PDB Short entry for 3CLD HEADER TRANSCRIPTION 18-MAR-08 3CLD TITLE LIGAND BINDING DOMAIN OF THE GLUCOCORTICOID RECEPTOR COMPLEXED WITH TITLE 2 FLUTICAZONE FUROATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOCORTICOID RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN, UNP RESIDUES 521-777; COMPND 5 SYNONYM: GR, NUCLEAR RECEPTOR SUBFAMILY 3 GROUP C MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TIF2 COACTIVATOR MOTIF; COMPND 10 CHAIN: H, C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: NR3C1, GRL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED, THE SEQUENCE SOURCE 12 CAN BE FOUND IN HOMO SAPIENS (HUMAN) KEYWDS GLUCOCORTICOID RECEPTOR, GR, NUCLEAR RECEPTOR, ALTERNATIVE KEYWDS 2 INITIATION, CHROMATIN REGULATOR, DISEASE MUTATION, DNA-BINDING, KEYWDS 3 LIPID-BINDING, METAL-BINDING, NUCLEUS, PHOSPHOPROTEIN, KEYWDS 4 PSEUDOHERMAPHRODITISM, STEROID-BINDING, TRANSCRIPTION, TRANSCRIPTION KEYWDS 5 REGULATION, ZINC-FINGER EXPDTA X-RAY DIFFRACTION AUTHOR L.M.SHEWCHUK,I.MCLAY,E.STEWART,K.B.BIGGADIKE,A.M.HASSELL,R.K.BLEDSOE REVDAT 6 30-AUG-23 3CLD 1 REMARK REVDAT 5 20-OCT-21 3CLD 1 COMPND REMARK SEQADV HETNAM REVDAT 4 13-JUL-11 3CLD 1 VERSN REVDAT 3 24-FEB-09 3CLD 1 VERSN REVDAT 2 05-AUG-08 3CLD 1 JRNL REVDAT 1 24-JUN-08 3CLD 0 JRNL AUTH K.BIGGADIKE,R.K.BLEDSOE,A.M.HASSELL,B.E.KIRK,I.M.MCLAY, JRNL AUTH 2 L.M.SHEWCHUK,E.L.STEWART JRNL TITL X-RAY CRYSTAL STRUCTURE OF THE NOVEL ENHANCED-AFFINITY JRNL TITL 2 GLUCOCORTICOID AGONIST FLUTICASONE FUROATE IN THE JRNL TITL 3 GLUCOCORTICOID RECEPTOR-LIGAND BINDING DOMAIN. JRNL REF J.MED.CHEM. V. 51 3349 2008 JRNL REFN ISSN 0022-2623 JRNL PMID 18522385 JRNL DOI 10.1021/JM800279T REMARK 2 REMARK 2 RESOLUTION. 2.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 110.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 15786 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 850 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 994 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.4310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4002 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 20 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.93000 REMARK 3 B22 (A**2) : -3.93000 REMARK 3 B33 (A**2) : 5.90000 REMARK 3 B12 (A**2) : -1.97000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.396 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.303 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.070 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4170 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5676 ; 1.181 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 494 ; 4.335 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 167 ;34.981 ;24.251 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 726 ;15.010 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;11.944 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 662 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3048 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1986 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2978 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 111 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.136 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2564 ; 0.280 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4022 ; 0.529 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1835 ; 0.821 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1654 ; 1.422 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 528 A 776 REMARK 3 ORIGIN FOR THE GROUP (A): 41.3302 7.7967 0.3442 REMARK 3 T TENSOR REMARK 3 T11: -0.2746 T22: -0.3276 REMARK 3 T33: -0.5076 T12: 0.0355 REMARK 3 T13: 0.0011 T23: -0.0530 REMARK 3 L TENSOR REMARK 3 L11: 18.3175 L22: 6.2541 REMARK 3 L33: 1.9133 L12: 3.6290 REMARK 3 L13: 0.0791 L23: 0.2823 REMARK 3 S TENSOR REMARK 3 S11: 0.4089 S12: 0.2193 S13: 0.6620 REMARK 3 S21: 0.2972 S22: -0.2345 S23: 0.5502 REMARK 3 S31: -0.0048 S32: -0.1171 S33: -0.1744 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 528 B 776 REMARK 3 ORIGIN FOR THE GROUP (A): 42.1142 -3.1776 -37.2431 REMARK 3 T TENSOR REMARK 3 T11: -0.2227 T22: -0.3107 REMARK 3 T33: -0.4482 T12: -0.0283 REMARK 3 T13: 0.0577 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 16.9265 L22: 5.0462 REMARK 3 L33: 1.7572 L12: -2.4986 REMARK 3 L13: 0.0978 L23: 1.0113 REMARK 3 S TENSOR REMARK 3 S11: 0.2869 S12: -0.1087 S13: -0.4094 REMARK 3 S21: -0.3544 S22: -0.1927 S23: 0.7311 REMARK 3 S31: -0.1296 S32: -0.1449 S33: -0.0942 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 743 H 750 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4734 -11.2507 -4.9167 REMARK 3 T TENSOR REMARK 3 T11: -0.0566 T22: -0.1041 REMARK 3 T33: 0.6231 T12: 0.0086 REMARK 3 T13: -0.2745 T23: -0.3207 REMARK 3 L TENSOR REMARK 3 L11: 23.6894 L22: 21.9108 REMARK 3 L33: 20.3374 L12: 11.4354 REMARK 3 L13: 20.2736 L23: 2.7895 REMARK 3 S TENSOR REMARK 3 S11: 0.1600 S12: 2.1463 S13: -0.8063 REMARK 3 S21: -0.1010 S22: 0.9530 S23: -1.2169 REMARK 3 S31: 1.2410 S32: 0.1634 S33: -1.1130 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 743 C 750 REMARK 3 ORIGIN FOR THE GROUP (A): 38.0203 15.4808 -31.9867 REMARK 3 T TENSOR REMARK 3 T11: -0.0842 T22: 0.1420 REMARK 3 T33: 0.9894 T12: -0.1594 REMARK 3 T13: 0.2505 T23: -0.3833 REMARK 3 L TENSOR REMARK 3 L11: 7.2847 L22: 28.2300 REMARK 3 L33: 9.6141 L12: -9.2472 REMARK 3 L13: -3.7517 L23: -6.4932 REMARK 3 S TENSOR REMARK 3 S11: 0.2861 S12: -1.0300 S13: 1.4374 REMARK 3 S21: 0.0724 S22: 0.7028 S23: -0.7246 REMARK 3 S31: -0.8214 S32: 0.3308 S33: -0.9889 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CLD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15786 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840 REMARK 200 RESOLUTION RANGE LOW (A) : 110.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1M2Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BISTRISPROPANE, 2.2M NACL, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.92400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.84800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.88600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.81000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 12.96200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 519 REMARK 465 SER A 520 REMARK 465 VAL A 521 REMARK 465 PRO A 522 REMARK 465 ALA A 523 REMARK 465 THR A 524 REMARK 465 LEU A 525 REMARK 465 SER A 616 REMARK 465 SER A 617 REMARK 465 ALA A 618 REMARK 465 GLU A 705 REMARK 465 GLY A 706 REMARK 465 ASN A 707 REMARK 465 SER A 708 REMARK 465 SER A 709 REMARK 465 LYS A 777 REMARK 465 LYS H 740 REMARK 465 GLU H 741 REMARK 465 LYS H 751 REMARK 465 GLY B 519 REMARK 465 SER B 520 REMARK 465 VAL B 521 REMARK 465 PRO B 522 REMARK 465 ALA B 523 REMARK 465 THR B 524 REMARK 465 LEU B 525 REMARK 465 PRO B 526 REMARK 465 GLN B 527 REMARK 465 SER B 616 REMARK 465 SER B 617 REMARK 465 ALA B 618 REMARK 465 GLU B 705 REMARK 465 GLY B 706 REMARK 465 ASN B 707 REMARK 465 SER B 708 REMARK 465 SER B 709 REMARK 465 LYS B 777 REMARK 465 LYS C 740 REMARK 465 GLU C 741 REMARK 465 LYS C 751 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 527 CG CD OE1 NE2 REMARK 470 GLU A 542 CG CD OE1 OE2 REMARK 470 LYS A 576 CG CD CE NZ REMARK 470 ARG A 585 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 614 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 615 CG CD OE1 NE2 REMARK 470 ASN A 619 CG OD1 ND2 REMARK 470 GLN A 710 CG CD OE1 NE2 REMARK 470 LYS A 743 CG CD CE NZ REMARK 470 SER A 746 OG REMARK 470 GLU A 755 CG CD OE1 OE2 REMARK 470 TYR A 764 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 765 OG REMARK 470 ASN A 766 CG OD1 ND2 REMARK 470 ASN A 768 CG OD1 ND2 REMARK 470 ARG H 746 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 542 CG CD OE1 OE2 REMARK 470 TRP B 557 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 557 CZ3 CH2 REMARK 470 ARG B 585 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 614 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 615 CG CD OE1 NE2 REMARK 470 ASN B 619 CG OD1 ND2 REMARK 470 GLU B 631 CG CD OE1 OE2 REMARK 470 LYS B 703 CG CD CE NZ REMARK 470 GLN B 710 CG CD OE1 NE2 REMARK 470 LYS B 743 CG CD CE NZ REMARK 470 SER B 746 OG REMARK 470 GLU B 755 CG CD OE1 OE2 REMARK 470 SER B 765 OG REMARK 470 ASN B 766 CG OD1 ND2 REMARK 470 ASN B 768 CG OD1 ND2 REMARK 470 ARG C 746 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 631 CD GLU A 631 OE1 0.072 REMARK 500 GLN B 632 CD GLN B 632 OE1 0.133 REMARK 500 GLN B 632 CD GLN B 632 NE2 0.193 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 585 -6.50 -55.73 REMARK 500 ASP A 678 35.68 -90.90 REMARK 500 SER A 682 53.37 -114.23 REMARK 500 SER A 765 30.74 -95.61 REMARK 500 ASN A 766 -36.08 -138.55 REMARK 500 SER B 682 46.10 -94.34 REMARK 500 SER B 746 46.35 -90.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GW6 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GW6 B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M2Z RELATED DB: PDB DBREF 3CLD A 521 777 UNP P04150 GCR_HUMAN 521 777 DBREF 3CLD B 521 777 UNP P04150 GCR_HUMAN 521 777 DBREF 3CLD H 740 751 PDB 3CLD 3CLD 740 751 DBREF 3CLD C 740 751 PDB 3CLD 3CLD 740 751 SEQADV 3CLD GLY A 519 UNP P04150 EXPRESSION TAG SEQADV 3CLD SER A 520 UNP P04150 EXPRESSION TAG SEQADV 3CLD TYR A 602 UNP P04150 PHE 602 ENGINEERED MUTATION SEQADV 3CLD GLY A 638 UNP P04150 CYS 638 ENGINEERED MUTATION SEQADV 3CLD GLY B 519 UNP P04150 EXPRESSION TAG SEQADV 3CLD SER B 520 UNP P04150 EXPRESSION TAG SEQADV 3CLD TYR B 602 UNP P04150 PHE 602 ENGINEERED MUTATION SEQADV 3CLD GLY B 638 UNP P04150 CYS 638 ENGINEERED MUTATION SEQRES 1 A 259 GLY SER VAL PRO ALA THR LEU PRO GLN LEU THR PRO THR SEQRES 2 A 259 LEU VAL SER LEU LEU GLU VAL ILE GLU PRO GLU VAL LEU SEQRES 3 A 259 TYR ALA GLY TYR ASP SER SER VAL PRO ASP SER THR TRP SEQRES 4 A 259 ARG ILE MET THR THR LEU ASN MET LEU GLY GLY ARG GLN SEQRES 5 A 259 VAL ILE ALA ALA VAL LYS TRP ALA LYS ALA ILE PRO GLY SEQRES 6 A 259 PHE ARG ASN LEU HIS LEU ASP ASP GLN MET THR LEU LEU SEQRES 7 A 259 GLN TYR SER TRP MET TYR LEU MET ALA PHE ALA LEU GLY SEQRES 8 A 259 TRP ARG SER TYR ARG GLN SER SER ALA ASN LEU LEU CYS SEQRES 9 A 259 PHE ALA PRO ASP LEU ILE ILE ASN GLU GLN ARG MET THR SEQRES 10 A 259 LEU PRO GLY MET TYR ASP GLN CYS LYS HIS MET LEU TYR SEQRES 11 A 259 VAL SER SER GLU LEU HIS ARG LEU GLN VAL SER TYR GLU SEQRES 12 A 259 GLU TYR LEU CYS MET LYS THR LEU LEU LEU LEU SER SER SEQRES 13 A 259 VAL PRO LYS ASP GLY LEU LYS SER GLN GLU LEU PHE ASP SEQRES 14 A 259 GLU ILE ARG MET THR TYR ILE LYS GLU LEU GLY LYS ALA SEQRES 15 A 259 ILE VAL LYS ARG GLU GLY ASN SER SER GLN ASN TRP GLN SEQRES 16 A 259 ARG PHE TYR GLN LEU THR LYS LEU LEU ASP SER MET HIS SEQRES 17 A 259 GLU VAL VAL GLU ASN LEU LEU ASN TYR CYS PHE GLN THR SEQRES 18 A 259 PHE LEU ASP LYS THR MET SER ILE GLU PHE PRO GLU MET SEQRES 19 A 259 LEU ALA GLU ILE ILE THR ASN GLN ILE PRO LYS TYR SER SEQRES 20 A 259 ASN GLY ASN ILE LYS LYS LEU LEU PHE HIS GLN LYS SEQRES 1 H 12 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS SEQRES 1 B 259 GLY SER VAL PRO ALA THR LEU PRO GLN LEU THR PRO THR SEQRES 2 B 259 LEU VAL SER LEU LEU GLU VAL ILE GLU PRO GLU VAL LEU SEQRES 3 B 259 TYR ALA GLY TYR ASP SER SER VAL PRO ASP SER THR TRP SEQRES 4 B 259 ARG ILE MET THR THR LEU ASN MET LEU GLY GLY ARG GLN SEQRES 5 B 259 VAL ILE ALA ALA VAL LYS TRP ALA LYS ALA ILE PRO GLY SEQRES 6 B 259 PHE ARG ASN LEU HIS LEU ASP ASP GLN MET THR LEU LEU SEQRES 7 B 259 GLN TYR SER TRP MET TYR LEU MET ALA PHE ALA LEU GLY SEQRES 8 B 259 TRP ARG SER TYR ARG GLN SER SER ALA ASN LEU LEU CYS SEQRES 9 B 259 PHE ALA PRO ASP LEU ILE ILE ASN GLU GLN ARG MET THR SEQRES 10 B 259 LEU PRO GLY MET TYR ASP GLN CYS LYS HIS MET LEU TYR SEQRES 11 B 259 VAL SER SER GLU LEU HIS ARG LEU GLN VAL SER TYR GLU SEQRES 12 B 259 GLU TYR LEU CYS MET LYS THR LEU LEU LEU LEU SER SER SEQRES 13 B 259 VAL PRO LYS ASP GLY LEU LYS SER GLN GLU LEU PHE ASP SEQRES 14 B 259 GLU ILE ARG MET THR TYR ILE LYS GLU LEU GLY LYS ALA SEQRES 15 B 259 ILE VAL LYS ARG GLU GLY ASN SER SER GLN ASN TRP GLN SEQRES 16 B 259 ARG PHE TYR GLN LEU THR LYS LEU LEU ASP SER MET HIS SEQRES 17 B 259 GLU VAL VAL GLU ASN LEU LEU ASN TYR CYS PHE GLN THR SEQRES 18 B 259 PHE LEU ASP LYS THR MET SER ILE GLU PHE PRO GLU MET SEQRES 19 B 259 LEU ALA GLU ILE ILE THR ASN GLN ILE PRO LYS TYR SER SEQRES 20 B 259 ASN GLY ASN ILE LYS LYS LEU LEU PHE HIS GLN LYS SEQRES 1 C 12 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS HET GW6 A 1 37 HET GW6 B 2 37 HETNAM GW6 (6ALPHA,11ALPHA,14BETA,16ALPHA,17ALPHA)-6,9-DIFLUORO- HETNAM 2 GW6 17-{[(FLUOROMETHYL)SULFANYL]CARBONYL}-11-HYDROXY-16- HETNAM 3 GW6 METHYL-3-OXOAN DROSTA-1,4-DIEN-17-YL FURAN-2- HETNAM 4 GW6 CARBOXYLATE HETSYN GW6 FLUTICASONE FUROATE FORMUL 5 GW6 2(C27 H29 F3 O6 S) FORMUL 7 HOH *20(H2 O) HELIX 1 1 THR A 531 GLU A 540 1 10 HELIX 2 2 SER A 555 ALA A 580 1 26 HELIX 3 3 GLY A 583 LEU A 587 5 5 HELIX 4 4 HIS A 588 GLN A 615 1 28 HELIX 5 5 ASN A 630 THR A 635 1 6 HELIX 6 6 MET A 639 LEU A 656 1 18 HELIX 7 7 SER A 659 LEU A 671 1 13 HELIX 8 8 SER A 682 ARG A 704 1 23 HELIX 9 9 GLN A 710 SER A 724 1 15 HELIX 10 10 SER A 724 ASP A 742 1 19 HELIX 11 11 LYS A 743 SER A 746 5 4 HELIX 12 12 PRO A 750 SER A 765 1 16 HELIX 13 13 ASN H 742 LEU H 749 1 8 HELIX 14 14 THR B 531 GLU B 540 1 10 HELIX 15 15 SER B 555 LYS B 579 1 25 HELIX 16 16 GLY B 583 LEU B 587 5 5 HELIX 17 17 HIS B 588 ARG B 614 1 27 HELIX 18 18 ASN B 630 THR B 635 1 6 HELIX 19 19 GLY B 638 GLN B 657 1 20 HELIX 20 20 SER B 659 LEU B 671 1 13 HELIX 21 21 SER B 682 LYS B 703 1 22 HELIX 22 22 GLN B 710 ASP B 742 1 33 HELIX 23 23 PRO B 750 ASN B 766 1 17 HELIX 24 24 ASN C 742 LEU C 749 1 8 SHEET 1 A 2 LEU A 621 ALA A 624 0 SHEET 2 A 2 LEU A 627 ILE A 629 -1 O ILE A 629 N LEU A 621 SHEET 1 B 2 SER A 674 PRO A 676 0 SHEET 2 B 2 ILE A 769 LYS A 771 -1 O LYS A 770 N VAL A 675 SHEET 1 C 2 LEU B 621 ALA B 624 0 SHEET 2 C 2 LEU B 627 ILE B 629 -1 O ILE B 629 N LEU B 621 SHEET 1 D 2 SER B 674 PRO B 676 0 SHEET 2 D 2 ILE B 769 LYS B 771 -1 O LYS B 770 N VAL B 675 SITE 1 AC1 17 MET A 560 LEU A 563 ASN A 564 GLY A 567 SITE 2 AC1 17 GLN A 570 MET A 604 ALA A 605 ARG A 611 SITE 3 AC1 17 PHE A 623 MET A 639 GLN A 642 CYS A 643 SITE 4 AC1 17 LEU A 732 TYR A 735 CYS A 736 THR A 739 SITE 5 AC1 17 PHE A 749 SITE 1 AC2 17 MET B 560 LEU B 563 ASN B 564 GLY B 567 SITE 2 AC2 17 GLN B 570 MET B 601 MET B 604 ALA B 605 SITE 3 AC2 17 ARG B 611 PHE B 623 MET B 639 GLN B 642 SITE 4 AC2 17 LEU B 732 TYR B 735 CYS B 736 THR B 739 SITE 5 AC2 17 PHE B 749 CRYST1 127.340 127.340 77.772 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007853 0.004534 0.000000 0.00000 SCALE2 0.000000 0.009068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012858 0.00000