PDB Short entry for 3CWR HEADER TRANSCRIPTION REGULATOR 22-APR-08 3CWR TITLE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR OF TETR FAMILY TITLE 2 (YP_425770.1) FROM RHODOSPIRILLUM RUBRUM ATCC 11170 AT 1.50 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, TETR FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOSPIRILLUM RUBRUM ATCC 11170; SOURCE 3 ORGANISM_TAXID: 269796; SOURCE 4 STRAIN: NCIB 8255; SOURCE 5 GENE: YP_425770.1, RRU_A0679; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_425770.1, TRANSCRIPTIONAL REGULATOR OF TETR FAMILY, BACTERIAL KEYWDS 2 REGULATORY PROTEINS, TETR FAMILY, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 3 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 4 DNA-BINDING, TRANSCRIPTION REGULATION, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3CWR 1 REMARK SEQADV REVDAT 5 24-JUL-19 3CWR 1 REMARK LINK REVDAT 4 25-OCT-17 3CWR 1 REMARK REVDAT 3 04-AUG-09 3CWR 1 REMARK REVDAT 2 24-FEB-09 3CWR 1 VERSN REVDAT 1 06-MAY-08 3CWR 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR OF TETR JRNL TITL 2 FAMILY (YP_425770.1) FROM RHODOSPIRILLUM RUBRUM ATCC 11170 JRNL TITL 3 AT 1.50 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 59383 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3001 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4058 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.1600 REMARK 3 BIN FREE R VALUE SET COUNT : 224 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2864 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 323 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.79000 REMARK 3 B22 (A**2) : 0.79000 REMARK 3 B33 (A**2) : -1.18000 REMARK 3 B12 (A**2) : 0.39000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.747 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3008 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2073 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4117 ; 1.593 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5038 ; 1.337 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 405 ; 3.342 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 120 ;33.856 ;22.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 484 ;11.279 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;17.683 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 482 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3384 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 611 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1959 ; 2.195 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 776 ; 1.201 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3135 ; 3.275 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1049 ; 5.159 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 968 ; 6.710 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5081 ; 2.944 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 327 ; 7.645 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5023 ; 4.397 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. EDO AND SO4 MOLECULES FROM THE CRYSTALLIZATION/CRYO SOLUTION REMARK 3 ARE MODELED. REMARK 4 REMARK 4 3CWR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047306. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-08; 23-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.79 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL11-1; BL1-5 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97852; 0.979137, 0.918381, REMARK 200 0.978532 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL; DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 1M LONG RH COATED BENT REMARK 200 CYLINDRICAL MIRROR FOR REMARK 200 HORIZONTAL AND VERTICAL FOCUSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD; ADSC REMARK 200 QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59433 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 29.285 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.36600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE WAS PHASED BY MAD METHODS AT 1.8 A REMARK 200 RESOLUTION AND REFINED AT 1.5 A RESOLUTION AGAINST A DATASET REMARK 200 COLLECTED FROM A DIFFERENT CRYSTAL. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 1.27M AMMONIUM SULFATE, 0.1M REMARK 280 MES PH 5.79, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K. REMARK 280 NANODROP, 1.18M AMMONIUM SULFATE, 0.1M MES PH 5.64, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 156.16000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.08000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 117.12000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 39.04000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 195.20000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUPPORTS THE ASSIGNMENT OF A DIMER REMARK 300 AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -39.04000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 ARG A 5 REMARK 465 ASN A 6 REMARK 465 ARG A 7 REMARK 465 GLY A 8 REMARK 465 ARG A 9 REMARK 465 PRO A 203 REMARK 465 GLY A 204 REMARK 465 ARG A 205 REMARK 465 GLU A 206 REMARK 465 ARG A 207 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 VAL B 2 REMARK 465 GLU B 3 REMARK 465 GLN B 4 REMARK 465 ARG B 5 REMARK 465 ASN B 6 REMARK 465 ARG B 7 REMARK 465 GLY B 8 REMARK 465 ARG B 9 REMARK 465 PRO B 10 REMARK 465 ALA B 11 REMARK 465 GLY B 78 REMARK 465 PHE B 79 REMARK 465 GLY B 204 REMARK 465 ARG B 205 REMARK 465 GLU B 206 REMARK 465 ARG B 207 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 79 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 82 OD1 OD2 REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 GLU A 159 CD OE1 OE2 REMARK 470 GLU B 80 CG CD OE1 OE2 REMARK 470 ARG B 92 NH1 NH2 REMARK 470 GLU B 133 CD OE1 OE2 REMARK 470 GLU B 159 CD OE1 OE2 REMARK 470 ARG B 199 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 163 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 79 110.38 -170.21 REMARK 500 PRO A 186 30.32 -95.65 REMARK 500 ILE A 201 -82.09 -87.67 REMARK 500 PRO B 186 32.24 -97.42 REMARK 500 ALA B 202 57.22 -146.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 209 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 379808 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3CWR A 1 207 UNP Q2RWL2 Q2RWL2_RHORT 1 207 DBREF 3CWR B 1 207 UNP Q2RWL2 Q2RWL2_RHORT 1 207 SEQADV 3CWR GLY A 0 UNP Q2RWL2 EXPRESSION TAG SEQADV 3CWR GLY B 0 UNP Q2RWL2 EXPRESSION TAG SEQRES 1 A 208 GLY MSE VAL GLU GLN ARG ASN ARG GLY ARG PRO ALA VAL SEQRES 2 A 208 PRO ASP ALA VAL VAL ARG GLU SER ILE VAL GLY ALA ALA SEQRES 3 A 208 GLN ARG LEU LEU SER SER GLY GLY ALA ALA ALA MSE THR SEQRES 4 A 208 MSE GLU GLY VAL ALA SER GLU ALA GLY ILE ALA LYS LYS SEQRES 5 A 208 THR LEU TYR ARG PHE ALA SER GLY ARG ALA ASP LEU ILE SEQRES 6 A 208 GLY LEU LEU VAL GLU SER TRP ILE ALA PRO ILE PHE PRO SEQRES 7 A 208 GLY PHE GLU ALA ASP PRO GLN ASP ALA ALA ALA ALA LEU SEQRES 8 A 208 GLU ARG ILE VAL TYR ASP ILE ALA GLN ALA VAL LEU SER SEQRES 9 A 208 ARG GLU ALA VAL SER LEU PHE ARG MSE LEU ALA SER ASP SEQRES 10 A 208 ALA ASP LEU ARG ASN ARG PHE LEU PRO ALA TYR ASN ALA SEQRES 11 A 208 ASN GLY ILE GLU ARG SER ARG ARG GLU LEU ALA ARG TRP SEQRES 12 A 208 LEU ASP GLN GLN ALA SER ALA GLY ARG LEU PRO LEU PRO SEQRES 13 A 208 ILE PRO ALA GLU ARG VAL ALA ASP LEU LEU LEU SER ALA SEQRES 14 A 208 VAL ILE ALA GLU PRO LEU ARG GLN ILE THR LEU GLY LEU SEQRES 15 A 208 ARG GLU PRO LEU PRO ALA TRP ASP ILE ALA PRO ARG VAL SEQRES 16 A 208 ALA ASP ALA VAL ARG LEU ILE ALA PRO GLY ARG GLU ARG SEQRES 1 B 208 GLY MSE VAL GLU GLN ARG ASN ARG GLY ARG PRO ALA VAL SEQRES 2 B 208 PRO ASP ALA VAL VAL ARG GLU SER ILE VAL GLY ALA ALA SEQRES 3 B 208 GLN ARG LEU LEU SER SER GLY GLY ALA ALA ALA MSE THR SEQRES 4 B 208 MSE GLU GLY VAL ALA SER GLU ALA GLY ILE ALA LYS LYS SEQRES 5 B 208 THR LEU TYR ARG PHE ALA SER GLY ARG ALA ASP LEU ILE SEQRES 6 B 208 GLY LEU LEU VAL GLU SER TRP ILE ALA PRO ILE PHE PRO SEQRES 7 B 208 GLY PHE GLU ALA ASP PRO GLN ASP ALA ALA ALA ALA LEU SEQRES 8 B 208 GLU ARG ILE VAL TYR ASP ILE ALA GLN ALA VAL LEU SER SEQRES 9 B 208 ARG GLU ALA VAL SER LEU PHE ARG MSE LEU ALA SER ASP SEQRES 10 B 208 ALA ASP LEU ARG ASN ARG PHE LEU PRO ALA TYR ASN ALA SEQRES 11 B 208 ASN GLY ILE GLU ARG SER ARG ARG GLU LEU ALA ARG TRP SEQRES 12 B 208 LEU ASP GLN GLN ALA SER ALA GLY ARG LEU PRO LEU PRO SEQRES 13 B 208 ILE PRO ALA GLU ARG VAL ALA ASP LEU LEU LEU SER ALA SEQRES 14 B 208 VAL ILE ALA GLU PRO LEU ARG GLN ILE THR LEU GLY LEU SEQRES 15 B 208 ARG GLU PRO LEU PRO ALA TRP ASP ILE ALA PRO ARG VAL SEQRES 16 B 208 ALA ASP ALA VAL ARG LEU ILE ALA PRO GLY ARG GLU ARG MODRES 3CWR MSE A 37 MET SELENOMETHIONINE MODRES 3CWR MSE A 39 MET SELENOMETHIONINE MODRES 3CWR MSE A 112 MET SELENOMETHIONINE MODRES 3CWR MSE B 37 MET SELENOMETHIONINE MODRES 3CWR MSE B 39 MET SELENOMETHIONINE MODRES 3CWR MSE B 112 MET SELENOMETHIONINE HET MSE A 37 8 HET MSE A 39 8 HET MSE A 112 8 HET MSE B 37 8 HET MSE B 39 8 HET MSE B 112 8 HET SO4 A 208 5 HET SO4 A 209 5 HET SO4 A 210 5 HET SO4 B 208 5 HET EDO B 209 4 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 EDO C2 H6 O2 FORMUL 8 HOH *323(H2 O) HELIX 1 1 ASP A 14 GLY A 33 1 20 HELIX 2 2 ALA A 34 MSE A 37 5 4 HELIX 3 3 THR A 38 GLY A 47 1 10 HELIX 4 4 ALA A 49 ALA A 57 1 9 HELIX 5 5 GLY A 59 ALA A 73 1 15 HELIX 6 6 ASP A 85 LEU A 102 1 18 HELIX 7 7 SER A 103 ASP A 116 1 14 HELIX 8 8 ASP A 116 GLY A 131 1 16 HELIX 9 9 GLY A 131 ALA A 149 1 19 HELIX 10 10 PRO A 157 ILE A 170 1 14 HELIX 11 11 ILE A 170 LEU A 179 1 10 HELIX 12 12 ILE A 190 ALA A 202 1 13 HELIX 13 13 PRO B 13 MSE B 37 1 25 HELIX 14 14 THR B 38 GLY B 47 1 10 HELIX 15 15 ALA B 49 TYR B 54 1 6 HELIX 16 16 GLY B 59 ALA B 73 1 15 HELIX 17 17 ASP B 85 LEU B 102 1 18 HELIX 18 18 SER B 103 ASP B 116 1 14 HELIX 19 19 ASP B 116 GLY B 131 1 16 HELIX 20 20 GLY B 131 ALA B 149 1 19 HELIX 21 21 PRO B 157 LEU B 179 1 23 HELIX 22 22 ILE B 190 ALA B 202 1 13 LINK C ALA A 36 N MSE A 37 1555 1555 1.34 LINK C MSE A 37 N THR A 38 1555 1555 1.33 LINK C THR A 38 N MSE A 39 1555 1555 1.33 LINK C MSE A 39 N GLU A 40 1555 1555 1.33 LINK C ARG A 111 N MSE A 112 1555 1555 1.32 LINK C MSE A 112 N LEU A 113 1555 1555 1.32 LINK C ALA B 36 N MSE B 37 1555 1555 1.33 LINK C MSE B 37 N THR B 38 1555 1555 1.32 LINK C THR B 38 N MSE B 39 1555 1555 1.32 LINK C MSE B 39 N GLU B 40 1555 1555 1.33 LINK C ARG B 111 N MSE B 112 1555 1555 1.33 LINK C MSE B 112 N LEU B 113 1555 1555 1.33 CISPEP 1 LEU A 185 PRO A 186 0 6.06 CISPEP 2 LEU B 185 PRO B 186 0 4.84 SITE 1 AC1 4 ARG A 55 ARG A 182 ARG A 193 ARG B 160 SITE 1 AC2 4 ARG A 160 ARG B 55 ARG B 182 ARG B 193 SITE 1 AC3 6 ARG A 134 ARG A 137 ARG A 141 ARG B 134 SITE 2 AC3 6 ARG B 137 ARG B 141 SITE 1 AC4 1 THR A 38 SITE 1 AC5 3 GLY B 59 ARG B 60 ARG B 122 CRYST1 53.340 53.340 234.240 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018748 0.010824 0.000000 0.00000 SCALE2 0.000000 0.021648 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004269 0.00000