE L 62 SER L 67 -1 N SER L 65 O SER L 72 SHEET 1 E 6 ILE L 10 ALA L 13 0 SHEET 2 E 6 THR L 102 ILE L 106 1 O GLU L 105 N ALA L 13 SHEET 3 E 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 E 6 MET L 33 GLN L 38 -1 N GLN L 38 O ILE L 85 SHEET 5 E 6 LYS L 45 PHE L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 E 6 LYS L 53 LEU L 54 -1 O LYS L 53 N PHE L 49 SHEET 1 F 4 THR L 113 PHE L 117 0 SHEET 2 F 4 GLY L 128 PHE L 138 -1 O ASN L 136 N THR L 113 SHEET 3 F 4 TYR L 172 THR L 181 -1 O LEU L 178 N VAL L 131 SHEET 4 F 4 VAL L 158 TRP L 162 -1 N LEU L 159 O THR L 177 SHEET 1 G 4 SER L 152 ARG L 154 0 SHEET 2 G 4 ASN L 144 ILE L 149 -1 N TRP L 147 O ARG L 154 SHEET 3 G 4 SER L 190 THR L 196 -1 O THR L 196 N ASN L 144 SHEET 4 G 4 ILE L 204 ASN L 209 -1 O ILE L 204 N ALA L 195 SHEET 1 H 4 LYS H 3 GLN H 6 0 SHEET 2 H 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 H 4 THR H 77 LEU H 82 -1 O LEU H 82 N VAL H 18 SHEET 4 H 4 ALA H 67 ASP H 72 -1 N THR H 70 O TYR H 79 SHEET 1 I 6 GLU H 10 VAL H 12 0 SHEET 2 I 6 THR H 107 VAL H 111 1 O THR H 108 N GLU H 10 SHEET 3 I 6 ALA H 88 TRP H 95 -1 N TYR H 90 O THR H 107 SHEET 4 I 6 ILE H 34 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 5 I 6 GLU H 46 ILE H 51 -1 O ILE H 48 N TRP H 36 SHEET 6 I 6 THR H 57 TYR H 59 -1 O GLU H 58 N TRP H 50 SHEET 1 J 4 GLU H 10 VAL H 12 0 SHEET 2 J 4 THR H 107 VAL H 111 1 O THR H 108 N GLU H 10 SHEET 3 J 4 ALA H 88 TRP H 95 -1 N TYR H 90 O THR H 107 SHEET 4 J 4 PHE H 100A TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 K 4 SER H 120 LEU H 124 0 SHEET 2 K 4 THR H 132 TYR H 140 -1 O LEU H 136 N TYR H 122 SHEET 3 K 4 LEU H 169 THR H 177 -1 O VAL H 176 N LEU H 133 SHEET 4 K 4 VAL H 158 THR H 160 -1 N HIS H 159 O SER H 175 SHEET 1 L 4 SER H 120 LEU H 124 0 SHEET 2 L 4 THR H 132 TYR H 140 -1 O LEU H 136 N TYR H 122 SHEET 3 L 4 LEU H 169 THR H 177 -1 O VAL H 176 N LEU H 133 SHEET 4 L 4 VAL H 164 GLN H 166 -1 N GLN H 166 O LEU H 169 SHEET 1 M 3 THR H 146 TRP H 149 0 SHEET 2 M 3 THR H 189 HIS H 194 -1 O ALA H 193 N THR H 146 SHEET 3 M 3 THR H 199 LYS H 204 -1 O VAL H 201 N VAL H 192 SHEET 1 N 2 ARG U 2 CYS U 6 0 SHEET 2 N 2 CYS U 12 GLU U 16 -1 O ARG U 13 N GLN U 5 SHEET 1 O11 GLU U 36 THR U 46 0 SHEET 2 O11 LEU U 23 GLU U 33 -1 N LEU U 31 O LEU U 38 SHEET 3 O11 LYS U 62 CYS U 71 -1 O THR U 67 N ILE U 28 SHEET 4 O11 ARG U 53 THR U 59 -1 N LEU U 55 O LEU U 66 SHEET 5 O11 HIS U 143 TYR U 149 -1 O CYS U 147 N SER U 56 SHEET 6 O11 GLN U 121 TRP U 129 -1 N GLN U 121 O GLY U 148 SHEET 7 O11 THR U 164 CYS U 171 -1 O PHE U 167 N VAL U 126 SHEET 8 O11 GLY U 155 ASN U 161 -1 N ASN U 157 O LEU U 168 SHEET 9 O11 GLN U 234 ALA U 242 -1 O CYS U 241 N HIS U 160 SHEET 10 O11 GLN U 189 GLY U 199 -1 N CYS U 197 O ARG U 239 SHEET 11 O11 PHE U 211 ARG U 216 -1 O ILE U 213 N CYS U 194 SHEET 1 P 9 GLN U 111 GLN U 114 0 SHEET 2 P 9 GLU U 94 GLY U 99 -1 N SER U 97 O GLN U 111 SHEET 3 P 9 HIS U 143 TYR U 149 -1 O ARG U 145 N CYS U 98 SHEET 4 P 9 GLN U 121 TRP U 129 -1 N GLN U 121 O GLY U 148 SHEET 5 P 9 THR U 164 CYS U 171 -1 O PHE U 167 N VAL U 126 SHEET 6 P 9 GLY U 155 ASN U 161 -1 N ASN U 157 O LEU U 168 SHEET 7 P 9 GLN U 234 ALA U 242 -1 O CYS U 241 N HIS U 160 SHEET 8 P 9 GLN U 221 HIS U 229 -1 N GLY U 227 O TYR U 236 SHEET 9 P 9 ASP U 262 CYS U 266 -1 O CYS U 266 N CYS U 222 SSBOND 1 CYS A 11 CYS A 19 1555 1555 2.07 SSBOND 2 CYS A 13 CYS A 31 1555 1555 2.02 SSBOND 3 CYS A 33 CYS A 42 1555 1555 2.04 SSBOND 4 CYS A 50 CYS A 131 1555 1555 2.02 SSBOND 5 CYS A 71 CYS A 113 1555 1555 2.04 SSBOND 6 CYS A 102 CYS A 126 1555 1555 2.03 SSBOND 7 CYS B 5 CYS B 21 1555 1555 2.03 SSBOND 8 CYS B 9 CYS B 39 1555 1555 2.04 SSBOND 9 CYS B 19 CYS B 32 1555 1555 2.03 SSBOND 10 CYS B 25 CYS B 31 1555 1555 2.04 SSBOND 11 CYS L 23 CYS L 88 1555 1555 2.13 SSBOND 12 CYS L 133 CYS L 193 1555 1555 2.06 SSBOND 13 CYS H 22 CYS H 92 1555 1555 2.14 SSBOND 14 CYS H 135 CYS H 190 1555 1555 2.07 SSBOND 15 CYS U 3 CYS U 24 1555 1555 2.01 SSBOND 16 CYS U 6 CYS U 12 1555 1555 2.06 SSBOND 17 CYS U 17 CYS U 45 1555 1555 2.04 SSBOND 18 CYS U 71 CYS U 76 1555 1555 2.02 SSBOND 19 CYS U 95 CYS U 122 1555 1555 2.02 SSBOND 20 CYS U 98 CYS U 105 1555 1555 2.08 SSBOND 21 CYS U 115 CYS U 147 1555 1555 2.07 SSBOND 22 CYS U 153 CYS U 170 1555 1555 2.06 SSBOND 23 CYS U 171 CYS U 176 1555 1555 2.05 SSBOND 24 CYS U 194 CYS U 222 1555 1555 2.04 SSBOND 25 CYS U 197 CYS U 205 1555 1555 2.10 SSBOND 26 CYS U 215 CYS U 241 1555 1555 2.06 SSBOND 27 CYS U 247 CYS U 265 1555 1555 2.03 SSBOND 28 CYS U 266 CYS U 271 1555 1555 2.02 LINK ND2 ASN U 52 C1 NAG U1052 1555 1555 1.46 LINK ND2 ASN U 172 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN U 200 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.47 CISPEP 1 SER L 7 PRO L 8 0 -1.97 CISPEP 2 TYR L 139 PRO L 140 0 -4.12 CISPEP 3 PHE H 141 PRO H 142 0 -2.15 CISPEP 4 GLU H 143 PRO H 144 0 2.71 CISPEP 5 TRP H 183 PRO H 184 0 0.60 CRYST1 52.096 87.205 124.274 90.00 94.31 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019195 0.000000 0.001447 0.00000 SCALE2 0.000000 0.011467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008070 0.00000