PDB Short entry for 3CVW
HEADER    LYASE/DNA                               20-APR-08   3CVW              
TITLE     DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE H365N MUTANT BOUND TO DS DNA 
TITLE    2 WITH A T-T (6-4) PHOTOLESION AND COFACTOR F0                         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-D(*DAP*DCP*DAP*DGP*DCP*DGP*DGP*(64T)P*(5PY)        
COMPND   3 P*DGP*DCP*DAP*DGP*DGP*DT)-3');                                       
COMPND   4 CHAIN: C;                                                            
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 OTHER_DETAILS: DNA WITH (6-4) PHOTOLESION;                           
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: DNA (5'-                                                   
COMPND   9 D(*DTP*DAP*DCP*DCP*DTP*DGP*DCP*DAP*DAP*DCP*DCP*DGP*DCP*DTP*DG)-3');  
COMPND  10 CHAIN: D;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: RE11660P;                                                  
COMPND  14 CHAIN: A;                                                            
COMPND  15 ENGINEERED: YES;                                                     
COMPND  16 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 MOL_ID: 2;                                                           
SOURCE   4 SYNTHETIC: YES;                                                      
SOURCE   5 MOL_ID: 3;                                                           
SOURCE   6 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;                        
SOURCE   7 ORGANISM_TAXID: 7227;                                                
SOURCE   8 GENE: PHR64-520;                                                     
SOURCE   9 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  10 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  11 EXPRESSION_SYSTEM_STRAIN: ROSETTA-GAMI PLYSS (DE-3);                 
SOURCE  12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  13 EXPRESSION_SYSTEM_PLASMID: DERIVED FROM PDEST007                     
KEYWDS    DNA REPAIR, LYASE-DNA COMPLEX                                         
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.J.MAUL,T.R.M.BARENDS,A.F.GLAS,M.J.CRYLE,I.SCHLICHTING,T.CARELL      
REVDAT   3   20-OCT-21 3CVW    1       REMARK SEQADV LINK                       
REVDAT   2   25-OCT-17 3CVW    1       REMARK                                   
REVDAT   1   13-OCT-09 3CVW    0                                                
JRNL        AUTH   M.J.MAUL,T.BARENDS,A.F.GLAS,M.J.CRYLE,S.SCHNEIDER,           
JRNL        AUTH 2 T.DOMRATCHEVA,I.SCHLICHTING,T.CARELL                         
JRNL        TITL   STRUCTURE AND MECHANISM OF A COFACTOR F0 ACCELERATED (6-4)   
JRNL        TITL 2 PHOTOLYASE FROM THE FRUIT FLY                                
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    3.20 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0005                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 19.87                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 93.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 10463                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.275                           
REMARK   3   R VALUE            (WORKING SET) : 0.272                           
REMARK   3   FREE R VALUE                     : 0.329                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 549                             
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 3.20                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 3.28                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 457                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 59.56                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3460                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 29                           
REMARK   3   BIN FREE R VALUE                    : 0.3670                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4117                                    
REMARK   3   NUCLEIC ACID ATOMS       : 609                                     
REMARK   3   HETEROGEN ATOMS          : 79                                      
REMARK   3   SOLVENT ATOMS            : 12                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 65.50                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 49.85                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -3.23000                                             
REMARK   3    B22 (A**2) : -1.04000                                             
REMARK   3    B33 (A**2) : 4.27000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): NULL          
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.745         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.594         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.355        
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.860                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.792                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  5008 ; 0.005 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  6934 ; 0.881 ; 2.126       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   501 ; 4.166 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   206 ;32.890 ;23.058       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   725 ;13.632 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    35 ;11.565 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   725 ; 0.054 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3625 ; 0.000 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  2305 ; 0.152 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  3342 ; 0.294 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   135 ; 0.114 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    33 ; 0.098 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):     5 ; 0.067 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3CVW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-08.                  
REMARK 100 THE DEPOSITION ID IS D_1000047275.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 22-FEB-08                          
REMARK 200  TEMPERATURE           (KELVIN) : NULL                               
REMARK 200  PH                             : 8.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X10SA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97895                            
REMARK 200  MONOCHROMATOR                  : SI(111)                            
REMARK 200  OPTICS                         : DYNAMICALLY BENDABLE MIRROR        
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 225 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 10625                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 3.200                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 89.2                               
REMARK 200  DATA REDUNDANCY                : 5.700                              
REMARK 200  R MERGE                    (I) : 0.08900                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.8000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 3.30                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 52.2                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.30800                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.100                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS            
REMARK 200 SOFTWARE USED: REFMAC                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 48.72                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 15-25% PEG1500, 0.1 M MIB, PH 8.6,       
REMARK 280  VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       43.23500            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       44.67000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       44.75500            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       44.67000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       43.23500            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       44.75500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5680 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 24910 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   -22                                                      
REMARK 465     ALA A   -21                                                      
REMARK 465     SER A   -20                                                      
REMARK 465     TRP A   -19                                                      
REMARK 465     SER A   -18                                                      
REMARK 465     HIS A   -17                                                      
REMARK 465     PRO A   -16                                                      
REMARK 465     GLN A   -15                                                      
REMARK 465     PHE A   -14                                                      
REMARK 465     GLU A   -13                                                      
REMARK 465     LYS A   -12                                                      
REMARK 465     GLY A   -11                                                      
REMARK 465     ALA A   -10                                                      
REMARK 465     SER A    -9                                                      
REMARK 465     THR A    -8                                                      
REMARK 465     SER A    -7                                                      
REMARK 465     LEU A    -6                                                      
REMARK 465     TYR A    -5                                                      
REMARK 465     LYS A    -4                                                      
REMARK 465     LYS A    -3                                                      
REMARK 465     ALA A    -2                                                      
REMARK 465     GLY A    -1                                                      
REMARK 465     LEU A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     ASP A     2                                                      
REMARK 465     SER A     3                                                      
REMARK 465     THR A   506                                                      
REMARK 465     GLY A   507                                                      
REMARK 465     LYS A   508                                                      
REMARK 465     GLU A   509                                                      
REMARK 465     GLU A   510                                                      
REMARK 465     GLU A   511                                                      
REMARK 465     SER A   512                                                      
REMARK 465     SER A   513                                                      
REMARK 465     PHE A   514                                                      
REMARK 465     GLU A   515                                                      
REMARK 465     GLU A   516                                                      
REMARK 465     LYS A   517                                                      
REMARK 465     SER A   518                                                      
REMARK 465     GLU A   519                                                      
REMARK 465     THR A   520                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC C   2   O4' -  C1' -  N1  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DG C  13   O4' -  C1' -  N9  ANGL. DEV. =   3.6 DEGREES          
REMARK 500     DG C  14   O4' -  C4' -  C3' ANGL. DEV. =  -2.5 DEGREES          
REMARK 500     DG C  14   O4' -  C1' -  N9  ANGL. DEV. =   2.7 DEGREES          
REMARK 500     DT C  15   O4' -  C1' -  N1  ANGL. DEV. =   1.8 DEGREES          
REMARK 500     DT D   1   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500     DC D   3   O4' -  C1' -  N1  ANGL. DEV. =   4.5 DEGREES          
REMARK 500     DC D   4   O4' -  C1' -  N1  ANGL. DEV. =   2.9 DEGREES          
REMARK 500     DT D   5   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DA D   9   O4' -  C4' -  C3' ANGL. DEV. =  -2.5 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A  13      -78.52   -138.56                                   
REMARK 500    ASN A  79       15.95     59.06                                   
REMARK 500    SER A  80     -151.44   -117.21                                   
REMARK 500    ARG A 101       72.60     63.48                                   
REMARK 500    ASN A 151       41.88   -101.07                                   
REMARK 500    GLN A 168       35.79    -98.37                                   
REMARK 500    ASP A 190     -169.15    -78.42                                   
REMARK 500    ALA A 198       35.12    -93.79                                   
REMARK 500    ASN A 315       34.01    -95.74                                   
REMARK 500    PRO A 329       87.29    -69.88                                   
REMARK 500    HIS A 333       80.58   -162.44                                   
REMARK 500    THR A 376     -121.84    -92.77                                   
REMARK 500    ASP A 379      -66.51   -125.15                                   
REMARK 500    GLN A 398      105.30    -47.91                                   
REMARK 500    PHE A 415      -56.13     62.30                                   
REMARK 500    VAL A 443       76.40   -119.54                                   
REMARK 500    CYS A 453       28.64   -152.86                                   
REMARK 500    THR A 474      -68.44   -107.62                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 521                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FO1 A 1422                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3CVU   RELATED DB: PDB                                   
REMARK 900 DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO DS DNA WITH A T-T  
REMARK 900 (6-4) PHOTOLESION                                                    
REMARK 900 RELATED ID: 3CVV   RELATED DB: PDB                                   
REMARK 900 DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO DS DNA WITH A T-T  
REMARK 900 (6-4) PHOTOLESION AND F0 COFACTOR                                    
REMARK 900 RELATED ID: 3CVX   RELATED DB: PDB                                   
REMARK 900 DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE H369M MUTANT BOUND TO DS    
REMARK 900 DNA WITH A T-T (6-4) PHOTOLESION                                     
REMARK 900 RELATED ID: 3CVY   RELATED DB: PDB                                   
REMARK 900 DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO REPAIRED DS DNA    
DBREF  3CVW A    1   520  UNP    Q8SXK5   Q8SXK5_DROME     1    520             
DBREF  3CVW C    1    15  PDB    3CVW     3CVW             1     15             
DBREF  3CVW D    1    15  PDB    3CVW     3CVW             1     15             
SEQADV 3CVW MET A  -22  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW ALA A  -21  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW SER A  -20  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW TRP A  -19  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW SER A  -18  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW HIS A  -17  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW PRO A  -16  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW GLN A  -15  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW PHE A  -14  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW GLU A  -13  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW LYS A  -12  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW GLY A  -11  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW ALA A  -10  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW SER A   -9  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW THR A   -8  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW SER A   -7  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW LEU A   -6  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW TYR A   -5  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW LYS A   -4  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW LYS A   -3  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW ALA A   -2  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW GLY A   -1  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW LEU A    0  UNP  Q8SXK5              EXPRESSION TAG                 
SEQADV 3CVW ASN A  365  UNP  Q8SXK5    HIS   365 ENGINEERED MUTATION            
SEQRES   1 C   15   DA  DC  DA  DG  DC  DG  DG 64T 5PY  DG  DC  DA  DG          
SEQRES   2 C   15   DG  DT                                                      
SEQRES   1 D   15   DT  DA  DC  DC  DT  DG  DC  DA  DA  DC  DC  DG  DC          
SEQRES   2 D   15   DT  DG                                                      
SEQRES   1 A  543  MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA          
SEQRES   2 A  543  SER THR SER LEU TYR LYS LYS ALA GLY LEU MET ASP SER          
SEQRES   3 A  543  GLN ARG SER THR LEU VAL HIS TRP PHE ARG LYS GLY LEU          
SEQRES   4 A  543  ARG LEU HIS ASP ASN PRO ALA LEU SER HIS ILE PHE THR          
SEQRES   5 A  543  ALA ALA ASN ALA ALA PRO GLY ARG TYR PHE VAL ARG PRO          
SEQRES   6 A  543  ILE PHE ILE LEU ASP PRO GLY ILE LEU ASP TRP MET GLN          
SEQRES   7 A  543  VAL GLY ALA ASN ARG TRP ARG PHE LEU GLN GLN THR LEU          
SEQRES   8 A  543  GLU ASP LEU ASP ASN GLN LEU ARG LYS LEU ASN SER ARG          
SEQRES   9 A  543  LEU PHE VAL VAL ARG GLY LYS PRO ALA GLU VAL PHE PRO          
SEQRES  10 A  543  ARG ILE PHE LYS SER TRP ARG VAL GLU MET LEU THR PHE          
SEQRES  11 A  543  GLU THR ASP ILE GLU PRO TYR SER VAL THR ARG ASP ALA          
SEQRES  12 A  543  ALA VAL GLN LYS LEU ALA LYS ALA GLU GLY VAL ARG VAL          
SEQRES  13 A  543  GLU THR HIS CYS SER HIS THR ILE TYR ASN PRO GLU LEU          
SEQRES  14 A  543  VAL ILE ALA LYS ASN LEU GLY LYS ALA PRO ILE THR TYR          
SEQRES  15 A  543  GLN LYS PHE LEU GLY ILE VAL GLU GLN LEU LYS VAL PRO          
SEQRES  16 A  543  LYS VAL LEU GLY VAL PRO GLU LYS LEU LYS ASN MET PRO          
SEQRES  17 A  543  THR PRO PRO LYS ASP GLU VAL GLU GLN LYS ASP SER ALA          
SEQRES  18 A  543  ALA TYR ASP CYS PRO THR MET LYS GLN LEU VAL LYS ARG          
SEQRES  19 A  543  PRO GLU GLU LEU GLY PRO ASN LYS PHE PRO GLY GLY GLU          
SEQRES  20 A  543  THR GLU ALA LEU ARG ARG MET GLU GLU SER LEU LYS ASP          
SEQRES  21 A  543  GLU ILE TRP VAL ALA ARG PHE GLU LYS PRO ASN THR ALA          
SEQRES  22 A  543  PRO ASN SER LEU GLU PRO SER THR THR VAL LEU SER PRO          
SEQRES  23 A  543  TYR LEU LYS PHE GLY CYS LEU SER ALA ARG LEU PHE ASN          
SEQRES  24 A  543  GLN LYS LEU LYS GLU ILE ILE LYS ARG GLN PRO LYS HIS          
SEQRES  25 A  543  SER GLN PRO PRO VAL SER LEU ILE GLY GLN LEU MET TRP          
SEQRES  26 A  543  ARG GLU PHE TYR TYR THR VAL ALA ALA ALA GLU PRO ASN          
SEQRES  27 A  543  PHE ASP ARG MET LEU GLY ASN VAL TYR CYS MET GLN ILE          
SEQRES  28 A  543  PRO TRP GLN GLU HIS PRO ASP HIS LEU GLU ALA TRP THR          
SEQRES  29 A  543  HIS GLY ARG THR GLY TYR PRO PHE ILE ASP ALA ILE MET          
SEQRES  30 A  543  ARG GLN LEU ARG GLN GLU GLY TRP ILE HIS ASN LEU ALA          
SEQRES  31 A  543  ARG HIS ALA VAL ALA CYS PHE LEU THR ARG GLY ASP LEU          
SEQRES  32 A  543  TRP ILE SER TRP GLU GLU GLY GLN ARG VAL PHE GLU GLN          
SEQRES  33 A  543  LEU LEU LEU ASP GLN ASP TRP ALA LEU ASN ALA GLY ASN          
SEQRES  34 A  543  TRP MET TRP LEU SER ALA SER ALA PHE PHE HIS GLN TYR          
SEQRES  35 A  543  PHE ARG VAL TYR SER PRO VAL ALA PHE GLY LYS LYS THR          
SEQRES  36 A  543  ASP PRO GLN GLY HIS TYR ILE ARG LYS TYR VAL PRO GLU          
SEQRES  37 A  543  LEU SER LYS TYR PRO ALA GLY CYS ILE TYR GLU PRO TRP          
SEQRES  38 A  543  LYS ALA SER LEU VAL ASP GLN ARG ALA TYR GLY CYS VAL          
SEQRES  39 A  543  LEU GLY THR ASP TYR PRO HIS ARG ILE VAL LYS HIS GLU          
SEQRES  40 A  543  VAL VAL HIS LYS GLU ASN ILE LYS ARG MET GLY ALA ALA          
SEQRES  41 A  543  TYR LYS VAL ASN ARG GLU VAL ARG THR GLY LYS GLU GLU          
SEQRES  42 A  543  GLU SER SER PHE GLU GLU LYS SER GLU THR                      
MODRES 3CVW 64T C    8   DT  5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE               
MODRES 3CVW 5PY C    9   DT                                                     
HET    64T  C   8      21                                                       
HET    5PY  C   9      19                                                       
HET    FAD  A 521      53                                                       
HET    FO1  A1422      26                                                       
HETNAM     64T 5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE                             
HETNAM     5PY 1-(2'-DEOXY-5'-O-PHOSPHONO-BETA-D-ERYTHRO-                       
HETNAM   2 5PY  PENTOFURANOSYL)-5-METHYLPYRIMIDIN-2(1H)-ONE                     
HETNAM     FAD FLAVIN-ADENINE DINUCLEOTIDE                                      
HETNAM     FO1 1-DEOXY-1-(8-HYDROXY-2,4-DIOXO-3,4-DIHYDROPYRIMIDO[4,5-          
HETNAM   2 FO1  B]QUINOLIN-10(2H)-YL)-D-RIBITOL                                 
HETSYN     FO1 7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN                       
FORMUL   1  64T    C10 H17 N2 O9 P                                              
FORMUL   1  5PY    C10 H15 N2 O7 P                                              
FORMUL   4  FAD    C27 H33 N9 O15 P2                                            
FORMUL   5  FO1    C16 H17 N3 O7                                                
FORMUL   6  HOH   *12(H2 O)                                                     
HELIX    1   1 ASN A   21  ALA A   34  1                                  14    
HELIX    2   2 GLY A   49  MET A   54  1                                   6    
HELIX    3   3 GLY A   57  LYS A   77  1                                  21    
HELIX    4   4 LYS A   88  ARG A  101  1                                  14    
HELIX    5   5 GLU A  112  GLU A  129  1                                  18    
HELIX    6   6 ASN A  143  ASN A  151  1                                   9    
HELIX    7   7 THR A  158  GLU A  167  1                                  10    
HELIX    8   8 ASP A  190  ASP A  196  1                                   7    
HELIX    9   9 THR A  204  VAL A  209  1                                   6    
HELIX   10  10 ARG A  211  LEU A  215  5                                   5    
HELIX   11  11 GLY A  223  LEU A  235  1                                  13    
HELIX   12  12 ASP A  237  ARG A  243  1                                   7    
HELIX   13  13 GLU A  245  THR A  249  5                                   5    
HELIX   14  14 LEU A  261  PHE A  267  1                                   7    
HELIX   15  15 SER A  271  ARG A  285  1                                  15    
HELIX   16  16 SER A  295  GLU A  313  1                                  19    
HELIX   17  17 HIS A  333  HIS A  342  1                                  10    
HELIX   18  18 TYR A  347  GLU A  360  1                                  14    
HELIX   19  19 HIS A  364  THR A  376  1                                  13    
HELIX   20  20 SER A  383  LEU A  395  1                                  13    
HELIX   21  21 ASP A  399  SER A  411  1                                  13    
HELIX   22  22 GLY A  436  VAL A  443  1                                   8    
HELIX   23  23 PRO A  444  SER A  447  5                                   4    
HELIX   24  24 GLU A  456  ALA A  460  5                                   5    
HELIX   25  25 SER A  461  TYR A  468  1                                   8    
HELIX   26  26 LYS A  482  ARG A  505  1                                  24    
SHEET    1   A 5 PHE A  83  ARG A  86  0                                        
SHEET    2   A 5 TYR A  38  LEU A  46  1  N  LEU A  46   O  VAL A  85           
SHEET    3   A 5 SER A   6  PHE A  12  1  N  PHE A  12   O  ILE A  43           
SHEET    4   A 5 VAL A 102  PHE A 107  1  O  THR A 106   N  TRP A  11           
SHEET    5   A 5 ARG A 132  VAL A 133  1  O  ARG A 132   N  GLU A 103           
LINK         O3'  DG C   7                 P   64T C   8     1555   1555  1.60  
LINK         O3' 64T C   8                 P   5PY C   9     1555   1555  1.61  
LINK         C6  64T C   8                 C4  5PY C   9     1555   1555  1.53  
LINK         O3' 5PY C   9                 P    DG C  10     1555   1555  1.60  
CISPEP   1 PRO A  292    PRO A  293          0         6.04                     
SITE     1 AC1 22 PHE A 244  LYS A 246  THR A 258  THR A 259                    
SITE     2 AC1 22 LEU A 261  SER A 262  LEU A 265  GLN A 299                    
SITE     3 AC1 22 TRP A 302  ARG A 303  TYR A 306  TRP A 362                    
SITE     4 AC1 22 ASN A 365  ARG A 368  HIS A 369  ASP A 397                    
SITE     5 AC1 22 GLN A 398  ASP A 399  LEU A 402  ASN A 403                    
SITE     6 AC1 22 ASN A 406  TRP A 407                                          
SITE     1 AC2 13 ARG A  13  LYS A  14  PHE A  44  ILE A  45                    
SITE     2 AC2 13 LEU A  46  ASP A  47  ILE A  50  MET A  54                    
SITE     3 AC2 13 ARG A  60  ASP A 110  GLU A 112  ARG A 118                    
SITE     4 AC2 13 LYS A 266                                                     
CRYST1   86.470   89.510   89.340  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.011565  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.011172  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011193        0.00000