PDB Short entry for 3BWY HEADER TRANSFERASE 10-JAN-08 3BWY TITLE CRYSTAL STRUCTURE OF HUMAN 108M CATECHOL O-METHYLTRANSFERASE BOUND TITLE 2 WITH S-ADENOSYLMETHIONINE AND INHIBITOR DINITROCATECHOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: (CATECHOL-O-METHYLTRANSFERASE, ISOFORM CRA_A; COMPND 5 EC: 2.1.1.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: V108M POLYMORPHISM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: COMT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS COMT, METHYLTRANSFERASE, POLYMORPHISM, ROSSMANN FOLD, SAM, DNC, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.RUTHERFORD,I.LE TRONG,R.E.STENKAMP,W.W.PARSON REVDAT 5 30-AUG-23 3BWY 1 REMARK LINK REVDAT 4 25-OCT-17 3BWY 1 REMARK REVDAT 3 24-FEB-09 3BWY 1 VERSN REVDAT 2 09-SEP-08 3BWY 1 JRNL REVDAT 1 03-JUN-08 3BWY 0 JRNL AUTH K.RUTHERFORD,I.LE TRONG,R.E.STENKAMP,W.W.PARSON JRNL TITL CRYSTAL STRUCTURES OF HUMAN 108V AND 108M CATECHOL JRNL TITL 2 O-METHYLTRANSFERASE. JRNL REF J.MOL.BIOL. V. 380 120 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18486144 JRNL DOI 10.1016/J.JMB.2008.04.040 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.8 REMARK 3 NUMBER OF REFLECTIONS : 40175 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.126 REMARK 3 R VALUE (WORKING SET) : 0.124 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2061 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 841 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 24.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1671 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 155 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.87000 REMARK 3 B22 (A**2) : 1.61000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.053 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.032 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.708 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1810 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1204 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2458 ; 1.916 ; 2.013 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2967 ; 1.125 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 213 ; 5.371 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;37.086 ;25.119 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 321 ;12.697 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;22.646 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 279 ; 0.134 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1950 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 325 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1074 ; 3.543 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 434 ; 2.263 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1743 ; 4.484 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 736 ; 6.292 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 715 ; 7.707 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3014 ; 4.595 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 156 ;10.987 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2984 ; 5.077 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BWY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000046059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.910 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40351 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.9 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 28.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3BWM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, NACL, MGCL2, DTT, HEPES, MPD, REMARK 280 SAM, DNC, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.62450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.25950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.08150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.25950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.62450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.08150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 489 O HOH A 526 4545 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 3 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 145 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 40 39.36 -86.68 REMARK 500 TYR A 68 -113.28 61.51 REMARK 500 ASP A 133 -76.53 -95.71 REMARK 500 ASP A 141 40.00 -156.74 REMARK 500 HIS A 142 -158.51 -103.53 REMARK 500 SER A 196 -141.50 -162.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 300 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD1 REMARK 620 2 ASP A 169 OD2 92.1 REMARK 620 3 ASN A 170 OD1 94.0 83.2 REMARK 620 4 DNC A 302 O1 164.6 103.3 89.1 REMARK 620 5 DNC A 302 O2 88.4 165.7 82.5 77.0 REMARK 620 6 HOH A 412 O 91.7 87.1 169.0 87.9 107.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DNC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 305 DBREF 3BWY A 2 215 UNP Q6ICE6 Q6ICE6_HUMAN 52 265 SEQRES 1 A 214 GLY ASP THR LYS GLU GLN ARG ILE LEU ASN HIS VAL LEU SEQRES 2 A 214 GLN HIS ALA GLU PRO GLY ASN ALA GLN SER VAL LEU GLU SEQRES 3 A 214 ALA ILE ASP THR TYR CYS GLU GLN LYS GLU TRP ALA MET SEQRES 4 A 214 ASN VAL GLY ASP LYS LYS GLY LYS ILE VAL ASP ALA VAL SEQRES 5 A 214 ILE GLN GLU HIS GLN PRO SER VAL LEU LEU GLU LEU GLY SEQRES 6 A 214 ALA TYR CYS GLY TYR SER ALA VAL ARG MET ALA ARG LEU SEQRES 7 A 214 LEU SER PRO GLY ALA ARG LEU ILE THR ILE GLU ILE ASN SEQRES 8 A 214 PRO ASP CYS ALA ALA ILE THR GLN ARG MET VAL ASP PHE SEQRES 9 A 214 ALA GLY MET LYS ASP LYS VAL THR LEU VAL VAL GLY ALA SEQRES 10 A 214 SER GLN ASP ILE ILE PRO GLN LEU LYS LYS LYS TYR ASP SEQRES 11 A 214 VAL ASP THR LEU ASP MET VAL PHE LEU ASP HIS TRP LYS SEQRES 12 A 214 ASP ARG TYR LEU PRO ASP THR LEU LEU LEU GLU GLU CYS SEQRES 13 A 214 GLY LEU LEU ARG LYS GLY THR VAL LEU LEU ALA ASP ASN SEQRES 14 A 214 VAL ILE CYS PRO GLY ALA PRO ASP PHE LEU ALA HIS VAL SEQRES 15 A 214 ARG GLY SER SER CYS PHE GLU CYS THR HIS TYR GLN SER SEQRES 16 A 214 PHE LEU GLU TYR ARG GLU VAL VAL ASP GLY LEU GLU LYS SEQRES 17 A 214 ALA ILE TYR LYS GLY PRO HET MG A 300 1 HET SAM A 301 27 HET DNC A 302 14 HET MPD A 303 8 HET MPD A 304 8 HET MPD A 305 8 HETNAM MG MAGNESIUM ION HETNAM SAM S-ADENOSYLMETHIONINE HETNAM DNC 3,5-DINITROCATECHOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 2 MG MG 2+ FORMUL 3 SAM C15 H22 N6 O5 S FORMUL 4 DNC C6 H4 N2 O6 FORMUL 5 MPD 3(C6 H14 O2) FORMUL 8 HOH *155(H2 O) HELIX 1 1 THR A 4 ALA A 17 1 14 HELIX 2 2 ASN A 21 LYS A 36 1 16 HELIX 3 3 VAL A 42 GLN A 58 1 17 HELIX 4 4 GLY A 70 ARG A 78 1 9 HELIX 5 5 ASN A 92 ALA A 106 1 15 HELIX 6 6 MET A 108 ASP A 110 5 3 HELIX 7 7 ALA A 118 ILE A 123 1 6 HELIX 8 8 GLN A 125 ASP A 131 1 7 HELIX 9 9 TRP A 143 ASP A 145 5 3 HELIX 10 10 ARG A 146 CYS A 157 1 12 HELIX 11 11 ALA A 176 SER A 186 1 11 SHEET 1 A 7 VAL A 112 VAL A 116 0 SHEET 2 A 7 ARG A 85 GLU A 90 1 N LEU A 86 O THR A 113 SHEET 3 A 7 VAL A 61 LEU A 65 1 N LEU A 62 O ILE A 87 SHEET 4 A 7 LEU A 135 LEU A 140 1 O PHE A 139 N LEU A 65 SHEET 5 A 7 LEU A 160 ALA A 168 1 O LEU A 167 N VAL A 138 SHEET 6 A 7 VAL A 204 TYR A 212 -1 O TYR A 212 N GLY A 163 SHEET 7 A 7 PHE A 189 PHE A 197 -1 N SER A 196 O ASP A 205 LINK OD1 ASP A 141 MG MG A 300 1555 1555 2.09 LINK OD2 ASP A 169 MG MG A 300 1555 1555 2.13 LINK OD1 ASN A 170 MG MG A 300 1555 1555 2.12 LINK MG MG A 300 O1 DNC A 302 1555 1555 2.08 LINK MG MG A 300 O2 DNC A 302 1555 1555 2.09 LINK MG MG A 300 O HOH A 412 1555 1555 2.06 CISPEP 1 CYS A 173 PRO A 174 0 6.64 SITE 1 AC1 4 ASP A 141 ASP A 169 ASN A 170 HOH A 412 SITE 1 AC2 19 MET A 40 GLY A 66 ALA A 67 TYR A 68 SITE 2 AC2 19 TYR A 71 SER A 72 ILE A 89 GLU A 90 SITE 3 AC2 19 ILE A 91 GLY A 117 ALA A 118 SER A 119 SITE 4 AC2 19 GLN A 120 ASP A 141 HIS A 142 TRP A 143 SITE 5 AC2 19 HOH A 402 HOH A 445 HOH A 465 SITE 1 AC3 10 TRP A 38 ASP A 141 HIS A 142 TRP A 143 SITE 2 AC3 10 LYS A 144 ASP A 169 ASN A 170 GLU A 199 SITE 3 AC3 10 HOH A 412 HOH A 446 SITE 1 AC4 6 ASN A 21 SER A 24 ALA A 52 GLU A 56 SITE 2 AC4 6 TYR A 194 HOH A 458 SITE 1 AC5 7 THR A 4 GLU A 6 ASP A 94 ASP A 136 SITE 2 AC5 7 ARG A 161 HOH A 424 HOH A 558 SITE 1 AC6 5 GLN A 7 ASP A 94 ALA A 97 LYS A 162 SITE 2 AC6 5 HOH A 530 CRYST1 43.249 66.163 68.519 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023122 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015114 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014594 0.00000