PDB Short entry for 3DB4
HEADER    LIGASE                                  30-MAY-08   3DB4              
TITLE     CRYSTAL STRUCTURE OF THE TANDEM TUDOR DOMAINS OF THE E3 UBIQUITIN-    
TITLE    2 PROTEIN LIGASE UHRF1                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE UHRF1;                         
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: TANDEM TUDOR DOMAINS (UNP RESIDUES 126-285);               
COMPND   5 SYNONYM: UBIQUITIN-LIKE PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN
COMPND   6 1, UBIQUITIN-LIKE-CONTAINING PHD AND RING FINGER DOMAINS PROTEIN 1,  
COMPND   7 INVERTED CCAAT BOX-BINDING PROTEIN OF 90 KDA, TRANSCRIPTION FACTOR   
COMPND   8 ICBP90, NUCLEAR ZINC FINGER PROTEIN NP95, NUCLEAR PROTEIN 95, HUNP95,
COMPND   9 RING FINGER PROTEIN 106;                                             
COMPND  10 EC: 6.3.2.-;                                                         
COMPND  11 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: UHRF1, ICBP90, NP95, RNF106;                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3);                                
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL                                 
KEYWDS    CELL CYCLE, DNA DAMAGE, DNA REPAIR, TANDEM TUDOR DOMAINS, LIGASE,     
KEYWDS   2 METAL BINDING, DNA REPLICATION, TRANSCRIPTIONAL SILENCING,           
KEYWDS   3 CHROMATIN, PHOSPHORYLATION, TRANSCRIPTION, TRANSCRIPTION REGULATION, 
KEYWDS   4 UBL CONJUGATION PATHWAY, ZINC-FINGER, STRUCTURAL GENOMICS,           
KEYWDS   5 STRUCTURAL GENOMICS CONSORTIUM, SGC, DNA-BINDING, METAL-BINDING,     
KEYWDS   6 NUCLEUS, PHOSPHOPROTEIN                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.R.WALKER,G.V.AVVAKUMOV,S.XUE,A.DONG,Y.LI,C.BOUNTRA,J.WEIGELT,       
AUTHOR   2 C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV,S.DHE-PAGANON,STRUCTURAL      
AUTHOR   3 GENOMICS CONSORTIUM (SGC)                                            
REVDAT   4   18-APR-12 3DB4    1       JRNL   VERSN                             
REVDAT   3   13-APR-11 3DB4    1       JRNL                                     
REVDAT   2   24-FEB-09 3DB4    1       VERSN                                    
REVDAT   1   16-SEP-08 3DB4    0                                                
JRNL        AUTH   N.NADY,A.LEMAK,J.R.WALKER,G.V.AVVAKUMOV,M.S.KARETA,M.ACHOUR, 
JRNL        AUTH 2 S.XUE,S.DUAN,A.ALLALI-HASSANI,X.ZUO,Y.X.WANG,C.BRONNER,      
JRNL        AUTH 3 F.CHEDIN,C.H.ARROWSMITH,S.DHE-PAGANON                        
JRNL        TITL   RECOGNITION OF MULTIVALENT HISTONE STATES ASSOCIATED WITH    
JRNL        TITL 2 HETEROCHROMATIN BY UHRF1 PROTEIN.                            
JRNL        REF    J.BIOL.CHEM.                  V. 286 24300 2011              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   21489993                                                     
JRNL        DOI    10.1074/JBC.M111.234104                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.40 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 38.66                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 9112                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.220                           
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.285                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.800                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 458                             
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.40                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.46                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 633                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 96.82                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3140                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 36                           
REMARK   3   BIN FREE R VALUE                    : 0.4270                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1111                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 5                                       
REMARK   3   SOLVENT ATOMS            : 34                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 55.02                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -2.37000                                             
REMARK   3    B22 (A**2) : -2.37000                                             
REMARK   3    B33 (A**2) : 3.56000                                              
REMARK   3    B12 (A**2) : -1.19000                                             
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.268         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.247         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.259         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.059        
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.950                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.909                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  1134 ; 0.007 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  1537 ; 1.055 ; 1.939       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   131 ; 6.078 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):    65 ;38.181 ;24.154       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   189 ;15.823 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    12 ;18.259 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   168 ; 0.067 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):   875 ; 0.003 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):   407 ; 0.196 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):   733 ; 0.304 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):    65 ; 0.132 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    25 ; 0.214 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):     3 ; 0.070 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):   688 ; 0.723 ; 3.000       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  1087 ; 1.186 ; 4.000       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   512 ; 1.692 ; 5.000       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   450 ; 2.231 ; 7.000       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 8                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   129        A   148                          
REMARK   3    ORIGIN FOR THE GROUP (A):  30.0329  -4.4302  12.9678              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1809 T22:   0.0796                                     
REMARK   3      T33:   0.4240 T12:  -0.1537                                     
REMARK   3      T13:   0.1738 T23:  -0.2231                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   9.9198 L22:  21.7284                                     
REMARK   3      L33:  22.5077 L12:  -2.0448                                     
REMARK   3      L13:  -0.2850 L23:   9.0365                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0271 S12:  -0.3601 S13:   0.6523                       
REMARK   3      S21:   1.5363 S22:  -0.6760 S23:   1.8289                       
REMARK   3      S31:  -0.3700 S32:  -0.6127 S33:   0.6489                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   149        A   183                          
REMARK   3    ORIGIN FOR THE GROUP (A):  29.0582  -3.3424  12.0231              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1911 T22:   0.1103                                     
REMARK   3      T33:   0.3348 T12:  -0.0911                                     
REMARK   3      T13:   0.2421 T23:  -0.1558                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   8.7520 L22:  18.3889                                     
REMARK   3      L33:   7.5090 L12:   0.4795                                     
REMARK   3      L13:  -2.9553 L23:   1.9528                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.5914 S12:  -0.6660 S13:   0.7044                       
REMARK   3      S21:   1.4368 S22:  -0.5575 S23:   2.4833                       
REMARK   3      S31:  -0.1353 S32:  -0.6448 S33:  -0.0339                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   184        A   214                          
REMARK   3    ORIGIN FOR THE GROUP (A):  33.7040  -7.8448   8.6417              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.0787 T22:   0.1678                                     
REMARK   3      T33:   0.2481 T12:  -0.0290                                     
REMARK   3      T13:   0.0263 T23:  -0.1185                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.5849 L22:  16.7017                                     
REMARK   3      L33:   2.6111 L12:   2.1741                                     
REMARK   3      L13:  -0.8565 L23:   4.2539                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.3877 S12:  -0.2526 S13:   0.3353                       
REMARK   3      S21:   0.5116 S22:  -0.4099 S23:   1.0701                       
REMARK   3      S31:  -0.0107 S32:  -0.1172 S33:   0.0222                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   215        A   237                          
REMARK   3    ORIGIN FOR THE GROUP (A):  35.0102 -20.7329  -2.5175              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.0244 T22:   0.0942                                     
REMARK   3      T33:  -0.0036 T12:   0.0638                                     
REMARK   3      T13:  -0.0819 T23:  -0.1127                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:  10.0904 L22:  17.0071                                     
REMARK   3      L33:   6.5009 L12:   5.8270                                     
REMARK   3      L13:  -0.6809 L23:   2.1699                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.3780 S12:   0.6861 S13:  -0.4233                       
REMARK   3      S21:  -0.8944 S22:  -0.1287 S23:   0.0581                       
REMARK   3      S31:  -0.3932 S32:  -0.0313 S33:   0.5068                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 5                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   238        A   248                          
REMARK   3    ORIGIN FOR THE GROUP (A):  31.1818 -25.0660  -2.7152              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.0278 T22:   0.1248                                     
REMARK   3      T33:   0.1981 T12:   0.0334                                     
REMARK   3      T13:  -0.1398 T23:  -0.1951                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   4.5071 L22:   4.4648                                     
REMARK   3      L33:   4.8926 L12:   4.2198                                     
REMARK   3      L13:  -1.3901 L23:   0.2132                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.3517 S12:   0.3259 S13:  -0.7799                       
REMARK   3      S21:  -0.7555 S22:  -0.4503 S23:   1.5670                       
REMARK   3      S31:  -0.3360 S32:  -0.3040 S33:   0.8021                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 6                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   249        A   261                          
REMARK   3    ORIGIN FOR THE GROUP (A):  34.2952 -28.5171  -6.2104              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1271 T22:   0.1732                                     
REMARK   3      T33:   0.2035 T12:   0.0109                                     
REMARK   3      T13:  -0.1263 T23:  -0.2226                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   8.0307 L22:  19.4094                                     
REMARK   3      L33:   3.0002 L12: -12.0455                                     
REMARK   3      L13:  -4.5723 L23:   6.1283                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.3977 S12:   0.2734 S13:   0.7717                       
REMARK   3      S21:  -1.7340 S22:  -0.4129 S23:  -0.8086                       
REMARK   3      S31:  -0.6504 S32:   0.0524 S33:   0.0152                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 7                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   263        A   278                          
REMARK   3    ORIGIN FOR THE GROUP (A):  33.2854 -21.1984  -3.8379              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1663 T22:   0.0741                                     
REMARK   3      T33:   0.0918 T12:  -0.0444                                     
REMARK   3      T13:  -0.0853 T23:  -0.1378                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   7.3778 L22:  11.2782                                     
REMARK   3      L33:  13.8184 L12:   0.1693                                     
REMARK   3      L13:  -2.0667 L23:   1.1336                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0297 S12:   1.1032 S13:  -0.1941                       
REMARK   3      S21:  -0.7441 S22:  -0.1554 S23:   1.1895                       
REMARK   3      S31:  -0.3496 S32:  -0.4742 S33:   0.1258                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 8                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   279        A   283                          
REMARK   3    ORIGIN FOR THE GROUP (A):  28.2257 -19.0540  12.3475              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.4401 T22:   0.3836                                     
REMARK   3      T33:   0.6014 T12:  -0.0568                                     
REMARK   3      T13:   0.2986 T23:  -0.2120                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   9.2816 L22:   7.3923                                     
REMARK   3      L33:  62.3614 L12:  -2.2258                                     
REMARK   3      L13: -23.9260 L23:   7.9059                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.3596 S12:  -2.2040 S13:   0.6941                       
REMARK   3      S21:   1.8782 S22:  -0.0735 S23:   2.1380                       
REMARK   3      S31:   0.9719 S32:  -0.9634 S33:   0.4331                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B           
REMARK   3  FACTORS, ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS.  
REMARK   4                                                                      
REMARK   4 3DB4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-08.                  
REMARK 100 THE RCSB ID CODE IS RCSB047817.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 05-MAR-08                          
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : 6.50                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 23-ID-B                            
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.00000                            
REMARK 200  MONOCHROMATOR                  : DOUBLE CRYSTAL                     
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 300 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 9579                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.400                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 38.660                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : 11.900                             
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.10500                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 25.5500                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.49                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 10.90                              
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.45100                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.760                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD                          
REMARK 200 SOFTWARE USED: SOLVE                                                 
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: DATA SET USED FOR PHASING WAS COLLECTED AT 0.97942           
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 61.60                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % PEG 8000, 0.1 M SODIUM              
REMARK 280  CACODYLATE, 0.2 M AMMONIUM SULFATE, 0.001 M TCEP, PH 6.50, VAPOR    
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 298K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   -X,-Y,Z                                                 
REMARK 290       5555   Y,-X+Y,Z+2/3                                            
REMARK 290       6555   X-Y,X,Z+1/3                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       28.89667            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       14.44833            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       28.89667            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       14.44833            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   125                                                      
REMARK 465     MSE A   126                                                      
REMARK 465     TRP A   127                                                      
REMARK 465     ASP A   128                                                      
REMARK 465     GLY A   133                                                      
REMARK 465     LYS A   162                                                      
REMARK 465     ALA A   163                                                      
REMARK 465     PRO A   164                                                      
REMARK 465     SER A   165                                                      
REMARK 465     ARG A   166                                                      
REMARK 465     ASP A   167                                                      
REMARK 465     GLU A   168                                                      
REMARK 465     PRO A   169                                                      
REMARK 465     CYS A   170                                                      
REMARK 465     SER A   171                                                      
REMARK 465     SER A   172                                                      
REMARK 465     THR A   173                                                      
REMARK 465     SER A   174                                                      
REMARK 465     ARG A   175                                                      
REMARK 465     PRO A   176                                                      
REMARK 465     ALA A   177                                                      
REMARK 465     LEU A   178                                                      
REMARK 465     GLU A   179                                                      
REMARK 465     GLY A   262                                                      
REMARK 465     GLY A   284                                                      
REMARK 465     GLU A   285                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A 131    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 136    CG   CD   CE   NZ                                   
REMARK 470     ARG A 161    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG A 202    CZ   NH1  NH2                                       
REMARK 470     ARG A 209    NH1  NH2                                            
REMARK 470     LYS A 213    CE   NZ                                             
REMARK 470     LYS A 233    CE   NZ                                             
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASN A 138      -10.74     85.49                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3BI7   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE SRA DOMAIN OF E3 UBIQUITIN-PROTEIN          
REMARK 900 LIGASE UHRF1                                                         
REMARK 900 RELATED ID: 3CLZ   RELATED DB: PDB                                   
REMARK 900 THE SET AND RING ASSOCIATED (SRA) DOMAIN OF UHRF1 BOUND TO           
REMARK 900 METHYLATED DNA                                                       
REMARK 900 RELATED ID: 2FAZ   RELATED DB: PDB                                   
REMARK 900 UBIQUITIN-LIKE DOMAIN OF HUMAN NUCLEAR ZINC FINGER PROTEIN           
REMARK 900 NP95                                                                 
REMARK 900 RELATED ID: 3DB3   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE TANDEM TUDOR DOMAINS OF THE E3              
REMARK 900 UBIQUITIN-PROTEIN LIGASE UHRF1 IN COMPLEX WITH A                     
REMARK 900 TRIMETHYLATED HISTONE H3-K9 PEPTIDE                                  
DBREF  3DB4 A  126   285  UNP    Q96T88   UHRF1_HUMAN    126    285             
SEQADV 3DB4 GLY A  125  UNP  Q96T88              EXPRESSION TAG                 
SEQRES   1 A  161  GLY MSE TRP ASP GLU THR GLU LEU GLY LEU TYR LYS VAL          
SEQRES   2 A  161  ASN GLU TYR VAL ASP ALA ARG ASP THR ASN MSE GLY ALA          
SEQRES   3 A  161  TRP PHE GLU ALA GLN VAL VAL ARG VAL THR ARG LYS ALA          
SEQRES   4 A  161  PRO SER ARG ASP GLU PRO CYS SER SER THR SER ARG PRO          
SEQRES   5 A  161  ALA LEU GLU GLU ASP VAL ILE TYR HIS VAL LYS TYR ASP          
SEQRES   6 A  161  ASP TYR PRO GLU ASN GLY VAL VAL GLN MSE ASN SER ARG          
SEQRES   7 A  161  ASP VAL ARG ALA ARG ALA ARG THR ILE ILE LYS TRP GLN          
SEQRES   8 A  161  ASP LEU GLU VAL GLY GLN VAL VAL MSE LEU ASN TYR ASN          
SEQRES   9 A  161  PRO ASP ASN PRO LYS GLU ARG GLY PHE TRP TYR ASP ALA          
SEQRES  10 A  161  GLU ILE SER ARG LYS ARG GLU THR ARG THR ALA ARG GLU          
SEQRES  11 A  161  LEU TYR ALA ASN VAL VAL LEU GLY ASP ASP SER LEU ASN          
SEQRES  12 A  161  ASP CYS ARG ILE ILE PHE VAL ASP GLU VAL PHE LYS ILE          
SEQRES  13 A  161  GLU ARG PRO GLY GLU                                          
MODRES 3DB4 MSE A  148  MET  SELENOMETHIONINE                                   
MODRES 3DB4 MSE A  199  MET  SELENOMETHIONINE                                   
MODRES 3DB4 MSE A  224  MET  SELENOMETHIONINE                                   
HET    MSE  A 148       8                                                       
HET    MSE  A 199       8                                                       
HET    MSE  A 224       8                                                       
HET    SO4  A 301       5                                                       
HETNAM     MSE SELENOMETHIONINE                                                 
HETNAM     SO4 SULFATE ION                                                      
FORMUL   1  MSE    3(C5 H11 N O2 SE)                                            
FORMUL   2  SO4    O4 S 2-                                                      
FORMUL   3  HOH   *34(H2 O)                                                     
HELIX    1   1 TYR A  191  ASN A  194  5                                   4    
HELIX    2   2 LYS A  213  LEU A  217  5                                   5    
SHEET    1   A 5 VAL A 196  ASN A 200  0                                        
SHEET    2   A 5 ILE A 183  TYR A 188 -1  N  TYR A 184   O  MSE A 199           
SHEET    3   A 5 TRP A 151  THR A 160 -1  N  ARG A 158   O  HIS A 185           
SHEET    4   A 5 TYR A 140  ARG A 144 -1  N  VAL A 141   O  ALA A 154           
SHEET    5   A 5 VAL A 204  ALA A 206 -1  O  ARG A 205   N  ASP A 142           
SHEET    1   B 5 SER A 265  ILE A 271  0                                        
SHEET    2   B 5 ARG A 253  VAL A 260 -1  N  VAL A 259   O  LEU A 266           
SHEET    3   B 5 PHE A 237  GLU A 248 -1  N  ARG A 247   O  GLU A 254           
SHEET    4   B 5 VAL A 222  TYR A 227 -1  N  VAL A 223   O  ALA A 241           
SHEET    5   B 5 PHE A 278  LYS A 279 -1  O  PHE A 278   N  MSE A 224           
LINK         C   ASN A 147                 N   MSE A 148     1555   1555  1.33  
LINK         C   MSE A 148                 N   GLY A 149     1555   1555  1.33  
LINK         C   GLN A 198                 N   MSE A 199     1555   1555  1.33  
LINK         C   MSE A 199                 N   ASN A 200     1555   1555  1.33  
LINK         C   VAL A 223                 N   MSE A 224     1555   1555  1.33  
LINK         C   MSE A 224                 N   LEU A 225     1555   1555  1.33  
SITE     1 AC1  6 ASN A 226  ARG A 235  TRP A 238  THR A 249                    
SITE     2 AC1  6 HOH A 322  HOH A 328                                          
CRYST1   98.654   98.654   43.345  90.00  90.00 120.00 P 62          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010136  0.005852  0.000000        0.00000                         
SCALE2      0.000000  0.011705  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.023071        0.00000