PDB Short entry for 3EE6 HEADER HYDROLASE 04-SEP-08 3EE6 TITLE CRYSTAL STRUCTURE ANALYSIS OF TRIPEPTIDYL PEPTIDASE -I COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIPEPTIDYL-PEPTIDASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TPP-1, TRIPEPTIDYL-PEPTIDASE I, TPP-I, TRIPEPTIDYL COMPND 5 AMINOPEPTIDASE, LYSOSOMAL PEPSTATIN-INSENSITIVE PROTEASE, LPIC, CELL COMPND 6 GROWTH-INHIBITING GENE 1 PROTEIN; COMPND 7 EC: 3.4.14.9; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CLN2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK 293; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLAMID KEYWDS TRIPEPETIDYL PEPTIDASE -I, DISEASE MUTATION, EPILEPSY, GLYCOPROTEIN, KEYWDS 2 HYDROLASE, LYSOSOME, NEURONAL CEROID LIPOFUSCINOSIS, PROTEASE, KEYWDS 3 SERINE PROTEASE, ZYMOGEN EXPDTA X-RAY DIFFRACTION AUTHOR A.PAL,R.KRAETZNER,M.GRAPP,T.GRUENE,K.SCHREIBER,M.GRANBORG,H.URLAUB, AUTHOR 2 A.R.ASIF,S.BECKER,J.GARTNER,G.M.SHELDRICK,R.STEINFELD REVDAT 6 29-JUL-20 3EE6 1 COMPND REMARK SEQADV HETNAM REVDAT 6 2 1 LINK SITE REVDAT 5 20-JUN-18 3EE6 1 SOURCE REVDAT 4 13-JUL-11 3EE6 1 VERSN REVDAT 3 26-MAY-09 3EE6 1 JRNL REVDAT 2 24-FEB-09 3EE6 1 VERSN REVDAT 1 25-NOV-08 3EE6 0 JRNL AUTH A.PAL,R.KRAETZNER,T.GRUENE,M.GRAPP,K.SCHREIBER,M.GRONBORG, JRNL AUTH 2 H.URLAUB,S.BECKER,A.R.ASIF,J.GARTNER,G.M.SHELDRICK, JRNL AUTH 3 R.STEINFELD JRNL TITL STRUCTURE OF TRIPEPTIDYL-PEPTIDASE I PROVIDES INSIGHT INTO JRNL TITL 2 THE MOLECULAR BASIS OF LATE INFANTILE NEURONAL CEROID JRNL TITL 3 LIPOFUSCINOSIS JRNL REF J.BIOL.CHEM. V. 284 3976 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19038966 JRNL DOI 10.1074/JBC.M806947200 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 61321 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3150 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4118 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 232 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8162 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 126 REMARK 3 SOLVENT ATOMS : 73 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 42.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.20000 REMARK 3 B22 (A**2) : 5.46000 REMARK 3 B33 (A**2) : -5.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.303 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.237 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.217 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.702 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8580 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 5768 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11702 ; 1.436 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13922 ; 1.415 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1056 ;10.490 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 388 ;35.202 ;23.299 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1224 ;19.457 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;17.632 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1262 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9630 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1790 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5292 ; 0.454 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2134 ; 0.076 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8530 ; 0.847 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3288 ; 1.187 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3172 ; 1.844 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 392 A 402 1 REMARK 3 1 B 392 B 402 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 157 ; 0.040 ; 0.050 REMARK 3 TIGHT THERMAL 1 B (A**2): 157 ; 0.060 ; 0.500 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 215 B 225 1 REMARK 3 1 A 215 A 225 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 B (A): 115 ; 0.020 ; 0.050 REMARK 3 TIGHT THERMAL 2 A (A**2): 115 ; 0.040 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 562 REMARK 3 ORIGIN FOR THE GROUP (A): 94.0152 25.5013 64.1675 REMARK 3 T TENSOR REMARK 3 T11: -0.3046 T22: -0.3039 REMARK 3 T33: -0.3033 T12: 0.0849 REMARK 3 T13: 0.0050 T23: 0.0698 REMARK 3 L TENSOR REMARK 3 L11: 2.5873 L22: 2.2794 REMARK 3 L33: 4.2468 L12: -0.7541 REMARK 3 L13: -0.2639 L23: 1.1114 REMARK 3 S TENSOR REMARK 3 S11: 0.1749 S12: -0.3348 S13: -0.1318 REMARK 3 S21: 0.0411 S22: -0.0669 S23: 0.0635 REMARK 3 S31: -0.0126 S32: -0.3867 S33: -0.1080 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 20 B 562 REMARK 3 ORIGIN FOR THE GROUP (A): 137.5995 21.0338 86.9148 REMARK 3 T TENSOR REMARK 3 T11: -0.2598 T22: -0.1372 REMARK 3 T33: -0.3324 T12: -0.1246 REMARK 3 T13: -0.0054 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 2.9047 L22: 2.2240 REMARK 3 L33: 4.6535 L12: 1.0245 REMARK 3 L13: -1.0042 L23: -1.1180 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: -0.0197 S13: -0.1576 REMARK 3 S21: -0.0390 S22: 0.0135 S23: -0.0982 REMARK 3 S31: 0.4018 S32: 0.4702 S33: 0.0152 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61321 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 39.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.180 REMARK 200 R MERGE (I) : 0.03430 REMARK 200 R SYM (I) : 0.05910 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.11 REMARK 200 R MERGE FOR SHELL (I) : 0.31210 REMARK 200 R SYM FOR SHELL (I) : 0.41550 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG 4000, 0.02M ZINC SULFATE, 0.1M REMARK 280 SODIUM ACETATE, 0.1M AMMONIUM SULFATE, PH 4.9, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 56.72500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.72500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -228.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 77040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -765.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 226.90000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 CYS A 6 REMARK 465 LEU A 7 REMARK 465 LEU A 8 REMARK 465 GLY A 9 REMARK 465 LEU A 10 REMARK 465 PHE A 11 REMARK 465 ALA A 12 REMARK 465 LEU A 13 REMARK 465 ILE A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 465 LYS A 18 REMARK 465 CYS A 19 REMARK 465 SER A 181 REMARK 465 LEU A 182 REMARK 465 ARG A 183 REMARK 465 GLN A 184 REMARK 465 ARG A 185 REMARK 465 PRO A 186 REMARK 465 GLU A 187 REMARK 465 PRO A 188 REMARK 465 GLN A 189 REMARK 465 VAL A 190 REMARK 465 THR A 191 REMARK 465 GLY A 192 REMARK 465 THR A 193 REMARK 465 VAL A 194 REMARK 465 GLY A 195 REMARK 465 LEU A 196 REMARK 465 SER A 565 REMARK 465 HIS A 566 REMARK 465 HIS A 567 REMARK 465 HIS A 568 REMARK 465 HIS A 569 REMARK 465 HIS A 570 REMARK 465 HIS A 571 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 LEU B 3 REMARK 465 GLN B 4 REMARK 465 ALA B 5 REMARK 465 CYS B 6 REMARK 465 LEU B 7 REMARK 465 LEU B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 PHE B 11 REMARK 465 ALA B 12 REMARK 465 LEU B 13 REMARK 465 ILE B 14 REMARK 465 LEU B 15 REMARK 465 SER B 16 REMARK 465 GLY B 17 REMARK 465 LYS B 18 REMARK 465 CYS B 19 REMARK 465 SER B 181 REMARK 465 LEU B 182 REMARK 465 ARG B 183 REMARK 465 GLN B 184 REMARK 465 ARG B 185 REMARK 465 PRO B 186 REMARK 465 GLU B 187 REMARK 465 PRO B 188 REMARK 465 GLN B 189 REMARK 465 VAL B 190 REMARK 465 THR B 191 REMARK 465 GLY B 192 REMARK 465 THR B 193 REMARK 465 VAL B 194 REMARK 465 GLY B 195 REMARK 465 LEU B 196 REMARK 465 SER B 565 REMARK 465 HIS B 566 REMARK 465 HIS B 567 REMARK 465 HIS B 568 REMARK 465 HIS B 569 REMARK 465 HIS B 570 REMARK 465 HIS B 571 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 146 OG1 CG2 REMARK 470 GLU B 232 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 20 NE2 GLN A 158 1.78 REMARK 500 O GLY A 34 O GLY A 143 1.90 REMARK 500 NH1 ARG A 497 O LEU A 561 1.92 REMARK 500 OD2 ASP A 517 O PRO A 540 2.04 REMARK 500 O PRO B 563 CL CL B 580 2.09 REMARK 500 OD2 ASP B 517 O PRO B 540 2.14 REMARK 500 O PHE B 230 NH1 ARG B 297 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 379 C - N - CD ANGL. DEV. = -20.1 DEGREES REMARK 500 PRO A 563 C - N - CA ANGL. DEV. = 12.5 DEGREES REMARK 500 PRO B 379 C - N - CD ANGL. DEV. = -16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 38 -158.11 -84.81 REMARK 500 LYS A 110 127.71 -33.38 REMARK 500 SER A 294 66.37 34.38 REMARK 500 VAL A 368 -108.81 -78.91 REMARK 500 SER A 369 -84.91 -70.13 REMARK 500 TYR A 406 -36.71 -32.91 REMARK 500 SER A 495 11.17 86.10 REMARK 500 SER A 525 -158.61 -160.13 REMARK 500 PRO A 544 34.80 -90.81 REMARK 500 PRO A 563 -75.93 -61.29 REMARK 500 GLN B 56 -83.19 -106.22 REMARK 500 ASN B 57 47.07 -86.39 REMARK 500 LYS B 101 -55.22 64.79 REMARK 500 ALA B 106 -10.78 78.39 REMARK 500 ALA B 108 127.42 -31.87 REMARK 500 LYS B 110 112.52 -27.75 REMARK 500 SER B 113 -156.56 -108.01 REMARK 500 GLN B 117 18.91 52.65 REMARK 500 GLU B 232 32.95 -85.96 REMARK 500 GLN B 264 -84.52 -130.26 REMARK 500 ALA B 285 -73.33 -55.43 REMARK 500 ASN B 286 45.18 -96.88 REMARK 500 SER B 293 79.27 -115.80 REMARK 500 HIS B 298 -9.30 -55.94 REMARK 500 SER B 369 -89.88 -1.08 REMARK 500 HIS B 435 47.10 -99.06 REMARK 500 TRP B 470 53.78 -118.22 REMARK 500 SER B 495 -169.65 -71.15 REMARK 500 SER B 525 -153.90 -154.01 REMARK 500 VAL B 531 78.64 -118.23 REMARK 500 ASN B 562 154.68 -45.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 378 PRO A 379 67.40 REMARK 500 TYR A 449 PRO A 450 66.57 REMARK 500 PHE B 378 PRO B 379 72.24 REMARK 500 TYR B 449 PRO B 450 55.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR B 449 10.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 577 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 137 OE2 REMARK 620 2 HIS A 155 NE2 97.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 576 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 457 OD2 REMARK 620 2 GLU B 529 OE1 133.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 581 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 517 OD1 REMARK 620 2 VAL A 518 O 95.3 REMARK 620 3 GLY A 539 O 95.3 88.6 REMARK 620 4 GLY A 541 O 77.8 162.9 76.7 REMARK 620 5 ASP A 543 OD1 173.9 90.1 82.0 96.2 REMARK 620 6 HOH A 609 O 85.1 88.5 177.1 106.3 97.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 577 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 529 OE1 REMARK 620 2 HIS B 197 ND1 131.6 REMARK 620 3 ASP B 457 OD2 133.1 86.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 576 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 137 OE1 REMARK 620 2 GLU B 137 OE2 60.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 579 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 424 OE2 REMARK 620 2 HIS B 511 NE2 144.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 581 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 517 OD1 REMARK 620 2 VAL B 518 O 91.2 REMARK 620 3 GLY B 539 O 106.7 87.8 REMARK 620 4 GLY B 541 O 80.2 163.9 81.8 REMARK 620 5 ASP B 543 OD1 168.5 87.2 84.6 104.0 REMARK 620 6 HOH B 634 O 78.2 82.6 169.4 108.5 90.3 REMARK 620 N 1 2 3 4 5 DBREF 3EE6 A 1 563 UNP O14773 TPP1_HUMAN 1 563 DBREF 3EE6 B 1 563 UNP O14773 TPP1_HUMAN 1 563 SEQADV 3EE6 ARG A 564 UNP O14773 EXPRESSION TAG SEQADV 3EE6 SER A 565 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS A 566 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS A 567 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS A 568 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS A 569 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS A 570 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS A 571 UNP O14773 EXPRESSION TAG SEQADV 3EE6 ARG B 564 UNP O14773 EXPRESSION TAG SEQADV 3EE6 SER B 565 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS B 566 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS B 567 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS B 568 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS B 569 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS B 570 UNP O14773 EXPRESSION TAG SEQADV 3EE6 HIS B 571 UNP O14773 EXPRESSION TAG SEQRES 1 A 571 MET GLY LEU GLN ALA CYS LEU LEU GLY LEU PHE ALA LEU SEQRES 2 A 571 ILE LEU SER GLY LYS CYS SER TYR SER PRO GLU PRO ASP SEQRES 3 A 571 GLN ARG ARG THR LEU PRO PRO GLY TRP VAL SER LEU GLY SEQRES 4 A 571 ARG ALA ASP PRO GLU GLU GLU LEU SER LEU THR PHE ALA SEQRES 5 A 571 LEU ARG GLN GLN ASN VAL GLU ARG LEU SER GLU LEU VAL SEQRES 6 A 571 GLN ALA VAL SER ASP PRO SER SER PRO GLN TYR GLY LYS SEQRES 7 A 571 TYR LEU THR LEU GLU ASN VAL ALA ASP LEU VAL ARG PRO SEQRES 8 A 571 SER PRO LEU THR LEU HIS THR VAL GLN LYS TRP LEU LEU SEQRES 9 A 571 ALA ALA GLY ALA GLN LYS CYS HIS SER VAL ILE THR GLN SEQRES 10 A 571 ASP PHE LEU THR CYS TRP LEU SER ILE ARG GLN ALA GLU SEQRES 11 A 571 LEU LEU LEU PRO GLY ALA GLU PHE HIS HIS TYR VAL GLY SEQRES 12 A 571 GLY PRO THR GLU THR HIS VAL VAL ARG SER PRO HIS PRO SEQRES 13 A 571 TYR GLN LEU PRO GLN ALA LEU ALA PRO HIS VAL ASP PHE SEQRES 14 A 571 VAL GLY GLY LEU HIS ARG PHE PRO PRO THR SER SER LEU SEQRES 15 A 571 ARG GLN ARG PRO GLU PRO GLN VAL THR GLY THR VAL GLY SEQRES 16 A 571 LEU HIS LEU GLY VAL THR PRO SER VAL ILE ARG LYS ARG SEQRES 17 A 571 TYR ASN LEU THR SER GLN ASP VAL GLY SER GLY THR SER SEQRES 18 A 571 ASN ASN SER GLN ALA CYS ALA GLN PHE LEU GLU GLN TYR SEQRES 19 A 571 PHE HIS ASP SER ASP LEU ALA GLN PHE MET ARG LEU PHE SEQRES 20 A 571 GLY GLY ASN PHE ALA HIS GLN ALA SER VAL ALA ARG VAL SEQRES 21 A 571 VAL GLY GLN GLN GLY ARG GLY ARG ALA GLY ILE GLU ALA SEQRES 22 A 571 SER LEU ASP VAL GLN TYR LEU MET SER ALA GLY ALA ASN SEQRES 23 A 571 ILE SER THR TRP VAL TYR SER SER PRO GLY ARG HIS GLU SEQRES 24 A 571 GLY GLN GLU PRO PHE LEU GLN TRP LEU MET LEU LEU SER SEQRES 25 A 571 ASN GLU SER ALA LEU PRO HIS VAL HIS THR VAL SER TYR SEQRES 26 A 571 GLY ASP ASP GLU ASP SER LEU SER SER ALA TYR ILE GLN SEQRES 27 A 571 ARG VAL ASN THR GLU LEU MET LYS ALA ALA ALA ARG GLY SEQRES 28 A 571 LEU THR LEU LEU PHE ALA SER GLY ASP SER GLY ALA GLY SEQRES 29 A 571 CYS TRP SER VAL SER GLY ARG HIS GLN PHE ARG PRO THR SEQRES 30 A 571 PHE PRO ALA SER SER PRO TYR VAL THR THR VAL GLY GLY SEQRES 31 A 571 THR SER PHE GLN GLU PRO PHE LEU ILE THR ASN GLU ILE SEQRES 32 A 571 VAL ASP TYR ILE SER GLY GLY GLY PHE SER ASN VAL PHE SEQRES 33 A 571 PRO ARG PRO SER TYR GLN GLU GLU ALA VAL THR LYS PHE SEQRES 34 A 571 LEU SER SER SER PRO HIS LEU PRO PRO SER SER TYR PHE SEQRES 35 A 571 ASN ALA SER GLY ARG ALA TYR PRO ASP VAL ALA ALA LEU SEQRES 36 A 571 SER ASP GLY TYR TRP VAL VAL SER ASN ARG VAL PRO ILE SEQRES 37 A 571 PRO TRP VAL SER GLY THR SER ALA SER THR PRO VAL PHE SEQRES 38 A 571 GLY GLY ILE LEU SER LEU ILE ASN GLU HIS ARG ILE LEU SEQRES 39 A 571 SER GLY ARG PRO PRO LEU GLY PHE LEU ASN PRO ARG LEU SEQRES 40 A 571 TYR GLN GLN HIS GLY ALA GLY LEU PHE ASP VAL THR ARG SEQRES 41 A 571 GLY CYS HIS GLU SER CYS LEU ASP GLU GLU VAL GLU GLY SEQRES 42 A 571 GLN GLY PHE CYS SER GLY PRO GLY TRP ASP PRO VAL THR SEQRES 43 A 571 GLY TRP GLY THR PRO ASN PHE PRO ALA LEU LEU LYS THR SEQRES 44 A 571 LEU LEU ASN PRO ARG SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 571 MET GLY LEU GLN ALA CYS LEU LEU GLY LEU PHE ALA LEU SEQRES 2 B 571 ILE LEU SER GLY LYS CYS SER TYR SER PRO GLU PRO ASP SEQRES 3 B 571 GLN ARG ARG THR LEU PRO PRO GLY TRP VAL SER LEU GLY SEQRES 4 B 571 ARG ALA ASP PRO GLU GLU GLU LEU SER LEU THR PHE ALA SEQRES 5 B 571 LEU ARG GLN GLN ASN VAL GLU ARG LEU SER GLU LEU VAL SEQRES 6 B 571 GLN ALA VAL SER ASP PRO SER SER PRO GLN TYR GLY LYS SEQRES 7 B 571 TYR LEU THR LEU GLU ASN VAL ALA ASP LEU VAL ARG PRO SEQRES 8 B 571 SER PRO LEU THR LEU HIS THR VAL GLN LYS TRP LEU LEU SEQRES 9 B 571 ALA ALA GLY ALA GLN LYS CYS HIS SER VAL ILE THR GLN SEQRES 10 B 571 ASP PHE LEU THR CYS TRP LEU SER ILE ARG GLN ALA GLU SEQRES 11 B 571 LEU LEU LEU PRO GLY ALA GLU PHE HIS HIS TYR VAL GLY SEQRES 12 B 571 GLY PRO THR GLU THR HIS VAL VAL ARG SER PRO HIS PRO SEQRES 13 B 571 TYR GLN LEU PRO GLN ALA LEU ALA PRO HIS VAL ASP PHE SEQRES 14 B 571 VAL GLY GLY LEU HIS ARG PHE PRO PRO THR SER SER LEU SEQRES 15 B 571 ARG GLN ARG PRO GLU PRO GLN VAL THR GLY THR VAL GLY SEQRES 16 B 571 LEU HIS LEU GLY VAL THR PRO SER VAL ILE ARG LYS ARG SEQRES 17 B 571 TYR ASN LEU THR SER GLN ASP VAL GLY SER GLY THR SER SEQRES 18 B 571 ASN ASN SER GLN ALA CYS ALA GLN PHE LEU GLU GLN TYR SEQRES 19 B 571 PHE HIS ASP SER ASP LEU ALA GLN PHE MET ARG LEU PHE SEQRES 20 B 571 GLY GLY ASN PHE ALA HIS GLN ALA SER VAL ALA ARG VAL SEQRES 21 B 571 VAL GLY GLN GLN GLY ARG GLY ARG ALA GLY ILE GLU ALA SEQRES 22 B 571 SER LEU ASP VAL GLN TYR LEU MET SER ALA GLY ALA ASN SEQRES 23 B 571 ILE SER THR TRP VAL TYR SER SER PRO GLY ARG HIS GLU SEQRES 24 B 571 GLY GLN GLU PRO PHE LEU GLN TRP LEU MET LEU LEU SER SEQRES 25 B 571 ASN GLU SER ALA LEU PRO HIS VAL HIS THR VAL SER TYR SEQRES 26 B 571 GLY ASP ASP GLU ASP SER LEU SER SER ALA TYR ILE GLN SEQRES 27 B 571 ARG VAL ASN THR GLU LEU MET LYS ALA ALA ALA ARG GLY SEQRES 28 B 571 LEU THR LEU LEU PHE ALA SER GLY ASP SER GLY ALA GLY SEQRES 29 B 571 CYS TRP SER VAL SER GLY ARG HIS GLN PHE ARG PRO THR SEQRES 30 B 571 PHE PRO ALA SER SER PRO TYR VAL THR THR VAL GLY GLY SEQRES 31 B 571 THR SER PHE GLN GLU PRO PHE LEU ILE THR ASN GLU ILE SEQRES 32 B 571 VAL ASP TYR ILE SER GLY GLY GLY PHE SER ASN VAL PHE SEQRES 33 B 571 PRO ARG PRO SER TYR GLN GLU GLU ALA VAL THR LYS PHE SEQRES 34 B 571 LEU SER SER SER PRO HIS LEU PRO PRO SER SER TYR PHE SEQRES 35 B 571 ASN ALA SER GLY ARG ALA TYR PRO ASP VAL ALA ALA LEU SEQRES 36 B 571 SER ASP GLY TYR TRP VAL VAL SER ASN ARG VAL PRO ILE SEQRES 37 B 571 PRO TRP VAL SER GLY THR SER ALA SER THR PRO VAL PHE SEQRES 38 B 571 GLY GLY ILE LEU SER LEU ILE ASN GLU HIS ARG ILE LEU SEQRES 39 B 571 SER GLY ARG PRO PRO LEU GLY PHE LEU ASN PRO ARG LEU SEQRES 40 B 571 TYR GLN GLN HIS GLY ALA GLY LEU PHE ASP VAL THR ARG SEQRES 41 B 571 GLY CYS HIS GLU SER CYS LEU ASP GLU GLU VAL GLU GLY SEQRES 42 B 571 GLN GLY PHE CYS SER GLY PRO GLY TRP ASP PRO VAL THR SEQRES 43 B 571 GLY TRP GLY THR PRO ASN PHE PRO ALA LEU LEU LYS THR SEQRES 44 B 571 LEU LEU ASN PRO ARG SER HIS HIS HIS HIS HIS HIS MODRES 3EE6 ASN A 210 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN A 286 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN A 313 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN A 443 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN B 210 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN B 286 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN B 313 ASN GLYCOSYLATION SITE MODRES 3EE6 ASN B 443 ASN GLYCOSYLATION SITE HET NAG A 572 13 HET NAG A 573 13 HET NAG A 574 13 HET NAG A 575 13 HET ZN A 576 1 HET ZN A 577 1 HET ZN A 578 1 HET ZN A 579 1 HET CL A 580 1 HET CA A 581 1 HET SO4 A 582 5 HET NAG B 572 13 HET NAG B 573 13 HET NAG B 574 13 HET NAG B 575 13 HET ZN B 576 1 HET ZN B 577 1 HET ZN B 578 1 HET ZN B 579 1 HET CL B 580 1 HET CA B 581 1 HET SO4 B 582 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 3 NAG 8(C8 H15 N O6) FORMUL 7 ZN 8(ZN 2+) FORMUL 11 CL 2(CL 1-) FORMUL 12 CA 2(CA 2+) FORMUL 13 SO4 2(O4 S 2-) FORMUL 25 HOH *73(H2 O) HELIX 1 1 ASN A 57 ASP A 70 1 14 HELIX 2 2 THR A 81 ARG A 90 1 10 HELIX 3 3 SER A 92 GLY A 107 1 16 HELIX 4 4 ILE A 126 LEU A 133 1 8 HELIX 5 5 PRO A 160 ALA A 164 5 5 HELIX 6 6 THR A 201 TYR A 209 1 9 HELIX 7 7 HIS A 236 GLY A 248 1 13 HELIX 8 8 GLY A 270 GLY A 284 1 15 HELIX 9 9 GLU A 302 SER A 312 1 11 HELIX 10 10 ASP A 330 LEU A 332 5 3 HELIX 11 11 SER A 333 ARG A 350 1 18 HELIX 12 12 PRO A 419 TYR A 421 5 3 HELIX 13 13 GLN A 422 SER A 433 1 12 HELIX 14 14 PRO A 438 PHE A 442 5 5 HELIX 15 15 GLY A 473 LEU A 494 1 22 HELIX 16 16 LEU A 503 GLN A 510 1 8 HELIX 17 17 ASN A 552 ASN A 562 1 11 HELIX 18 18 ASN B 57 ASP B 70 1 14 HELIX 19 19 THR B 81 ARG B 90 1 10 HELIX 20 20 SER B 92 LEU B 103 1 12 HELIX 21 21 LEU B 104 ALA B 108 5 5 HELIX 22 22 ILE B 126 LEU B 133 1 8 HELIX 23 23 PRO B 160 ALA B 164 5 5 HELIX 24 24 THR B 201 TYR B 209 1 9 HELIX 25 25 HIS B 236 GLY B 248 1 13 HELIX 26 26 GLY B 270 GLY B 284 1 15 HELIX 27 27 GLU B 302 SER B 312 1 11 HELIX 28 28 ASP B 330 LEU B 332 5 3 HELIX 29 29 SER B 333 ARG B 350 1 18 HELIX 30 30 PRO B 419 TYR B 421 5 3 HELIX 31 31 GLN B 422 SER B 433 1 12 HELIX 32 32 GLY B 473 SER B 495 1 23 HELIX 33 33 LEU B 503 GLN B 510 1 8 HELIX 34 34 ASN B 552 ASN B 562 1 11 SHEET 1 A 3 VAL A 36 ARG A 40 0 SHEET 2 A 3 HIS A 139 VAL A 142 -1 O HIS A 140 N LEU A 38 SHEET 3 A 3 HIS A 149 ARG A 152 -1 O ARG A 152 N HIS A 139 SHEET 1 B 4 GLN A 109 SER A 113 0 SHEET 2 B 4 PHE A 119 SER A 125 -1 O TRP A 123 N GLN A 109 SHEET 3 B 4 GLU A 46 LEU A 53 -1 N PHE A 51 O LEU A 120 SHEET 4 B 4 VAL A 167 GLY A 171 -1 O GLY A 171 N THR A 50 SHEET 1 C 7 ARG A 259 VAL A 261 0 SHEET 2 C 7 SER A 288 SER A 293 1 O VAL A 291 N ARG A 259 SHEET 3 C 7 SER A 224 GLN A 229 1 N CYS A 227 O TYR A 292 SHEET 4 C 7 VAL A 320 VAL A 323 1 O THR A 322 N ALA A 226 SHEET 5 C 7 THR A 353 ALA A 357 1 O THR A 353 N HIS A 321 SHEET 6 C 7 THR A 386 PHE A 393 1 O VAL A 388 N PHE A 356 SHEET 7 C 7 GLU A 402 VAL A 404 -1 O ILE A 403 N SER A 392 SHEET 1 D 7 ARG A 259 VAL A 261 0 SHEET 2 D 7 SER A 288 SER A 293 1 O VAL A 291 N ARG A 259 SHEET 3 D 7 SER A 224 GLN A 229 1 N CYS A 227 O TYR A 292 SHEET 4 D 7 VAL A 320 VAL A 323 1 O THR A 322 N ALA A 226 SHEET 5 D 7 THR A 353 ALA A 357 1 O THR A 353 N HIS A 321 SHEET 6 D 7 THR A 386 PHE A 393 1 O VAL A 388 N PHE A 356 SHEET 7 D 7 VAL A 452 LEU A 455 1 O VAL A 452 N GLY A 389 SHEET 1 E 2 ASP A 327 ASP A 328 0 SHEET 2 E 2 THR A 377 PHE A 378 -1 O PHE A 378 N ASP A 327 SHEET 1 F 2 TRP A 366 SER A 367 0 SHEET 2 F 2 HIS A 372 GLN A 373 -1 O GLN A 373 N TRP A 366 SHEET 1 G 2 GLY A 411 PRO A 417 0 SHEET 2 G 2 GLY A 446 TYR A 449 -1 O TYR A 449 N GLY A 411 SHEET 1 H 2 TYR A 459 SER A 463 0 SHEET 2 H 2 VAL A 466 VAL A 471 -1 O ILE A 468 N VAL A 461 SHEET 1 I 2 LEU A 515 PHE A 516 0 SHEET 2 I 2 THR A 550 PRO A 551 -1 O THR A 550 N PHE A 516 SHEET 1 J 2 CYS A 522 GLU A 524 0 SHEET 2 J 2 GLN A 534 CYS A 537 -1 O GLY A 535 N HIS A 523 SHEET 1 K 3 TRP B 35 ARG B 40 0 SHEET 2 K 3 HIS B 139 GLY B 143 -1 O VAL B 142 N VAL B 36 SHEET 3 K 3 THR B 148 ARG B 152 -1 O ARG B 152 N HIS B 139 SHEET 1 L 4 GLN B 109 HIS B 112 0 SHEET 2 L 4 PHE B 119 SER B 125 -1 O TRP B 123 N GLN B 109 SHEET 3 L 4 GLU B 46 LEU B 53 -1 N PHE B 51 O LEU B 120 SHEET 4 L 4 VAL B 167 GLY B 171 -1 O GLY B 171 N THR B 50 SHEET 1 M 7 ARG B 259 VAL B 261 0 SHEET 2 M 7 SER B 288 SER B 293 1 O VAL B 291 N ARG B 259 SHEET 3 M 7 SER B 224 GLN B 229 1 N GLN B 225 O TRP B 290 SHEET 4 M 7 VAL B 320 VAL B 323 1 O THR B 322 N ALA B 226 SHEET 5 M 7 THR B 353 ALA B 357 1 O THR B 353 N HIS B 321 SHEET 6 M 7 THR B 386 PHE B 393 1 O VAL B 388 N PHE B 356 SHEET 7 M 7 GLU B 402 VAL B 404 -1 O ILE B 403 N SER B 392 SHEET 1 N 7 ARG B 259 VAL B 261 0 SHEET 2 N 7 SER B 288 SER B 293 1 O VAL B 291 N ARG B 259 SHEET 3 N 7 SER B 224 GLN B 229 1 N GLN B 225 O TRP B 290 SHEET 4 N 7 VAL B 320 VAL B 323 1 O THR B 322 N ALA B 226 SHEET 5 N 7 THR B 353 ALA B 357 1 O THR B 353 N HIS B 321 SHEET 6 N 7 THR B 386 PHE B 393 1 O VAL B 388 N PHE B 356 SHEET 7 N 7 VAL B 452 LEU B 455 1 O VAL B 452 N GLY B 389 SHEET 1 O 2 ASP B 327 ASP B 328 0 SHEET 2 O 2 THR B 377 PHE B 378 -1 O PHE B 378 N ASP B 327 SHEET 1 P 2 TRP B 366 VAL B 368 0 SHEET 2 P 2 ARG B 371 GLN B 373 -1 O GLN B 373 N TRP B 366 SHEET 1 Q 2 GLY B 411 PRO B 417 0 SHEET 2 Q 2 GLY B 446 TYR B 449 -1 O TYR B 449 N GLY B 411 SHEET 1 R 2 TYR B 459 SER B 463 0 SHEET 2 R 2 VAL B 466 VAL B 471 -1 O ILE B 468 N VAL B 461 SHEET 1 S 2 LEU B 515 PHE B 516 0 SHEET 2 S 2 THR B 550 PRO B 551 -1 O THR B 550 N PHE B 516 SHEET 1 T 2 CYS B 522 LEU B 527 0 SHEET 2 T 2 GLU B 532 CYS B 537 -1 O GLY B 533 N CYS B 526 SSBOND 1 CYS A 111 CYS A 122 1555 1555 2.05 SSBOND 2 CYS A 365 CYS A 526 1555 1555 2.06 SSBOND 3 CYS A 522 CYS A 537 1555 1555 2.05 SSBOND 4 CYS B 111 CYS B 122 1555 1555 2.05 SSBOND 5 CYS B 365 CYS B 526 1555 1555 2.06 SSBOND 6 CYS B 522 CYS B 537 1555 1555 2.04 LINK ND2 ASN A 210 C4 NAG A 572 1555 1555 1.30 LINK ND2 ASN A 286 C4 NAG A 573 1555 1555 1.35 LINK ND2 ASN A 313 C4 NAG A 574 1555 1555 1.30 LINK ND2 ASN A 443 C4 NAG A 575 1555 1555 1.29 LINK ND2 ASN B 210 C4 NAG B 572 1555 1555 1.31 LINK ND2 ASN B 286 C4 NAG B 573 1555 1555 1.31 LINK ND2 ASN B 313 C4 NAG B 574 1555 1555 1.32 LINK ND2 ASN B 443 C4 NAG B 575 1555 1555 1.31 LINK OE1 GLU A 45 ZN ZN A 578 1555 1555 2.29 LINK OE2 GLU A 137 ZN ZN A 577 1555 1555 1.82 LINK NE2 HIS A 155 ZN ZN A 577 1555 1555 2.38 LINK OD2 ASP A 457 ZN ZN A 576 1555 1555 2.10 LINK NE2 HIS A 511 ZN ZN A 579 1555 1555 1.89 LINK OD1 ASP A 517 CA CA A 581 1555 1555 2.54 LINK O VAL A 518 CA CA A 581 1555 1555 2.22 LINK OE1 GLU A 529 ZN ZN B 577 1555 1555 2.23 LINK O GLY A 539 CA CA A 581 1555 1555 2.47 LINK O GLY A 541 CA CA A 581 1555 1555 2.34 LINK OD1 ASP A 543 CA CA A 581 1555 1555 2.54 LINK ZN ZN A 576 OE1 GLU B 529 1555 1555 2.35 LINK CA CA A 581 O HOH A 609 1555 1555 2.33 LINK OE1 GLU B 137 ZN ZN B 576 1555 1555 2.07 LINK OE2 GLU B 137 ZN ZN B 576 1555 1555 2.31 LINK ND1 HIS B 197 ZN ZN B 577 1555 1555 2.33 LINK OE2 GLU B 424 ZN ZN B 579 1555 1555 2.22 LINK OD2 ASP B 457 ZN ZN B 577 1555 1555 2.23 LINK NE2 HIS B 511 ZN ZN B 579 1555 1555 1.95 LINK OD1 ASP B 517 CA CA B 581 1555 1555 2.43 LINK O VAL B 518 CA CA B 581 1555 1555 2.36 LINK O GLY B 539 CA CA B 581 1555 1555 2.30 LINK O GLY B 541 CA CA B 581 1555 1555 2.36 LINK OD1 ASP B 543 CA CA B 581 1555 1555 2.57 LINK CA CA B 581 O HOH B 634 1555 1555 2.32 CRYST1 113.450 128.930 100.500 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008814 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009950 0.00000