PDB Short entry for 3EPZ HEADER TRANSFERASE 30-SEP-08 3EPZ TITLE STRUCTURE OF THE REPLICATION FOCI-TARGETING SEQUENCE OF HUMAN DNA TITLE 2 CYTOSINE METHYLTRANSFERASE DNMT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: REPLICATION FOCI-TARGETING SEQUENCE; COMPND 5 SYNONYM: DNMT1, MCMT, DNA METHYLTRANSFERASE HSAI, DNA MTASE HSAI, COMPND 6 M.HSAI, CXXC-TYPE ZINC FINGER PROTEIN 9; COMPND 7 EC: 2.1.1.37; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AIM, CXX9, CXXC9, DNMT, DNMT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS WINGED HELIX DOMAIN, SH3-LIKE BARREL, CELL CYCLE, METAL BINDING, DNA KEYWDS 2 BINDING, DNA REPLICATION, TRANSCRIPTIONAL SILENCING, CHROMATIN, KEYWDS 3 PHOSPHORYLATION, TRANSCRIPTION, TRANSCRIPTION REGULATION, KEYWDS 4 TRANSFERASE, EPIGENETICS ZINC, ZINC-FINGER, METHYLTRANSFERASE, KEYWDS 5 NUCLEUS, PHOSPHOPROTEIN, REPRESSOR, S-ADENOSYL-L-METHIONINE, KEYWDS 6 STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,G.V.AVVAKUMOV,S.XUE,Y.LI,C.BOUNTRA,J.WEIGELT, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV,S.DHE-PAGANON,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 5 29-JUL-20 3EPZ 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 14-SEP-11 3EPZ 1 JRNL REVDAT 3 13-JUL-11 3EPZ 1 VERSN REVDAT 2 24-FEB-09 3EPZ 1 VERSN REVDAT 1 25-NOV-08 3EPZ 0 JRNL AUTH F.SYEDA,R.L.FAGAN,M.WEAN,G.V.AVVAKUMOV,J.R.WALKER,S.XUE, JRNL AUTH 2 S.DHE-PAGANON,C.BRENNER JRNL TITL THE REPLICATION FOCUS TARGETING SEQUENCE (RFTS) DOMAIN IS A JRNL TITL 2 DNA-COMPETITIVE INHIBITOR OF DNMT1. JRNL REF J.BIOL.CHEM. V. 286 15344 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21389349 JRNL DOI 10.1074/JBC.M110.209882 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 27330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1473 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1908 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3438 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 91 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.64000 REMARK 3 B22 (A**2) : -1.19000 REMARK 3 B33 (A**2) : 1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.51000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.261 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.224 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.965 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3541 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4808 ; 1.154 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 440 ; 5.646 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;38.697 ;25.232 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 553 ;16.684 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;24.841 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 541 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2677 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2242 ; 0.411 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3602 ; 0.792 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1299 ; 1.364 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1206 ; 2.116 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 350 A 359 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9509 14.1056 108.3979 REMARK 3 T TENSOR REMARK 3 T11: 0.1949 T22: 0.2729 REMARK 3 T33: 0.1698 T12: -0.0119 REMARK 3 T13: 0.0132 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 7.0691 L22: 8.7927 REMARK 3 L33: 7.9240 L12: -0.7358 REMARK 3 L13: 0.1835 L23: 2.4146 REMARK 3 S TENSOR REMARK 3 S11: -0.1545 S12: -1.0454 S13: 0.1481 REMARK 3 S21: 1.0240 S22: -0.0361 S23: 0.1820 REMARK 3 S31: 0.6037 S32: -0.8256 S33: 0.1906 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 360 A 369 REMARK 3 ORIGIN FOR THE GROUP (A): 43.3521 16.0731 108.0479 REMARK 3 T TENSOR REMARK 3 T11: 0.2419 T22: 0.2661 REMARK 3 T33: 0.2844 T12: -0.0352 REMARK 3 T13: -0.0389 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 4.1850 L22: 3.2725 REMARK 3 L33: 9.5483 L12: -0.0664 REMARK 3 L13: 0.5027 L23: -1.0963 REMARK 3 S TENSOR REMARK 3 S11: 0.1067 S12: -0.8393 S13: -0.0147 REMARK 3 S21: 0.5277 S22: -0.0543 S23: -0.2150 REMARK 3 S31: -0.1756 S32: 0.5637 S33: -0.0524 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 370 A 378 REMARK 3 ORIGIN FOR THE GROUP (A): 45.9939 21.1345 87.6727 REMARK 3 T TENSOR REMARK 3 T11: 0.1804 T22: 0.2042 REMARK 3 T33: 0.3099 T12: -0.0284 REMARK 3 T13: -0.0031 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 3.4554 L22: 3.7043 REMARK 3 L33: 1.3481 L12: 2.6686 REMARK 3 L13: 2.1509 L23: 1.5640 REMARK 3 S TENSOR REMARK 3 S11: -0.3119 S12: -0.1836 S13: 0.3956 REMARK 3 S21: -0.2485 S22: 0.0373 S23: -0.1477 REMARK 3 S31: -0.2185 S32: -0.1273 S33: 0.2746 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 379 A 390 REMARK 3 ORIGIN FOR THE GROUP (A): 45.5307 18.1689 74.1829 REMARK 3 T TENSOR REMARK 3 T11: 0.3738 T22: 0.4440 REMARK 3 T33: 0.3235 T12: -0.1525 REMARK 3 T13: 0.1225 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 6.1225 L22: 5.9416 REMARK 3 L33: 11.5280 L12: -3.3832 REMARK 3 L13: -3.3377 L23: 1.4551 REMARK 3 S TENSOR REMARK 3 S11: -0.2246 S12: 0.7828 S13: -0.1332 REMARK 3 S21: -1.0847 S22: -0.0502 S23: -0.3826 REMARK 3 S31: 0.1234 S32: 1.1631 S33: 0.2748 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 427 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2330 9.5627 92.9594 REMARK 3 T TENSOR REMARK 3 T11: 0.1591 T22: 0.2076 REMARK 3 T33: 0.2318 T12: -0.0221 REMARK 3 T13: 0.0080 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 1.9816 L22: 1.8561 REMARK 3 L33: 1.8439 L12: -0.6104 REMARK 3 L13: -0.4393 L23: -0.0598 REMARK 3 S TENSOR REMARK 3 S11: -0.0461 S12: 0.1447 S13: 0.0373 REMARK 3 S21: -0.2174 S22: 0.0074 S23: -0.1333 REMARK 3 S31: -0.0008 S32: -0.0248 S33: 0.0387 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 428 A 447 REMARK 3 ORIGIN FOR THE GROUP (A): 40.1013 9.8730 89.8847 REMARK 3 T TENSOR REMARK 3 T11: 0.2211 T22: 0.2183 REMARK 3 T33: 0.1967 T12: -0.0013 REMARK 3 T13: 0.0032 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 4.5936 L22: 4.4925 REMARK 3 L33: 0.8156 L12: 1.0697 REMARK 3 L13: 0.7756 L23: -0.1889 REMARK 3 S TENSOR REMARK 3 S11: -0.1461 S12: 0.3520 S13: -0.0665 REMARK 3 S21: -0.3198 S22: 0.0267 S23: -0.2798 REMARK 3 S31: 0.0425 S32: 0.0772 S33: 0.1194 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 451 A 488 REMARK 3 ORIGIN FOR THE GROUP (A): 42.1119 5.8969 86.7175 REMARK 3 T TENSOR REMARK 3 T11: 0.1630 T22: 0.2209 REMARK 3 T33: 0.2084 T12: -0.0087 REMARK 3 T13: 0.0428 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.5174 L22: 3.8334 REMARK 3 L33: 2.3176 L12: 0.6120 REMARK 3 L13: 0.9352 L23: -1.2196 REMARK 3 S TENSOR REMARK 3 S11: 0.0110 S12: 0.1149 S13: -0.2239 REMARK 3 S21: -0.3721 S22: 0.0091 S23: -0.3278 REMARK 3 S31: 0.2381 S32: 0.2188 S33: -0.0201 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 489 A 515 REMARK 3 ORIGIN FOR THE GROUP (A): 43.7914 -1.6329 96.0970 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.2112 REMARK 3 T33: 0.2925 T12: 0.0454 REMARK 3 T13: -0.0101 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 2.0062 L22: 3.2549 REMARK 3 L33: 1.1704 L12: 1.9835 REMARK 3 L13: -0.1080 L23: 0.8113 REMARK 3 S TENSOR REMARK 3 S11: 0.0304 S12: 0.0610 S13: -0.0481 REMARK 3 S21: 0.0222 S22: -0.0546 S23: -0.1884 REMARK 3 S31: 0.0192 S32: 0.0674 S33: 0.0242 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 516 A 549 REMARK 3 ORIGIN FOR THE GROUP (A): 43.7172 -14.7102 92.0284 REMARK 3 T TENSOR REMARK 3 T11: 0.1101 T22: 0.1935 REMARK 3 T33: 0.2926 T12: 0.0487 REMARK 3 T13: 0.0648 T23: -0.0272 REMARK 3 L TENSOR REMARK 3 L11: 2.4122 L22: 4.6399 REMARK 3 L33: 2.8041 L12: 1.8418 REMARK 3 L13: 0.6555 L23: 0.7146 REMARK 3 S TENSOR REMARK 3 S11: -0.0613 S12: 0.1590 S13: -0.1698 REMARK 3 S21: -0.2226 S22: -0.0256 S23: -0.2711 REMARK 3 S31: 0.1890 S32: -0.0046 S33: 0.0869 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 550 A 563 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0416 -12.2172 97.7869 REMARK 3 T TENSOR REMARK 3 T11: 0.1978 T22: 0.1887 REMARK 3 T33: 0.2453 T12: -0.0125 REMARK 3 T13: 0.0346 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 4.6923 L22: 5.7001 REMARK 3 L33: 7.4989 L12: 1.5780 REMARK 3 L13: 1.3236 L23: -2.7653 REMARK 3 S TENSOR REMARK 3 S11: -0.1599 S12: -0.2696 S13: 0.2360 REMARK 3 S21: 0.2297 S22: 0.1992 S23: 0.0218 REMARK 3 S31: -0.0511 S32: -0.4565 S33: -0.0394 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 564 A 581 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2504 -12.1749 85.9291 REMARK 3 T TENSOR REMARK 3 T11: 0.2614 T22: 0.4246 REMARK 3 T33: 0.2564 T12: 0.0326 REMARK 3 T13: 0.0312 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 4.1348 L22: 9.2944 REMARK 3 L33: 1.8577 L12: -1.3375 REMARK 3 L13: 1.6839 L23: -3.4356 REMARK 3 S TENSOR REMARK 3 S11: -0.1201 S12: 0.4311 S13: 0.3611 REMARK 3 S21: -0.3361 S22: 0.0442 S23: 0.1211 REMARK 3 S31: -0.0514 S32: -0.1565 S33: 0.0759 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 582 A 592 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2092 -21.5261 99.1104 REMARK 3 T TENSOR REMARK 3 T11: 0.1688 T22: 0.2113 REMARK 3 T33: 0.2351 T12: -0.0197 REMARK 3 T13: 0.0171 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.2423 L22: 2.6396 REMARK 3 L33: 8.7270 L12: -0.7132 REMARK 3 L13: 2.3844 L23: -2.9249 REMARK 3 S TENSOR REMARK 3 S11: -0.1089 S12: 0.1296 S13: -0.1593 REMARK 3 S21: 0.0165 S22: 0.0919 S23: -0.0852 REMARK 3 S31: 0.3292 S32: 0.0902 S33: 0.0170 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 593 A 599 REMARK 3 ORIGIN FOR THE GROUP (A): 36.1876 -25.3605 103.5648 REMARK 3 T TENSOR REMARK 3 T11: 0.2586 T22: 0.3006 REMARK 3 T33: 0.3673 T12: 0.0185 REMARK 3 T13: 0.0019 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 3.9467 L22: 11.9852 REMARK 3 L33: 8.1535 L12: -3.5355 REMARK 3 L13: -3.8618 L23: 1.1423 REMARK 3 S TENSOR REMARK 3 S11: -0.0808 S12: 0.0037 S13: -0.6055 REMARK 3 S21: -0.4231 S22: -0.2473 S23: -0.5685 REMARK 3 S31: 0.6344 S32: 0.6642 S33: 0.3281 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 342 B 360 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2681 7.1494 41.5556 REMARK 3 T TENSOR REMARK 3 T11: 0.5758 T22: 0.1546 REMARK 3 T33: 0.3424 T12: -0.0571 REMARK 3 T13: -0.2028 T23: -0.0405 REMARK 3 L TENSOR REMARK 3 L11: 5.7753 L22: 4.1386 REMARK 3 L33: 7.5056 L12: -4.5068 REMARK 3 L13: -4.0197 L23: 1.4476 REMARK 3 S TENSOR REMARK 3 S11: -0.2050 S12: 0.7164 S13: -0.7293 REMARK 3 S21: 0.0758 S22: -0.4383 S23: 0.4552 REMARK 3 S31: 0.5430 S32: -0.9095 S33: 0.6433 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 361 B 372 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0020 19.7984 41.5670 REMARK 3 T TENSOR REMARK 3 T11: 1.1971 T22: 0.2508 REMARK 3 T33: 0.6743 T12: -0.0065 REMARK 3 T13: 0.2368 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 12.3046 L22: 6.4016 REMARK 3 L33: 0.3961 L12: -7.8753 REMARK 3 L13: -1.1401 L23: 0.1308 REMARK 3 S TENSOR REMARK 3 S11: 0.4075 S12: 0.4149 S13: -0.6193 REMARK 3 S21: 0.8320 S22: -0.2544 S23: 1.0986 REMARK 3 S31: -0.6007 S32: -0.0578 S33: -0.1532 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 373 B 408 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8758 38.4140 51.4452 REMARK 3 T TENSOR REMARK 3 T11: 0.5898 T22: 0.1516 REMARK 3 T33: 0.2411 T12: 0.1451 REMARK 3 T13: 0.0105 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 4.7103 L22: 4.6504 REMARK 3 L33: 2.8393 L12: 1.0307 REMARK 3 L13: -2.0645 L23: 0.4520 REMARK 3 S TENSOR REMARK 3 S11: 0.3201 S12: 0.3249 S13: 0.2569 REMARK 3 S21: 0.0505 S22: 0.0231 S23: 0.6668 REMARK 3 S31: -0.7421 S32: -0.1033 S33: -0.3432 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 409 B 435 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2378 20.3182 50.6407 REMARK 3 T TENSOR REMARK 3 T11: 0.4934 T22: 0.2109 REMARK 3 T33: 0.0449 T12: 0.0725 REMARK 3 T13: -0.0688 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.0150 L22: 6.6919 REMARK 3 L33: 4.9864 L12: 0.6832 REMARK 3 L13: -2.1283 L23: -0.1359 REMARK 3 S TENSOR REMARK 3 S11: -0.1646 S12: 0.0715 S13: -0.0081 REMARK 3 S21: -0.5559 S22: 0.2093 S23: -0.2238 REMARK 3 S31: -0.0225 S32: -0.3132 S33: -0.0448 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 436 B 463 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7522 33.8661 53.8113 REMARK 3 T TENSOR REMARK 3 T11: 0.4932 T22: 0.1205 REMARK 3 T33: 0.2355 T12: 0.1072 REMARK 3 T13: -0.0802 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 4.2486 L22: 4.7083 REMARK 3 L33: 5.2181 L12: -0.5492 REMARK 3 L13: 0.3265 L23: 2.2009 REMARK 3 S TENSOR REMARK 3 S11: 0.0410 S12: 0.1276 S13: 0.0565 REMARK 3 S21: -0.0481 S22: -0.1100 S23: 0.8468 REMARK 3 S31: -0.6953 S32: -0.6442 S33: 0.0691 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 464 B 488 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3338 29.0277 60.9658 REMARK 3 T TENSOR REMARK 3 T11: 0.5178 T22: 0.1699 REMARK 3 T33: 0.1030 T12: 0.1117 REMARK 3 T13: -0.0712 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 1.2447 L22: 8.8241 REMARK 3 L33: 2.0510 L12: 1.5878 REMARK 3 L13: 0.6558 L23: -2.4254 REMARK 3 S TENSOR REMARK 3 S11: 0.0846 S12: -0.2537 S13: -0.0679 REMARK 3 S21: 0.4187 S22: 0.2451 S23: 0.5968 REMARK 3 S31: -0.3493 S32: -0.4224 S33: -0.3297 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 489 B 505 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8067 18.7093 56.5103 REMARK 3 T TENSOR REMARK 3 T11: 0.3328 T22: 0.3444 REMARK 3 T33: 0.1545 T12: -0.0100 REMARK 3 T13: -0.1813 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.4046 L22: 8.3450 REMARK 3 L33: 6.0256 L12: 0.0378 REMARK 3 L13: 0.5679 L23: -5.6799 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: -0.0886 S13: 0.0878 REMARK 3 S21: -0.3864 S22: 0.3718 S23: 0.8225 REMARK 3 S31: 0.1033 S32: -1.0594 S33: -0.4166 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 506 B 514 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7704 18.9601 69.4394 REMARK 3 T TENSOR REMARK 3 T11: 0.2385 T22: 0.2465 REMARK 3 T33: 0.2265 T12: 0.0283 REMARK 3 T13: -0.0104 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 4.7459 L22: 2.2080 REMARK 3 L33: 9.8671 L12: 1.7272 REMARK 3 L13: 0.6645 L23: -1.0442 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.1136 S13: 0.0764 REMARK 3 S21: -0.2268 S22: -0.1378 S23: 0.3695 REMARK 3 S31: -0.1046 S32: -0.3150 S33: 0.1644 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 515 B 536 REMARK 3 ORIGIN FOR THE GROUP (A): 18.2426 20.3156 79.1862 REMARK 3 T TENSOR REMARK 3 T11: 0.1920 T22: 0.2777 REMARK 3 T33: 0.1956 T12: 0.0796 REMARK 3 T13: -0.0047 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 4.3050 L22: 0.9502 REMARK 3 L33: 4.6672 L12: 0.7685 REMARK 3 L13: -0.3059 L23: -0.8542 REMARK 3 S TENSOR REMARK 3 S11: 0.0236 S12: 0.1355 S13: 0.3010 REMARK 3 S21: 0.0747 S22: -0.0195 S23: 0.3833 REMARK 3 S31: -0.6168 S32: -0.4167 S33: -0.0040 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 537 B 548 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4914 14.5781 69.8850 REMARK 3 T TENSOR REMARK 3 T11: 0.1669 T22: 1.1560 REMARK 3 T33: 0.2756 T12: -0.0438 REMARK 3 T13: -0.1962 T23: 0.2694 REMARK 3 L TENSOR REMARK 3 L11: 0.9101 L22: 1.7350 REMARK 3 L33: 8.6640 L12: -1.2447 REMARK 3 L13: -2.7558 L23: 3.8707 REMARK 3 S TENSOR REMARK 3 S11: 0.3737 S12: 0.5852 S13: -0.2213 REMARK 3 S21: -0.3396 S22: -0.8672 S23: 0.2178 REMARK 3 S31: -0.7104 S32: -2.2677 S33: 0.4934 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 549 B 568 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2564 13.2835 70.2494 REMARK 3 T TENSOR REMARK 3 T11: 0.2557 T22: 0.2556 REMARK 3 T33: 0.1025 T12: 0.0493 REMARK 3 T13: 0.0026 T23: 0.0735 REMARK 3 L TENSOR REMARK 3 L11: 5.3322 L22: 6.0618 REMARK 3 L33: 6.7923 L12: 1.3616 REMARK 3 L13: 1.6019 L23: -0.1957 REMARK 3 S TENSOR REMARK 3 S11: 0.1358 S12: 0.3328 S13: -0.0058 REMARK 3 S21: -0.3541 S22: -0.0813 S23: -0.3699 REMARK 3 S31: 0.3384 S32: 0.1902 S33: -0.0545 REMARK 3 REMARK 3 TLS GROUP : 25 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 569 B 587 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2139 16.7800 79.4043 REMARK 3 T TENSOR REMARK 3 T11: 0.2169 T22: 0.2650 REMARK 3 T33: 0.1450 T12: -0.0384 REMARK 3 T13: -0.0026 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 8.3536 L22: 5.7538 REMARK 3 L33: 3.6248 L12: -1.1931 REMARK 3 L13: 1.3399 L23: -1.7764 REMARK 3 S TENSOR REMARK 3 S11: -0.4636 S12: 0.2676 S13: 0.2396 REMARK 3 S21: -0.4555 S22: 0.4912 S23: -0.2021 REMARK 3 S31: -0.4920 S32: -0.2994 S33: -0.0276 REMARK 3 REMARK 3 TLS GROUP : 26 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 588 B 597 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9672 4.9619 74.7169 REMARK 3 T TENSOR REMARK 3 T11: 0.2431 T22: 0.3215 REMARK 3 T33: 0.3367 T12: 0.0677 REMARK 3 T13: 0.0413 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 6.6140 L22: 6.0076 REMARK 3 L33: 1.7779 L12: 1.1383 REMARK 3 L13: -2.5765 L23: -2.5630 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: 1.0246 S13: 0.1108 REMARK 3 S21: -0.7963 S22: 0.0671 S23: -0.0317 REMARK 3 S31: 0.3161 S32: -0.3454 S33: -0.0230 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS, ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. REMARK 4 REMARK 4 3EPZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049630. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.6849 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.97900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA SET USED FOR PHASING WAS COLLECTED AT 0.97937 REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23 % PEG 3350, 0.1 M BIS-TRIS PH REMARK 280 6.0,0.2 M SODIUM ACETATE, 0.005 M TCEP, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K, PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.88400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 333 REMARK 465 HIS A 334 REMARK 465 HIS A 335 REMARK 465 HIS A 336 REMARK 465 HIS A 337 REMARK 465 HIS A 338 REMARK 465 HIS A 339 REMARK 465 SER A 340 REMARK 465 SER A 341 REMARK 465 GLY A 342 REMARK 465 ARG A 343 REMARK 465 GLU A 344 REMARK 465 ASN A 345 REMARK 465 LEU A 346 REMARK 465 TYR A 347 REMARK 465 PHE A 348 REMARK 465 GLN A 349 REMARK 465 ALA A 391 REMARK 465 ASN A 392 REMARK 465 GLU A 393 REMARK 465 SER A 394 REMARK 465 GLY A 395 REMARK 465 PHE A 396 REMARK 465 GLU A 397 REMARK 465 SER A 398 REMARK 465 TYR A 399 REMARK 465 GLU A 400 REMARK 465 TYR A 443 REMARK 465 ASP A 444 REMARK 465 ASP A 445 REMARK 465 ASP A 446 REMARK 465 SER A 448 REMARK 465 LEU A 449 REMARK 465 GLU A 450 REMARK 465 PHE A 469 REMARK 465 ASP A 470 REMARK 465 GLY A 471 REMARK 465 SER A 570 REMARK 465 ASP A 571 REMARK 465 GLU A 572 REMARK 465 ARG A 600 REMARK 465 MSE B 333 REMARK 465 HIS B 334 REMARK 465 HIS B 335 REMARK 465 HIS B 336 REMARK 465 HIS B 337 REMARK 465 HIS B 338 REMARK 465 HIS B 339 REMARK 465 SER B 340 REMARK 465 SER B 341 REMARK 465 GLU B 344 REMARK 465 ASN B 345 REMARK 465 LEU B 346 REMARK 465 TYR B 347 REMARK 465 LYS B 385 REMARK 465 LEU B 386 REMARK 465 SER B 387 REMARK 465 ILE B 388 REMARK 465 PHE B 389 REMARK 465 ASP B 390 REMARK 465 ALA B 391 REMARK 465 ASN B 392 REMARK 465 GLU B 393 REMARK 465 SER B 394 REMARK 465 GLY B 395 REMARK 465 PHE B 396 REMARK 465 GLU B 397 REMARK 465 SER B 398 REMARK 465 TYR B 399 REMARK 465 GLU B 400 REMARK 465 ALA B 401 REMARK 465 PRO B 447 REMARK 465 SER B 448 REMARK 465 LEU B 449 REMARK 465 GLY B 468 REMARK 465 PHE B 469 REMARK 465 ASP B 470 REMARK 465 GLY B 471 REMARK 465 GLY B 472 REMARK 465 GLU B 473 REMARK 465 SER B 570 REMARK 465 ASP B 571 REMARK 465 GLU B 572 REMARK 465 GLN B 598 REMARK 465 ALA B 599 REMARK 465 ARG B 600 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 385 CE NZ REMARK 470 LEU A 386 CG CD1 CD2 REMARK 470 ILE A 388 CD1 REMARK 470 PHE A 389 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 406 CD CE NZ REMARK 470 LYS A 440 CD CE NZ REMARK 470 GLU A 473 CG CD OE1 OE2 REMARK 470 SER A 520 OG REMARK 470 ASP A 521 CG OD1 OD2 REMARK 470 GLU A 525 CG CD OE1 OE2 REMARK 470 GLN A 573 CG CD OE1 NE2 REMARK 470 ARG A 582 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 586 CD CE NZ REMARK 470 GLN B 349 CG CD OE1 NE2 REMARK 470 ASP B 361 CG OD1 OD2 REMARK 470 ASP B 362 CG OD1 OD2 REMARK 470 ASP B 364 CG OD1 OD2 REMARK 470 LYS B 366 CE NZ REMARK 470 GLN B 404 CG CD OE1 NE2 REMARK 470 LYS B 406 CD CE NZ REMARK 470 LYS B 429 CE NZ REMARK 470 ASN B 430 OD1 ND2 REMARK 470 LYS B 440 CE NZ REMARK 470 ILE B 442 CG1 CG2 CD1 REMARK 470 ASP B 444 CG OD1 OD2 REMARK 470 GLU B 450 CG CD OE1 OE2 REMARK 470 LYS B 474 CG CD CE NZ REMARK 470 SER B 538 OG REMARK 470 ASN B 541 CG OD1 ND2 REMARK 470 GLU B 559 CG CD OE1 OE2 REMARK 470 GLU B 566 CG CD OE1 OE2 REMARK 470 GLN B 573 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 473 11.70 59.48 REMARK 500 MSE A 489 -106.35 -95.48 REMARK 500 GLN B 349 31.88 70.22 REMARK 500 LYS B 429 8.33 -68.57 REMARK 500 MSE B 489 -88.58 -110.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 1 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 500 O REMARK 620 2 MSE A 502 O 119.1 REMARK 620 3 LEU A 540 O 80.2 107.7 REMARK 620 4 ASN A 541 O 100.9 139.9 74.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 353 SG REMARK 620 2 CYS A 356 SG 106.9 REMARK 620 3 CYS A 414 SG 118.7 119.6 REMARK 620 4 HIS A 418 ND1 97.8 110.0 101.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 353 SG REMARK 620 2 CYS B 356 SG 126.0 REMARK 620 3 CYS B 414 SG 110.7 110.5 REMARK 620 4 HIS B 418 ND1 103.7 100.6 101.5 REMARK 620 N 1 2 3 DBREF 3EPZ A 351 600 UNP P26358 DNMT1_HUMAN 351 600 DBREF 3EPZ B 351 600 UNP P26358 DNMT1_HUMAN 351 600 SEQADV 3EPZ MSE A 333 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS A 334 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS A 335 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS A 336 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS A 337 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS A 338 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS A 339 UNP P26358 EXPRESSION TAG SEQADV 3EPZ SER A 340 UNP P26358 EXPRESSION TAG SEQADV 3EPZ SER A 341 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLY A 342 UNP P26358 EXPRESSION TAG SEQADV 3EPZ ARG A 343 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLU A 344 UNP P26358 EXPRESSION TAG SEQADV 3EPZ ASN A 345 UNP P26358 EXPRESSION TAG SEQADV 3EPZ LEU A 346 UNP P26358 EXPRESSION TAG SEQADV 3EPZ TYR A 347 UNP P26358 EXPRESSION TAG SEQADV 3EPZ PHE A 348 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLN A 349 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLY A 350 UNP P26358 EXPRESSION TAG SEQADV 3EPZ MSE B 333 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS B 334 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS B 335 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS B 336 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS B 337 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS B 338 UNP P26358 EXPRESSION TAG SEQADV 3EPZ HIS B 339 UNP P26358 EXPRESSION TAG SEQADV 3EPZ SER B 340 UNP P26358 EXPRESSION TAG SEQADV 3EPZ SER B 341 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLY B 342 UNP P26358 EXPRESSION TAG SEQADV 3EPZ ARG B 343 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLU B 344 UNP P26358 EXPRESSION TAG SEQADV 3EPZ ASN B 345 UNP P26358 EXPRESSION TAG SEQADV 3EPZ LEU B 346 UNP P26358 EXPRESSION TAG SEQADV 3EPZ TYR B 347 UNP P26358 EXPRESSION TAG SEQADV 3EPZ PHE B 348 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLN B 349 UNP P26358 EXPRESSION TAG SEQADV 3EPZ GLY B 350 UNP P26358 EXPRESSION TAG SEQRES 1 A 268 MSE HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 268 LEU TYR PHE GLN GLY PRO LYS CYS ILE GLN CYS GLY GLN SEQRES 3 A 268 TYR LEU ASP ASP PRO ASP LEU LYS TYR GLY GLN HIS PRO SEQRES 4 A 268 PRO ASP ALA VAL ASP GLU PRO GLN MSE LEU THR ASN GLU SEQRES 5 A 268 LYS LEU SER ILE PHE ASP ALA ASN GLU SER GLY PHE GLU SEQRES 6 A 268 SER TYR GLU ALA LEU PRO GLN HIS LYS LEU THR CYS PHE SEQRES 7 A 268 SER VAL TYR CYS LYS HIS GLY HIS LEU CYS PRO ILE ASP SEQRES 8 A 268 THR GLY LEU ILE GLU LYS ASN ILE GLU LEU PHE PHE SER SEQRES 9 A 268 GLY SER ALA LYS PRO ILE TYR ASP ASP ASP PRO SER LEU SEQRES 10 A 268 GLU GLY GLY VAL ASN GLY LYS ASN LEU GLY PRO ILE ASN SEQRES 11 A 268 GLU TRP TRP ILE THR GLY PHE ASP GLY GLY GLU LYS ALA SEQRES 12 A 268 LEU ILE GLY PHE SER THR SER PHE ALA GLU TYR ILE LEU SEQRES 13 A 268 MSE ASP PRO SER PRO GLU TYR ALA PRO ILE PHE GLY LEU SEQRES 14 A 268 MSE GLN GLU LYS ILE TYR ILE SER LYS ILE VAL VAL GLU SEQRES 15 A 268 PHE LEU GLN SER ASN SER ASP SER THR TYR GLU ASP LEU SEQRES 16 A 268 ILE ASN LYS ILE GLU THR THR VAL PRO PRO SER GLY LEU SEQRES 17 A 268 ASN LEU ASN ARG PHE THR GLU ASP SER LEU LEU ARG HIS SEQRES 18 A 268 ALA GLN PHE VAL VAL GLU GLN VAL GLU SER TYR ASP GLU SEQRES 19 A 268 ALA GLY ASP SER ASP GLU GLN PRO ILE PHE LEU THR PRO SEQRES 20 A 268 CYS MSE ARG ASP LEU ILE LYS LEU ALA GLY VAL THR LEU SEQRES 21 A 268 GLY GLN ARG ARG ALA GLN ALA ARG SEQRES 1 B 268 MSE HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 268 LEU TYR PHE GLN GLY PRO LYS CYS ILE GLN CYS GLY GLN SEQRES 3 B 268 TYR LEU ASP ASP PRO ASP LEU LYS TYR GLY GLN HIS PRO SEQRES 4 B 268 PRO ASP ALA VAL ASP GLU PRO GLN MSE LEU THR ASN GLU SEQRES 5 B 268 LYS LEU SER ILE PHE ASP ALA ASN GLU SER GLY PHE GLU SEQRES 6 B 268 SER TYR GLU ALA LEU PRO GLN HIS LYS LEU THR CYS PHE SEQRES 7 B 268 SER VAL TYR CYS LYS HIS GLY HIS LEU CYS PRO ILE ASP SEQRES 8 B 268 THR GLY LEU ILE GLU LYS ASN ILE GLU LEU PHE PHE SER SEQRES 9 B 268 GLY SER ALA LYS PRO ILE TYR ASP ASP ASP PRO SER LEU SEQRES 10 B 268 GLU GLY GLY VAL ASN GLY LYS ASN LEU GLY PRO ILE ASN SEQRES 11 B 268 GLU TRP TRP ILE THR GLY PHE ASP GLY GLY GLU LYS ALA SEQRES 12 B 268 LEU ILE GLY PHE SER THR SER PHE ALA GLU TYR ILE LEU SEQRES 13 B 268 MSE ASP PRO SER PRO GLU TYR ALA PRO ILE PHE GLY LEU SEQRES 14 B 268 MSE GLN GLU LYS ILE TYR ILE SER LYS ILE VAL VAL GLU SEQRES 15 B 268 PHE LEU GLN SER ASN SER ASP SER THR TYR GLU ASP LEU SEQRES 16 B 268 ILE ASN LYS ILE GLU THR THR VAL PRO PRO SER GLY LEU SEQRES 17 B 268 ASN LEU ASN ARG PHE THR GLU ASP SER LEU LEU ARG HIS SEQRES 18 B 268 ALA GLN PHE VAL VAL GLU GLN VAL GLU SER TYR ASP GLU SEQRES 19 B 268 ALA GLY ASP SER ASP GLU GLN PRO ILE PHE LEU THR PRO SEQRES 20 B 268 CYS MSE ARG ASP LEU ILE LYS LEU ALA GLY VAL THR LEU SEQRES 21 B 268 GLY GLN ARG ARG ALA GLN ALA ARG MODRES 3EPZ MSE A 380 MET SELENOMETHIONINE MODRES 3EPZ MSE A 489 MET SELENOMETHIONINE MODRES 3EPZ MSE A 502 MET SELENOMETHIONINE MODRES 3EPZ MSE A 581 MET SELENOMETHIONINE MODRES 3EPZ MSE B 380 MET SELENOMETHIONINE MODRES 3EPZ MSE B 489 MET SELENOMETHIONINE MODRES 3EPZ MSE B 502 MET SELENOMETHIONINE MODRES 3EPZ MSE B 581 MET SELENOMETHIONINE HET MSE A 380 8 HET MSE A 489 8 HET MSE A 502 8 HET MSE A 581 8 HET MSE B 380 8 HET MSE B 489 8 HET MSE B 502 8 HET MSE B 581 8 HET ZN A 701 1 HET BGC A 702 12 HET GOL A 703 6 HET NA A 1 1 HET ZN B 701 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 ZN 2(ZN 2+) FORMUL 4 BGC C6 H12 O6 FORMUL 5 GOL C3 H8 O3 FORMUL 6 NA NA 1+ FORMUL 8 HOH *91(H2 O) HELIX 1 2 TYR A 495 GLY A 500 1 6 HELIX 2 3 GLN A 503 ASN A 519 1 17 HELIX 3 4 THR A 523 THR A 534 1 12 HELIX 4 5 PRO A 537 ASN A 541 5 5 HELIX 5 6 THR A 546 ARG A 552 1 7 HELIX 6 7 HIS A 553 ALA A 567 1 15 HELIX 7 8 PRO A 574 LEU A 577 5 4 HELIX 8 9 THR A 578 ALA A 588 1 11 HELIX 9 10 THR A 591 ALA A 597 1 7 HELIX 10 11 ASP B 376 THR B 382 1 7 HELIX 11 12 TYR B 495 GLY B 500 1 6 HELIX 12 13 GLN B 503 ASN B 519 1 17 HELIX 13 14 THR B 523 THR B 534 1 12 HELIX 14 15 PRO B 537 ASN B 541 5 5 HELIX 15 16 THR B 546 HIS B 553 1 8 HELIX 16 17 HIS B 553 GLU B 566 1 14 HELIX 17 18 THR B 578 GLY B 589 1 12 HELIX 18 19 THR B 591 ARG B 596 1 6 SHEET 1 A 6 VAL A 453 LEU A 458 0 SHEET 2 A 6 PHE A 434 PRO A 441 -1 N GLY A 437 O GLY A 455 SHEET 3 A 6 HIS A 405 TYR A 413 -1 N TYR A 413 O PHE A 434 SHEET 4 A 6 GLU A 485 LEU A 488 1 O ILE A 487 N HIS A 405 SHEET 5 A 6 ILE A 477 SER A 480 -1 N ILE A 477 O LEU A 488 SHEET 6 A 6 GLU A 463 ILE A 466 -1 N GLU A 463 O SER A 480 SHEET 1 B 6 VAL B 453 GLY B 455 0 SHEET 2 B 6 PHE B 434 LYS B 440 -1 N ALA B 439 O VAL B 453 SHEET 3 B 6 GLN B 404 TYR B 413 -1 N TYR B 413 O PHE B 434 SHEET 4 B 6 GLU B 485 LEU B 488 1 O ILE B 487 N HIS B 405 SHEET 5 B 6 LEU B 476 SER B 480 -1 N ILE B 477 O LEU B 488 SHEET 6 B 6 GLU B 463 THR B 467 -1 N TRP B 465 O GLY B 478 LINK C GLN A 379 N MSE A 380 1555 1555 1.33 LINK C MSE A 380 N LEU A 381 1555 1555 1.33 LINK C LEU A 488 N MSE A 489 1555 1555 1.34 LINK C MSE A 489 N ASP A 490 1555 1555 1.33 LINK C LEU A 501 N MSE A 502 1555 1555 1.33 LINK C MSE A 502 N GLN A 503 1555 1555 1.33 LINK C CYS A 580 N MSE A 581 1555 1555 1.34 LINK C MSE A 581 N ARG A 582 1555 1555 1.34 LINK C GLN B 379 N MSE B 380 1555 1555 1.33 LINK C MSE B 380 N LEU B 381 1555 1555 1.33 LINK C LEU B 488 N MSE B 489 1555 1555 1.33 LINK C MSE B 489 N ASP B 490 1555 1555 1.33 LINK C LEU B 501 N MSE B 502 1555 1555 1.33 LINK C MSE B 502 N GLN B 503 1555 1555 1.33 LINK C CYS B 580 N MSE B 581 1555 1555 1.33 LINK C MSE B 581 N ARG B 582 1555 1555 1.33 LINK NA NA A 1 O GLY A 500 1555 1555 2.43 LINK NA NA A 1 O MSE A 502 1555 1555 2.68 LINK NA NA A 1 O LEU A 540 1555 1555 2.37 LINK NA NA A 1 O ASN A 541 1555 1555 3.08 LINK SG CYS A 353 ZN ZN A 701 1555 1555 2.39 LINK SG CYS A 356 ZN ZN A 701 1555 1555 2.19 LINK SG CYS A 414 ZN ZN A 701 1555 1555 2.25 LINK ND1 HIS A 418 ZN ZN A 701 1555 1555 2.10 LINK SG CYS B 353 ZN ZN B 701 1555 1555 2.29 LINK SG CYS B 356 ZN ZN B 701 1555 1555 2.61 LINK SG CYS B 414 ZN ZN B 701 1555 1555 2.47 LINK ND1 HIS B 418 ZN ZN B 701 1555 1555 2.04 CISPEP 1 GLY A 459 PRO A 460 0 9.55 CISPEP 2 GLY B 459 PRO B 460 0 -4.82 CRYST1 57.544 59.768 96.286 90.00 92.31 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017378 0.000000 0.000701 0.00000 SCALE2 0.000000 0.016731 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010394 0.00000