PDB Short entry for 3ECI HEADER APOPTOSIS 30-AUG-08 3ECI TITLE MICROTUBULE-ASSOCIATED PROTEIN 1 LIGHT CHAIN 3 ALPHA ISOFORM A TITLE 2 (MAP1ALC3) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROTUBULE-ASSOCIATED PROTEIN 1 LIGHT CHAIN 3 ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3A, COMPND 5 MAP1A/MAP1B LC3 A, MAP1A/1B LIGHT CHAIN 3 A, MAP1 LIGHT CHAIN 3- LIKE COMPND 6 PROTEIN 1, AUTOPHAGY-RELATED PROTEIN LC3 A, AUTOPHAGY-RELATED COMPND 7 UBIQUITIN-LIKE MODIFIER LC3 A; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: ISOFORM A (MAPALC3) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP1LC3A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS UBIQUITIN-LIKE (UB ROLL), AUTOPHAGY, CYTOPLASM, CYTOPLASMIC VESICLE, KEYWDS 2 LIPOPROTEIN, MEMBRANE, MICROTUBULE, UBL CONJUGATION PATHWAY, KEYWDS 3 STRUCTURAL GENOMICS CONSORTIUM, ALTERNATIVE SPLICING, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,T.L.DAVIS,S.MUJIB,C.BUTLER-COLE,W.TEMPEL,J.WEIGELT, AUTHOR 2 C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,A.BOTCHKAREV,S.DHE-PAGANON REVDAT 3 30-AUG-23 3ECI 1 SEQADV REVDAT 2 24-FEB-09 3ECI 1 VERSN REVDAT 1 14-OCT-08 3ECI 0 JRNL AUTH J.R.WALKER,T.L.DAVIS,S.MUJIB,C.BUTLER-COLE,W.TEMPEL, JRNL AUTH 2 C.BOUNTRA,J.WEIGELT,C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV, JRNL AUTH 3 S.DHE-PAGANON JRNL TITL HUMAN AUTOPHAGY-RELATED PROTEIN LC3 A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 6602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.700 REMARK 3 FREE R VALUE TEST SET COUNT : 397 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 497 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1649 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.11000 REMARK 3 B22 (A**2) : -1.11000 REMARK 3 B33 (A**2) : 2.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 10.469 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.411 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.370 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 41.440 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1685 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1088 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2299 ; 1.348 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2665 ; 0.929 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 222 ; 6.746 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 61 ;34.736 ;23.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 247 ;17.557 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;15.968 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1894 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 339 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1128 ; 1.181 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 436 ; 0.219 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1796 ; 1.968 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 557 ; 1.206 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 503 ; 1.869 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 116 REMARK 3 ORIGIN FOR THE GROUP (A): -60.3976 37.9076 10.6300 REMARK 3 T TENSOR REMARK 3 T11: 0.0495 T22: 0.1243 REMARK 3 T33: 0.0197 T12: 0.0211 REMARK 3 T13: -0.0068 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 10.2297 L22: 5.5985 REMARK 3 L33: 4.0550 L12: -0.0114 REMARK 3 L13: 0.3451 L23: -0.4003 REMARK 3 S TENSOR REMARK 3 S11: 0.1552 S12: -0.1056 S13: -0.3875 REMARK 3 S21: 0.1206 S22: -0.1798 S23: 0.0959 REMARK 3 S31: 0.0982 S32: 0.2384 S33: 0.0245 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 116 REMARK 3 ORIGIN FOR THE GROUP (A): -59.0152 9.9064 6.0783 REMARK 3 T TENSOR REMARK 3 T11: 0.4923 T22: 0.1591 REMARK 3 T33: 0.6069 T12: -0.0666 REMARK 3 T13: 0.1236 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 8.5873 L22: 7.8396 REMARK 3 L33: 4.9284 L12: 0.4621 REMARK 3 L13: 2.5984 L23: 0.9326 REMARK 3 S TENSOR REMARK 3 S11: 0.4059 S12: 0.1604 S13: -0.2889 REMARK 3 S21: 0.2096 S22: -0.2254 S23: 1.9023 REMARK 3 S31: 0.5986 S32: -0.4296 S33: -0.1805 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. REMARK 4 REMARK 4 3ECI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049150. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7058 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.71300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1UGM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32 % PEG 4000, 0.1 M NA ACETATE, PH REMARK 280 4.50, 0.2 M AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 CRYOPROTECTION 20% GLYCEROL, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.54450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 18.54450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 GLU A 117 REMARK 465 THR A 118 REMARK 465 PHE A 119 REMARK 465 GLY A 120 REMARK 465 PHE A 121 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ASP B 4 REMARK 465 GLU B 117 REMARK 465 THR B 118 REMARK 465 PHE B 119 REMARK 465 GLY B 120 REMARK 465 PHE B 121 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 5 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 9 CG CD OE1 NE2 REMARK 470 LYS A 18 CD CE NZ REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 GLN A 21 CG CD OE1 NE2 REMARK 470 GLN A 22 CG CD OE1 NE2 REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 25 CG OD1 OD2 REMARK 470 GLN A 26 CD OE1 NE2 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 GLN A 43 CG CD OE1 NE2 REMARK 470 ASP A 48 CG OD1 OD2 REMARK 470 LYS A 51 CE NZ REMARK 470 SER A 61 OG REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 80 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 85 CG CD OE1 NE2 REMARK 470 VAL A 89 CG1 CG2 REMARK 470 SER A 90 OG REMARK 470 GLN A 101 CG CD OE1 NE2 REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 ARG B 5 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 9 CG CD OE1 NE2 REMARK 470 ARG B 10 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 11 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 18 CD CE NZ REMARK 470 GLU B 19 CG CD OE1 OE2 REMARK 470 GLN B 21 CG CD OE1 NE2 REMARK 470 GLN B 22 CG CD OE1 NE2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 25 CG OD1 OD2 REMARK 470 GLN B 26 CG CD OE1 NE2 REMARK 470 TYR B 38 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 39 CG CD CE NZ REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 GLN B 43 CG CD OE1 NE2 REMARK 470 LEU B 47 CG CD1 CD2 REMARK 470 ASP B 48 CG OD1 OD2 REMARK 470 LYS B 49 CE NZ REMARK 470 SER B 61 OG REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 LEU B 63 CD1 CD2 REMARK 470 LYS B 65 CG CD CE NZ REMARK 470 ARG B 68 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 69 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 72 CG CD OE1 NE2 REMARK 470 LEU B 73 CG CD1 CD2 REMARK 470 THR B 76 OG1 CG2 REMARK 470 GLN B 77 CG CD OE1 NE2 REMARK 470 VAL B 89 CG1 CG2 REMARK 470 SER B 90 OG REMARK 470 ASP B 97 CG OD1 OD2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 13 -39.38 -39.43 REMARK 500 GLN A 43 2.45 -68.89 REMARK 500 ASN A 84 -112.12 63.69 REMARK 500 GLN A 85 47.15 -88.94 REMARK 500 ASP B 48 -73.57 -57.04 REMARK 500 ASN B 84 -106.92 53.64 REMARK 500 GLN B 85 59.42 -95.90 REMARK 500 REMARK 500 REMARK: NULL DBREF 3ECI A 1 121 UNP Q9H492 MLP3A_HUMAN 1 121 DBREF 3ECI B 1 121 UNP Q9H492 MLP3A_HUMAN 1 121 SEQADV 3ECI GLY A 0 UNP Q9H492 EXPRESSION TAG SEQADV 3ECI GLY B 0 UNP Q9H492 EXPRESSION TAG SEQRES 1 A 122 GLY MET PRO SER ASP ARG PRO PHE LYS GLN ARG ARG SER SEQRES 2 A 122 PHE ALA ASP ARG CYS LYS GLU VAL GLN GLN ILE ARG ASP SEQRES 3 A 122 GLN HIS PRO SER LYS ILE PRO VAL ILE ILE GLU ARG TYR SEQRES 4 A 122 LYS GLY GLU LYS GLN LEU PRO VAL LEU ASP LYS THR LYS SEQRES 5 A 122 PHE LEU VAL PRO ASP HIS VAL ASN MET SER GLU LEU VAL SEQRES 6 A 122 LYS ILE ILE ARG ARG ARG LEU GLN LEU ASN PRO THR GLN SEQRES 7 A 122 ALA PHE PHE LEU LEU VAL ASN GLN HIS SER MET VAL SER SEQRES 8 A 122 VAL SER THR PRO ILE ALA ASP ILE TYR GLU GLN GLU LYS SEQRES 9 A 122 ASP GLU ASP GLY PHE LEU TYR MET VAL TYR ALA SER GLN SEQRES 10 A 122 GLU THR PHE GLY PHE SEQRES 1 B 122 GLY MET PRO SER ASP ARG PRO PHE LYS GLN ARG ARG SER SEQRES 2 B 122 PHE ALA ASP ARG CYS LYS GLU VAL GLN GLN ILE ARG ASP SEQRES 3 B 122 GLN HIS PRO SER LYS ILE PRO VAL ILE ILE GLU ARG TYR SEQRES 4 B 122 LYS GLY GLU LYS GLN LEU PRO VAL LEU ASP LYS THR LYS SEQRES 5 B 122 PHE LEU VAL PRO ASP HIS VAL ASN MET SER GLU LEU VAL SEQRES 6 B 122 LYS ILE ILE ARG ARG ARG LEU GLN LEU ASN PRO THR GLN SEQRES 7 B 122 ALA PHE PHE LEU LEU VAL ASN GLN HIS SER MET VAL SER SEQRES 8 B 122 VAL SER THR PRO ILE ALA ASP ILE TYR GLU GLN GLU LYS SEQRES 9 B 122 ASP GLU ASP GLY PHE LEU TYR MET VAL TYR ALA SER GLN SEQRES 10 B 122 GLU THR PHE GLY PHE HELIX 1 1 PRO A 6 ARG A 11 1 6 HELIX 2 2 SER A 12 HIS A 27 1 16 HELIX 3 3 ASN A 59 GLN A 72 1 14 HELIX 4 4 PRO A 94 LYS A 103 1 10 HELIX 5 5 PRO B 6 ARG B 11 1 6 HELIX 6 6 SER B 12 HIS B 27 1 16 HELIX 7 7 ASN B 59 ARG B 70 1 12 HELIX 8 8 PRO B 94 LYS B 103 1 10 SHEET 1 A 4 LYS A 51 PRO A 55 0 SHEET 2 A 4 LYS A 30 ARG A 37 -1 N VAL A 33 O PHE A 52 SHEET 3 A 4 LEU A 109 SER A 115 1 O LEU A 109 N ILE A 34 SHEET 4 A 4 PHE A 79 VAL A 83 -1 N PHE A 80 O ALA A 114 SHEET 1 B 4 LYS B 51 PRO B 55 0 SHEET 2 B 4 LYS B 30 ARG B 37 -1 N VAL B 33 O PHE B 52 SHEET 3 B 4 LEU B 109 ALA B 114 1 O MET B 111 N ILE B 34 SHEET 4 B 4 PHE B 80 VAL B 83 -1 N LEU B 82 O VAL B 112 CRYST1 80.066 80.066 37.089 90.00 90.00 90.00 P 42 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012490 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012490 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026962 0.00000