PDB Short entry for 3EJH HEADER CELL ADHESION 18-SEP-08 3EJH TITLE CRYSTAL STRUCTURE OF THE FIBRONECTIN 8-9FNI DOMAIN PAIR IN COMPLEX TITLE 2 WITH A TYPE-I COLLAGEN PEPTIDE CAVEAT 3EJH HYP E 964 HAS WRONG CHIRALITY AT ATOM CG HYP E 973 HAS WRONG CAVEAT 2 3EJH CHIRALITY AT ATOM CG HYP F 976 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 3EJH CG COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: 8-9FNI; COMPND 5 SYNONYM: FN,COLD-INSOLUBLE GLOBULIN,CIG; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: COLLAGEN TYPE-I A1 CHAIN; COMPND 10 CHAIN: E, F; COMPND 11 FRAGMENT: COLLAGENASE SITE C-TERMINAL PEPTIDE; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FN1, FN; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: X-33; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: GENOMIC INTEGRATION; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE SOURCE 13 OF THE PEPTIDE IS NATURALLY FOUND IN HOMO SAPIENS (HUMAN) TYPE-I SOURCE 14 COLLAGEN A1 CHAIN. KEYWDS FIBRONECTIN, COLLAGEN, PROTEIN COMPLEX, COLLAGENASE SITE, ACUTE KEYWDS 2 PHASE, CELL ADHESION, DISEASE MUTATION, EXTRACELLULAR MATRIX, KEYWDS 3 GLYCOPROTEIN, HEPARIN-BINDING, PHOSPHOPROTEIN, PYRROLIDONE KEYWDS 4 CARBOXYLIC ACID, SECRETED, SULFATION EXPDTA X-RAY DIFFRACTION AUTHOR M.C.ERAT,E.D.LOWE,I.D.CAMPBELL,I.VAKONAKIS REVDAT 8 30-AUG-23 3EJH 1 REMARK REVDAT 7 20-OCT-21 3EJH 1 COMPND SOURCE DBREF SEQADV REVDAT 7 2 1 HETSYN REVDAT 6 29-JUL-20 3EJH 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE REVDAT 5 14-MAR-12 3EJH 1 MTRIX1 MTRIX2 MTRIX3 REMARK REVDAT 4 16-NOV-11 3EJH 1 HETATM REVDAT 3 13-JUL-11 3EJH 1 VERSN REVDAT 2 28-APR-09 3EJH 1 JRNL REVDAT 1 03-FEB-09 3EJH 0 JRNL AUTH M.C.ERAT,D.A.SLATTER,E.D.LOWE,C.J.MILLARD,R.W.FARNDALE, JRNL AUTH 2 I.D.CAMPBELL,I.VAKONAKIS JRNL TITL IDENTIFICATION AND STRUCTURAL ANALYSIS OF TYPE I COLLAGEN JRNL TITL 2 SITES IN COMPLEX WITH FIBRONECTIN FRAGMENTS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 4195 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19251642 JRNL DOI 10.1073/PNAS.0812516106 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2380 - 5.2900 0.98 1817 138 0.1970 0.2240 REMARK 3 2 5.2900 - 4.1990 1.00 1840 143 0.1660 0.2020 REMARK 3 3 4.1990 - 3.6690 1.00 1818 152 0.1660 0.1700 REMARK 3 4 3.6690 - 3.3330 1.00 1839 148 0.1840 0.1820 REMARK 3 5 3.3330 - 3.0950 1.00 1837 145 0.2010 0.2730 REMARK 3 6 3.0950 - 2.9120 1.00 1830 138 0.2340 0.3090 REMARK 3 7 2.9120 - 2.7660 1.00 1871 146 0.2140 0.2830 REMARK 3 8 2.7660 - 2.6460 1.00 1831 138 0.2230 0.2420 REMARK 3 9 2.6460 - 2.5440 1.00 1845 147 0.2440 0.3010 REMARK 3 10 2.5440 - 2.4560 1.00 1808 136 0.2360 0.3180 REMARK 3 11 2.4560 - 2.3790 1.00 1857 144 0.2470 0.3240 REMARK 3 12 2.3790 - 2.3110 1.00 1825 144 0.2470 0.3020 REMARK 3 13 2.3110 - 2.2500 1.00 1841 148 0.2320 0.2950 REMARK 3 14 2.2500 - 2.1960 1.00 1808 147 0.2340 0.3030 REMARK 3 15 2.1960 - 2.1460 1.00 1864 147 0.2260 0.2790 REMARK 3 16 2.1460 - 2.1000 1.00 1803 136 0.2350 0.2760 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 59.31 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.43100 REMARK 3 B22 (A**2) : 4.43100 REMARK 3 B33 (A**2) : -8.86100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1916 REMARK 3 ANGLE : 1.297 2579 REMARK 3 CHIRALITY : 0.081 247 REMARK 3 PLANARITY : 0.004 339 REMARK 3 DIHEDRAL : 17.760 682 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -28.2235 18.3287 -2.6364 REMARK 3 T TENSOR REMARK 3 T11: 0.2446 T22: 0.3252 REMARK 3 T33: 0.2801 T12: -0.0348 REMARK 3 T13: -0.0761 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 2.5445 L22: 2.0750 REMARK 3 L33: 0.7547 L12: 1.6166 REMARK 3 L13: -0.9621 L23: -0.2491 REMARK 3 S TENSOR REMARK 3 S11: -0.1307 S12: 0.1639 S13: 0.3137 REMARK 3 S21: -0.4053 S22: 0.2066 S23: 0.1369 REMARK 3 S31: -0.1953 S32: -0.3866 S33: -0.0437 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -26.4682 30.8614 23.0860 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.2629 REMARK 3 T33: 0.2604 T12: -0.0720 REMARK 3 T13: 0.0443 T23: -0.0670 REMARK 3 L TENSOR REMARK 3 L11: 1.0588 L22: 2.2181 REMARK 3 L33: 0.6133 L12: 1.3970 REMARK 3 L13: 0.0836 L23: -0.0397 REMARK 3 S TENSOR REMARK 3 S11: 0.3234 S12: 0.1193 S13: 0.3005 REMARK 3 S21: 0.5483 S22: -0.3371 S23: 0.1529 REMARK 3 S31: 0.2519 S32: -0.1134 S33: 0.0025 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -10.9905 24.6195 -8.9458 REMARK 3 T TENSOR REMARK 3 T11: 0.3440 T22: 0.1088 REMARK 3 T33: 0.2934 T12: 0.0630 REMARK 3 T13: 0.0031 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 2.4602 L22: -1.9579 REMARK 3 L33: 2.2544 L12: 1.9997 REMARK 3 L13: 0.1434 L23: 0.4425 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.1807 S13: -0.0656 REMARK 3 S21: -0.0794 S22: -0.0197 S23: -0.2658 REMARK 3 S31: 0.4285 S32: 0.0835 S33: -0.0149 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -26.0306 47.4004 -9.2038 REMARK 3 T TENSOR REMARK 3 T11: 0.4013 T22: 0.2936 REMARK 3 T33: 0.6233 T12: 0.2205 REMARK 3 T13: -0.2164 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 3.0902 L22: 5.9771 REMARK 3 L33: 0.3359 L12: -5.0061 REMARK 3 L13: 1.7787 L23: -1.0255 REMARK 3 S TENSOR REMARK 3 S11: -0.6949 S12: -0.6203 S13: 0.6559 REMARK 3 S21: 0.0853 S22: 0.1408 S23: -0.1602 REMARK 3 S31: -0.6814 S32: -0.5103 S33: 0.5790 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -31.2925 10.3237 2.0042 REMARK 3 T TENSOR REMARK 3 T11: 0.3761 T22: 0.4296 REMARK 3 T33: 0.3401 T12: -0.1177 REMARK 3 T13: -0.0333 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.2051 L22: 0.5963 REMARK 3 L33: 1.9948 L12: 0.8030 REMARK 3 L13: 1.3855 L23: 1.5480 REMARK 3 S TENSOR REMARK 3 S11: -0.2487 S12: -0.1166 S13: 0.2539 REMARK 3 S21: 0.1447 S22: -0.4582 S23: 0.1018 REMARK 3 S31: 0.9980 S32: -1.2237 S33: 0.6111 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -21.3315 20.6247 -9.0467 REMARK 3 T TENSOR REMARK 3 T11: 0.3262 T22: 0.2141 REMARK 3 T33: 0.2425 T12: -0.0838 REMARK 3 T13: 0.1093 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 2.0260 L22: 5.0761 REMARK 3 L33: 1.2189 L12: 0.1451 REMARK 3 L13: -0.5141 L23: 1.3462 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: 0.5125 S13: 0.2831 REMARK 3 S21: 0.2633 S22: 0.1525 S23: -0.6404 REMARK 3 S31: 0.1609 S32: -0.1359 S33: -0.1292 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (chain A and not (resseq 546:552 or REMARK 3 resseq 558 or resseq 578:587 or resseq REMARK 3 592:594 or resseq 598:603)) or chain C REMARK 3 SELECTION : (chain B and not (resseq 546:552 or REMARK 3 resseq 558 or resseq 578:587 or resseq REMARK 3 592:594 or resseq 598:603)) or chain D REMARK 3 ATOM PAIRS NUMBER : 477 REMARK 3 RMSD : 0.108 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: chain E and resseq 961:973 and not REMARK 3 (resname HXP or resname HYP) REMARK 3 SELECTION : chain F and resseq 961:973 and not REMARK 3 (resname HXP or resname HYP) REMARK 3 ATOM PAIRS NUMBER : 71 REMARK 3 RMSD : 0.053 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ONE TLS GROUP PER FNI DOMAIN AND REMARK 3 PEPTIDE CHAIN REMARK 4 REMARK 4 3EJH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19940 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 49.225 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.0230 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57100 REMARK 200 R SYM FOR SHELL (I) : 0.57100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2CG6, 2CG7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M NACL, 0.1 M BISTRIS PH 6.5 , REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.07333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 100.14667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 100.14667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.07333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 650 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 607 REMARK 465 SER A 608 REMARK 465 GLY E 956 REMARK 465 GLN E 957 REMARK 465 ARG E 958 REMARK 465 GLY E 959 REMARK 465 LEU E 975 REMARK 465 HYP E 976 REMARK 465 GLY E 977 REMARK 465 TYR E 978 REMARK 465 GLN B 603 REMARK 465 THR B 604 REMARK 465 TYR B 605 REMARK 465 PRO B 606 REMARK 465 SER B 607 REMARK 465 SER B 608 REMARK 465 GLY F 959 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 638 O HOH E 105 2.10 REMARK 500 NE2 HIS A 581 O HOH A 646 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O TYR F 978 O HOH A 627 4455 2.06 REMARK 500 CE1 HIS B 598 CE1 HIS B 598 4465 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 528 -6.83 83.34 REMARK 500 HIS A 581 -136.78 43.57 REMARK 500 GLU E 969 165.62 176.94 REMARK 500 HYP E 973 -70.39 -73.26 REMARK 500 VAL B 520 -84.60 -111.91 REMARK 500 ASP B 521 -106.42 57.36 REMARK 500 ASP B 521 60.97 -101.80 REMARK 500 GLN B 528 -2.81 81.82 REMARK 500 REMARK 500 REMARK: NULL DBREF 3EJH A 516 608 UNP P02751 FINC_HUMAN 516 608 DBREF 3EJH E 956 978 PDB 3EJH 3EJH 956 978 DBREF 3EJH B 516 608 UNP P02751 FINC_HUMAN 516 608 DBREF 3EJH F 956 978 PDB 3EJH 3EJH 956 978 SEQADV 3EJH GLN A 528 UNP P02751 ASN 528 ENGINEERED MUTATION SEQADV 3EJH LYS A 534 UNP P02751 ARG 534 ENGINEERED MUTATION SEQADV 3EJH GLN B 528 UNP P02751 ASN 528 ENGINEERED MUTATION SEQADV 3EJH LYS B 534 UNP P02751 ARG 534 ENGINEERED MUTATION SEQRES 1 A 93 ASP GLN CYS ILE VAL ASP ASP ILE THR TYR ASN VAL GLN SEQRES 2 A 93 ASP THR PHE HIS LYS LYS HIS GLU GLU GLY HIS MET LEU SEQRES 3 A 93 ASN CYS THR CYS PHE GLY GLN GLY ARG GLY ARG TRP LYS SEQRES 4 A 93 CYS ASP PRO VAL ASP GLN CYS GLN ASP SER GLU THR GLY SEQRES 5 A 93 THR PHE TYR GLN ILE GLY ASP SER TRP GLU LYS TYR VAL SEQRES 6 A 93 HIS GLY VAL ARG TYR GLN CYS TYR CYS TYR GLY ARG GLY SEQRES 7 A 93 ILE GLY GLU TRP HIS CYS GLN PRO LEU GLN THR TYR PRO SEQRES 8 A 93 SER SER SEQRES 1 E 23 GLY GLN ARG GLY VAL VAL GLY LEU HYP GLY GLN ARG GLY SEQRES 2 E 23 GLU ARG GLY PHE HYP GLY LEU HYP GLY TYR SEQRES 1 B 93 ASP GLN CYS ILE VAL ASP ASP ILE THR TYR ASN VAL GLN SEQRES 2 B 93 ASP THR PHE HIS LYS LYS HIS GLU GLU GLY HIS MET LEU SEQRES 3 B 93 ASN CYS THR CYS PHE GLY GLN GLY ARG GLY ARG TRP LYS SEQRES 4 B 93 CYS ASP PRO VAL ASP GLN CYS GLN ASP SER GLU THR GLY SEQRES 5 B 93 THR PHE TYR GLN ILE GLY ASP SER TRP GLU LYS TYR VAL SEQRES 6 B 93 HIS GLY VAL ARG TYR GLN CYS TYR CYS TYR GLY ARG GLY SEQRES 7 B 93 ILE GLY GLU TRP HIS CYS GLN PRO LEU GLN THR TYR PRO SEQRES 8 B 93 SER SER SEQRES 1 F 23 GLY GLN ARG GLY VAL VAL GLY LEU HYP GLY GLN ARG GLY SEQRES 2 F 23 GLU ARG GLY PHE HYP GLY LEU HYP GLY TYR MODRES 3EJH ASN A 542 ASN GLYCOSYLATION SITE MODRES 3EJH ASN B 542 ASN GLYCOSYLATION SITE MODRES 3EJH HYP E 964 PRO 4-HYDROXYPROLINE MODRES 3EJH HYP E 973 PRO 4-HYDROXYPROLINE MODRES 3EJH HYP F 964 PRO 4-HYDROXYPROLINE MODRES 3EJH HYP F 973 PRO 4-HYDROXYPROLINE MODRES 3EJH HYP F 976 PRO 4-HYDROXYPROLINE HET HYP E 964 8 HET HYP E 973 8 HET HYP F 964 8 HET HYP F 973 8 HET HYP F 976 8 HET NAG A 1 14 HET NAG B 1 14 HET GOL B 609 6 HETNAM HYP 4-HYDROXYPROLINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN HYP HYDROXYPROLINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 HYP 5(C5 H9 N O3) FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *105(H2 O) SHEET 1 A 2 GLN A 517 VAL A 520 0 SHEET 2 A 2 ILE A 523 ASN A 526 -1 O TYR A 525 N CYS A 518 SHEET 1 B 8 GLN E 966 GLY E 968 0 SHEET 2 B 8 ARG A 552 PRO A 557 -1 N CYS A 555 O GLN E 966 SHEET 3 B 8 MET A 540 GLY A 547 -1 N ASN A 542 O ASP A 556 SHEET 4 B 8 ASP A 529 LYS A 534 -1 N PHE A 531 O CYS A 543 SHEET 5 B 8 GLY F 965 GLY F 968 -1 O GLY F 965 N THR A 530 SHEET 6 B 8 ARG B 552 PRO B 557 -1 N CYS B 555 O GLN F 966 SHEET 7 B 8 MET B 540 GLY B 547 -1 N ASN B 542 O ASP B 556 SHEET 8 B 8 THR B 530 LYS B 534 -1 N PHE B 531 O CYS B 543 SHEET 1 C 2 GLN A 560 GLN A 562 0 SHEET 2 C 2 PHE A 569 GLN A 571 -1 O TYR A 570 N CYS A 561 SHEET 1 D 3 SER A 575 LYS A 578 0 SHEET 2 D 3 TYR A 585 GLY A 591 -1 O CYS A 587 N TRP A 576 SHEET 3 D 3 GLU A 596 PRO A 601 -1 O GLN A 600 N GLN A 586 SHEET 1 E 2 GLN B 517 VAL B 520 0 SHEET 2 E 2 ILE B 523 ASN B 526 -1 O TYR B 525 N CYS B 518 SHEET 1 F 2 GLN B 560 GLN B 562 0 SHEET 2 F 2 PHE B 569 GLN B 571 -1 O TYR B 570 N CYS B 561 SHEET 1 G 3 SER B 575 VAL B 580 0 SHEET 2 G 3 VAL B 583 GLY B 591 -1 O TYR B 585 N LYS B 578 SHEET 3 G 3 GLU B 596 PRO B 601 -1 O GLN B 600 N GLN B 586 SSBOND 1 CYS A 518 CYS A 545 1555 1555 2.03 SSBOND 2 CYS A 543 CYS A 555 1555 1555 2.08 SSBOND 3 CYS A 561 CYS A 589 1555 1555 2.03 SSBOND 4 CYS A 587 CYS A 599 1555 1555 2.06 SSBOND 5 CYS B 518 CYS B 545 1555 1555 2.03 SSBOND 6 CYS B 543 CYS B 555 1555 1555 2.07 SSBOND 7 CYS B 561 CYS B 589 1555 1555 2.04 SSBOND 8 CYS B 587 CYS B 599 1555 1555 2.04 LINK C1 NAG A 1 ND2 ASN A 542 1555 1555 1.45 LINK C LEU E 963 N HYP E 964 1555 1555 1.32 LINK C HYP E 964 N GLY E 965 1555 1555 1.33 LINK C PHE E 972 N HYP E 973 1555 1555 1.32 LINK C HYP E 973 N GLY E 974 1555 1555 1.33 LINK C1 NAG B 1 ND2 ASN B 542 1555 1555 1.45 LINK C LEU F 963 N HYP F 964 1555 1555 1.33 LINK C HYP F 964 N GLY F 965 1555 1555 1.33 LINK C PHE F 972 N HYP F 973 1555 1555 1.33 LINK C HYP F 973 N GLY F 974 1555 1555 1.34 LINK C LEU F 975 N HYP F 976 1555 1555 1.32 LINK C HYP F 976 N GLY F 977 1555 1555 1.33 CRYST1 56.840 56.840 150.220 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017593 0.010157 0.000000 0.00000 SCALE2 0.000000 0.020315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006657 0.00000 MTRIX1 1 0.261943 0.313324 0.912805 -25.46090 1 MTRIX2 1 0.476324 0.780628 -0.404642 0.76632 1 MTRIX3 1 -0.839346 0.540784 0.055237 -25.16250 1 MTRIX1 2 0.247755 0.367001 0.896620 -27.25420 1 MTRIX2 2 0.482008 0.756112 -0.442677 1.15435 1 MTRIX3 2 -0.840408 0.541854 0.010433 -25.59050 1