PDB Short entry for 3CKA HEADER MEMBRANE PROTEIN 14-MAR-08 3CKA TITLE THE CRYSTAL STRUCTURE OF OSPA MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER SURFACE PROTEIN A; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIELLA BURGDORFERI; SOURCE 3 ORGANISM_COMMON: LYME DISEASE SPIROCHETE; SOURCE 4 ORGANISM_TAXID: 139; SOURCE 5 GENE: OSPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24A KEYWDS BETA-SHEET, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.MAKABE,M.BIANCALANA,V.TERECHKO,S.KOIDE REVDAT 5 30-AUG-23 3CKA 1 REMARK REVDAT 4 28-JUN-17 3CKA 1 SOURCE DBREF SEQADV REVDAT 3 16-APR-14 3CKA 1 COMPND SEQADV VERSN REVDAT 2 02-MAR-10 3CKA 1 JRNL REVDAT 1 17-MAR-09 3CKA 0 JRNL AUTH M.BIANCALANA,K.MAKABE,S.KOIDE JRNL TITL MINIMALIST DESIGN OF WATER-SOLUBLE CROSS-{BETA} JRNL TITL 2 ARCHITECTURE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 3469 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20133689 JRNL DOI 10.1073/PNAS.0912654107 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 77805 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4100 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4631 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 224 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4807 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 517 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.19000 REMARK 3 B22 (A**2) : -0.63000 REMARK 3 B33 (A**2) : 0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.799 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4990 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3378 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6703 ; 1.833 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8378 ; 0.971 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 651 ; 8.118 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;33.322 ;26.374 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 964 ;14.912 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.752 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 805 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5476 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 908 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 821 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3311 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2430 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2811 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 369 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.224 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 87 ; 0.222 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 41 ; 0.198 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3429 ; 1.557 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1317 ; 0.388 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5105 ; 2.104 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2005 ; 3.524 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1589 ; 4.801 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CKA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82033 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.78000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2OY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG400, 0.1M TRIS-HCL, 10MG/ML REMARK 280 PROTEIN WITH 4MM THIOFLAVIN-T, PH 9, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.64650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.07650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.82350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.07650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.64650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.82350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 HIS A 25 REMARK 465 MET A 26 REMARK 465 LYS A 27 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 HIS B 25 REMARK 465 MET B 26 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 THR A 168 CA CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 119 -2.44 81.94 REMARK 500 ASP A 141 -31.20 -29.29 REMARK 500 LYS A 142 -12.89 109.10 REMARK 500 LYS A 165 15.20 80.04 REMARK 500 ASP A 318 -179.24 -68.33 REMARK 500 SER B 29 153.11 -48.74 REMARK 500 SER B 37 11.63 89.52 REMARK 500 ALA B 60 -0.61 73.83 REMARK 500 LEU B 94 12.66 59.91 REMARK 500 LYS B 103 175.79 -59.59 REMARK 500 SER B 107 -32.66 -130.30 REMARK 500 ASP B 118 6.90 -66.70 REMARK 500 LYS B 119 -7.68 89.66 REMARK 500 ASP B 141 4.40 -69.18 REMARK 500 LYS B 188 -0.77 78.89 REMARK 500 LYS B 244 152.61 175.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 36 SER B 37 135.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 800 REMARK 610 1PE B 801 REMARK 610 1PE B 803 REMARK 610 1PE B 804 REMARK 610 1PE B 805 REMARK 610 1PE B 806 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 806 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CKF RELATED DB: PDB REMARK 900 RELATED ID: 3CKG RELATED DB: PDB REMARK 900 RELATED ID: 2OY1 RELATED DB: PDB REMARK 900 RELATED ID: 2OY5 RELATED DB: PDB REMARK 900 RELATED ID: 2OY7 RELATED DB: PDB REMARK 900 RELATED ID: 2OY8 RELATED DB: PDB REMARK 900 RELATED ID: 2OYB RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS AN INSERTION BETWEEN SEQUENCE DATABASE REFERENCE REMARK 999 RESIDUES 141 AND 142. THE SEQUENCE OF THE INSERTION IS REMARK 999 KSSTYELFNEKGELSFKYITRADKSSTYELFNEKGELSFKYITRADKSSTYELFNE REMARK 999 KGELSFKYITRADKSSTYELFNEKGELSFKYITRAD DBREF 3CKA A 27 141 UNP D2Y4L7 D2Y4L7_BORBG 27 141 DBREF 3CKA A 142 210 PDB 3CKA 3CKA 142 210 DBREF 3CKA A 211 342 UNP Q45040 Q45040_BORBG 142 273 DBREF 3CKA B 27 141 UNP D2Y4L7 D2Y4L7_BORBG 27 141 DBREF 3CKA B 142 210 PDB 3CKA 3CKA 142 210 DBREF 3CKA B 211 342 UNP Q45040 Q45040_BORBG 142 273 SEQADV 3CKA GLY A 23 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA SER A 24 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA HIS A 25 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA MET A 26 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA SER A 37 UNP D2Y4L7 GLU 37 ENGINEERED MUTATION SEQADV 3CKA SER A 45 UNP D2Y4L7 GLU 45 ENGINEERED MUTATION SEQADV 3CKA SER A 46 UNP D2Y4L7 LYS 46 ENGINEERED MUTATION SEQADV 3CKA ALA A 48 UNP D2Y4L7 LYS 48 ENGINEERED MUTATION SEQADV 3CKA ALA A 60 UNP D2Y4L7 LYS 60 ENGINEERED MUTATION SEQADV 3CKA SER A 64 UNP D2Y4L7 LYS 64 ENGINEERED MUTATION SEQADV 3CKA ALA A 83 UNP D2Y4L7 LYS 83 ENGINEERED MUTATION SEQADV 3CKA SER A 104 UNP D2Y4L7 GLU 104 ENGINEERED MUTATION SEQADV 3CKA SER A 107 UNP D2Y4L7 LYS 107 ENGINEERED MUTATION SEQADV 3CKA TYR A 123 UNP D2Y4L7 GLU 123 ENGINEERED MUTATION SEQADV 3CKA LEU A 125 UNP D2Y4L7 LYS 125 ENGINEERED MUTATION SEQADV 3CKA LEU A 132 UNP D2Y4L7 VAL 132 ENGINEERED MUTATION SEQADV 3CKA PHE A 134 UNP D2Y4L7 GLU 134 ENGINEERED MUTATION SEQADV 3CKA TYR A 136 UNP D2Y4L7 ILE 136 ENGINEERED MUTATION SEQADV 3CKA SER A 308 UNP Q45040 LYS 239 ENGINEERED MUTATION SEQADV 3CKA SER A 309 UNP Q45040 GLU 240 ENGINEERED MUTATION SEQADV 3CKA SER A 323 UNP Q45040 LYS 254 ENGINEERED MUTATION SEQADV 3CKA GLY B 23 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA SER B 24 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA HIS B 25 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA MET B 26 UNP D2Y4L7 EXPRESSION TAG SEQADV 3CKA SER B 37 UNP D2Y4L7 GLU 37 ENGINEERED MUTATION SEQADV 3CKA SER B 45 UNP D2Y4L7 GLU 45 ENGINEERED MUTATION SEQADV 3CKA SER B 46 UNP D2Y4L7 LYS 46 ENGINEERED MUTATION SEQADV 3CKA ALA B 48 UNP D2Y4L7 LYS 48 ENGINEERED MUTATION SEQADV 3CKA ALA B 60 UNP D2Y4L7 LYS 60 ENGINEERED MUTATION SEQADV 3CKA SER B 64 UNP D2Y4L7 LYS 64 ENGINEERED MUTATION SEQADV 3CKA ALA B 83 UNP D2Y4L7 LYS 83 ENGINEERED MUTATION SEQADV 3CKA SER B 104 UNP D2Y4L7 GLU 104 ENGINEERED MUTATION SEQADV 3CKA SER B 107 UNP D2Y4L7 LYS 107 ENGINEERED MUTATION SEQADV 3CKA TYR B 123 UNP D2Y4L7 GLU 123 ENGINEERED MUTATION SEQADV 3CKA LEU B 125 UNP D2Y4L7 LYS 125 ENGINEERED MUTATION SEQADV 3CKA LEU B 132 UNP D2Y4L7 VAL 132 ENGINEERED MUTATION SEQADV 3CKA PHE B 134 UNP D2Y4L7 GLU 134 ENGINEERED MUTATION SEQADV 3CKA TYR B 136 UNP D2Y4L7 ILE 136 ENGINEERED MUTATION SEQADV 3CKA SER B 308 UNP Q45040 LYS 239 ENGINEERED MUTATION SEQADV 3CKA SER B 309 UNP Q45040 GLU 240 ENGINEERED MUTATION SEQADV 3CKA SER B 323 UNP Q45040 LYS 254 ENGINEERED MUTATION SEQRES 1 A 320 GLY SER HIS MET LYS ASN SER VAL SER VAL ASP LEU PRO SEQRES 2 A 320 GLY SER MET LYS VAL LEU VAL SER LYS SER SER ASN ALA SEQRES 3 A 320 ASP GLY LYS TYR ASP LEU ILE ALA THR VAL ASP ALA LEU SEQRES 4 A 320 GLU LEU SER GLY THR SER ASP LYS ASN ASN GLY SER GLY SEQRES 5 A 320 VAL LEU GLU GLY VAL LYS ALA ASP ALA SER LYS VAL LYS SEQRES 6 A 320 LEU THR ILE SER ASP ASP LEU GLY GLN THR THR LEU GLU SEQRES 7 A 320 VAL PHE LYS SER ASP GLY SER THR LEU VAL SER LYS LYS SEQRES 8 A 320 VAL THR SER LYS ASP LYS SER SER THR TYR GLU LEU PHE SEQRES 9 A 320 ASN GLU LYS GLY GLU LEU SER PHE LYS TYR ILE THR ARG SEQRES 10 A 320 ALA ASP LYS SER SER THR TYR GLU LEU PHE ASN GLU LYS SEQRES 11 A 320 GLY GLU LEU SER PHE LYS TYR ILE THR ARG ALA ASP LYS SEQRES 12 A 320 SER SER THR TYR GLU LEU PHE ASN GLU LYS GLY GLU LEU SEQRES 13 A 320 SER PHE LYS TYR ILE THR ARG ALA ASP LYS SER SER THR SEQRES 14 A 320 TYR GLU LEU PHE ASN GLU LYS GLY GLU LEU SER PHE LYS SEQRES 15 A 320 TYR ILE THR ARG ALA ASP GLY THR ARG LEU GLU TYR THR SEQRES 16 A 320 GLY ILE LYS SER ASP GLY SER GLY LYS ALA LYS GLU VAL SEQRES 17 A 320 LEU LYS GLY TYR VAL LEU GLU GLY THR LEU THR ALA GLU SEQRES 18 A 320 LYS THR THR LEU VAL VAL LYS GLU GLY THR VAL THR LEU SEQRES 19 A 320 SER LYS ASN ILE SER LYS SER GLY GLU VAL SER VAL GLU SEQRES 20 A 320 LEU ASN ASP THR ASP SER SER ALA ALA THR LYS LYS THR SEQRES 21 A 320 ALA ALA TRP ASN SER GLY THR SER THR LEU THR ILE THR SEQRES 22 A 320 VAL ASN SER LYS LYS THR LYS ASP LEU VAL PHE THR SER SEQRES 23 A 320 SER ASN THR ILE THR VAL GLN GLN TYR ASP SER ASN GLY SEQRES 24 A 320 THR SER LEU GLU GLY SER ALA VAL GLU ILE THR LYS LEU SEQRES 25 A 320 ASP GLU ILE LYS ASN ALA LEU LYS SEQRES 1 B 320 GLY SER HIS MET LYS ASN SER VAL SER VAL ASP LEU PRO SEQRES 2 B 320 GLY SER MET LYS VAL LEU VAL SER LYS SER SER ASN ALA SEQRES 3 B 320 ASP GLY LYS TYR ASP LEU ILE ALA THR VAL ASP ALA LEU SEQRES 4 B 320 GLU LEU SER GLY THR SER ASP LYS ASN ASN GLY SER GLY SEQRES 5 B 320 VAL LEU GLU GLY VAL LYS ALA ASP ALA SER LYS VAL LYS SEQRES 6 B 320 LEU THR ILE SER ASP ASP LEU GLY GLN THR THR LEU GLU SEQRES 7 B 320 VAL PHE LYS SER ASP GLY SER THR LEU VAL SER LYS LYS SEQRES 8 B 320 VAL THR SER LYS ASP LYS SER SER THR TYR GLU LEU PHE SEQRES 9 B 320 ASN GLU LYS GLY GLU LEU SER PHE LYS TYR ILE THR ARG SEQRES 10 B 320 ALA ASP LYS SER SER THR TYR GLU LEU PHE ASN GLU LYS SEQRES 11 B 320 GLY GLU LEU SER PHE LYS TYR ILE THR ARG ALA ASP LYS SEQRES 12 B 320 SER SER THR TYR GLU LEU PHE ASN GLU LYS GLY GLU LEU SEQRES 13 B 320 SER PHE LYS TYR ILE THR ARG ALA ASP LYS SER SER THR SEQRES 14 B 320 TYR GLU LEU PHE ASN GLU LYS GLY GLU LEU SER PHE LYS SEQRES 15 B 320 TYR ILE THR ARG ALA ASP GLY THR ARG LEU GLU TYR THR SEQRES 16 B 320 GLY ILE LYS SER ASP GLY SER GLY LYS ALA LYS GLU VAL SEQRES 17 B 320 LEU LYS GLY TYR VAL LEU GLU GLY THR LEU THR ALA GLU SEQRES 18 B 320 LYS THR THR LEU VAL VAL LYS GLU GLY THR VAL THR LEU SEQRES 19 B 320 SER LYS ASN ILE SER LYS SER GLY GLU VAL SER VAL GLU SEQRES 20 B 320 LEU ASN ASP THR ASP SER SER ALA ALA THR LYS LYS THR SEQRES 21 B 320 ALA ALA TRP ASN SER GLY THR SER THR LEU THR ILE THR SEQRES 22 B 320 VAL ASN SER LYS LYS THR LYS ASP LEU VAL PHE THR SER SEQRES 23 B 320 SER ASN THR ILE THR VAL GLN GLN TYR ASP SER ASN GLY SEQRES 24 B 320 THR SER LEU GLU GLY SER ALA VAL GLU ILE THR LYS LEU SEQRES 25 B 320 ASP GLU ILE LYS ASN ALA LEU LYS HET 1PE A 800 7 HET 1PE A 802 16 HET 1PE B 801 13 HET 1PE B 803 13 HET 1PE B 804 13 HET 1PE B 805 9 HET 1PE B 806 9 HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 3 1PE 7(C10 H22 O6) FORMUL 10 HOH *517(H2 O) HELIX 1 1 LYS A 333 LYS A 342 1 10 HELIX 2 2 PRO B 35 SER B 37 5 3 HELIX 3 3 SER B 287 THR B 289 5 3 HELIX 4 4 LYS B 333 LEU B 341 1 9 SHEET 1 A22 SER A 29 LEU A 34 0 SHEET 2 A22 MET A 38 SER A 43 -1 O VAL A 40 N VAL A 32 SHEET 3 A22 TYR A 52 VAL A 58 -1 O ILE A 55 N LEU A 41 SHEET 4 A22 LEU A 61 SER A 67 -1 O LEU A 63 N ALA A 56 SHEET 5 A22 GLY A 74 VAL A 79 -1 O GLU A 77 N SER A 64 SHEET 6 A22 LYS A 85 ILE A 90 -1 O ILE A 90 N GLY A 74 SHEET 7 A22 GLN A 96 PHE A 102 -1 O PHE A 102 N LYS A 85 SHEET 8 A22 LEU A 109 SER A 116 -1 O VAL A 110 N VAL A 101 SHEET 9 A22 SER A 121 PHE A 126 -1 O GLU A 124 N LYS A 112 SHEET 10 A22 LEU A 132 THR A 138 -1 O TYR A 136 N TYR A 123 SHEET 11 A22 SER A 144 PHE A 149 -1 O PHE A 149 N SER A 133 SHEET 12 A22 LEU A 155 THR A 161 -1 O SER A 156 N LEU A 148 SHEET 13 A22 SER A 167 PHE A 172 -1 O GLU A 170 N LYS A 158 SHEET 14 A22 LEU A 178 THR A 184 -1 O SER A 179 N LEU A 171 SHEET 15 A22 SER A 190 PHE A 195 -1 O GLU A 193 N LYS A 181 SHEET 16 A22 LEU A 201 THR A 207 -1 O THR A 207 N SER A 190 SHEET 17 A22 ARG A 213 THR A 217 -1 O TYR A 216 N LYS A 204 SHEET 18 A22 GLY A 225 VAL A 230 -1 O LYS A 226 N THR A 217 SHEET 19 A22 VAL A 235 LEU A 240 -1 O LEU A 236 N GLU A 229 SHEET 20 A22 LYS A 244 GLU A 251 -1 O THR A 246 N THR A 239 SHEET 21 A22 VAL A 254 SER A 261 -1 O LYS A 258 N LEU A 247 SHEET 22 A22 VAL A 266 ASP A 272 -1 O SER A 267 N ASN A 259 SHEET 1 B 5 LYS A 281 ASN A 286 0 SHEET 2 B 5 THR A 291 VAL A 296 -1 O THR A 295 N THR A 282 SHEET 3 B 5 LYS A 299 PHE A 306 -1 O LEU A 304 N LEU A 292 SHEET 4 B 5 ILE A 312 GLN A 316 -1 O GLN A 315 N ASP A 303 SHEET 5 B 5 VAL A 329 ILE A 331 -1 O ILE A 331 N ILE A 312 SHEET 1 C22 VAL B 30 ASP B 33 0 SHEET 2 C22 LYS B 39 SER B 46 -1 O VAL B 40 N VAL B 32 SHEET 3 C22 TYR B 52 VAL B 58 -1 O ILE B 55 N LEU B 41 SHEET 4 C22 LEU B 61 SER B 67 -1 O LEU B 63 N ALA B 56 SHEET 5 C22 GLY B 74 VAL B 79 -1 O GLU B 77 N SER B 64 SHEET 6 C22 LYS B 85 ILE B 90 -1 O ILE B 90 N GLY B 74 SHEET 7 C22 GLN B 96 PHE B 102 -1 O PHE B 102 N LYS B 85 SHEET 8 C22 LEU B 109 SER B 116 -1 O LYS B 113 N LEU B 99 SHEET 9 C22 SER B 121 PHE B 126 -1 O GLU B 124 N LYS B 112 SHEET 10 C22 LEU B 132 THR B 138 -1 O SER B 133 N LEU B 125 SHEET 11 C22 SER B 144 PHE B 149 -1 O GLU B 147 N LYS B 135 SHEET 12 C22 LEU B 155 THR B 161 -1 O PHE B 157 N LEU B 148 SHEET 13 C22 SER B 167 PHE B 172 -1 O GLU B 170 N LYS B 158 SHEET 14 C22 LEU B 178 THR B 184 -1 O SER B 179 N LEU B 171 SHEET 15 C22 SER B 190 PHE B 195 -1 O THR B 191 N ILE B 183 SHEET 16 C22 LEU B 201 THR B 207 -1 O SER B 202 N LEU B 194 SHEET 17 C22 ARG B 213 THR B 217 -1 O LEU B 214 N ILE B 206 SHEET 18 C22 GLY B 225 LEU B 231 -1 O LYS B 228 N GLU B 215 SHEET 19 C22 TYR B 234 THR B 241 -1 O LEU B 236 N GLU B 229 SHEET 20 C22 LYS B 244 GLU B 251 -1 O VAL B 248 N GLU B 237 SHEET 21 C22 VAL B 254 ILE B 260 -1 O LEU B 256 N VAL B 249 SHEET 22 C22 VAL B 266 ASP B 272 -1 O SER B 267 N ASN B 259 SHEET 1 D 5 LYS B 281 ASN B 286 0 SHEET 2 D 5 THR B 291 VAL B 296 -1 O THR B 295 N THR B 282 SHEET 3 D 5 LYS B 299 PHE B 306 -1 O THR B 301 N ILE B 294 SHEET 4 D 5 ILE B 312 GLN B 316 -1 O GLN B 315 N ASP B 303 SHEET 5 D 5 VAL B 329 GLU B 330 -1 O VAL B 329 N VAL B 314 SITE 1 AC1 2 ASP A 210 GLY A 211 SITE 1 AC2 12 GLU A 193 LEU A 201 LYS A 204 TYR A 216 SITE 2 AC2 12 LEU A 240 LYS A 262 LYS B 44 SER B 45 SITE 3 AC2 12 SER B 46 GLY B 50 TYR B 52 HOH B 990 SITE 1 AC3 2 TYR A 123 HOH B1180 SITE 1 AC4 4 LYS B 113 SER B 121 TYR B 123 1PE B 804 SITE 1 AC5 4 PHE B 134 TYR B 136 TYR B 146 1PE B 803 SITE 1 AC6 7 LYS B 204 ILE B 206 TYR B 216 SER B 261 SITE 2 AC6 7 LYS B 262 GLY B 264 HOH B1107 SITE 1 AC7 5 ASP B 210 GLY B 211 ARG B 213 VAL B 230 SITE 2 AC7 5 LEU B 231 CRYST1 75.293 83.647 106.153 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013281 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011955 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009420 0.00000