PDB Short entry for 3F1I HEADER PROTEIN BINDING 28-OCT-08 3F1I TITLE HUMAN ESCRT-0 CORE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE COMPND 3 SUBSTRATE; COMPND 4 CHAIN: H; COMPND 5 FRAGMENT: HELICAL DOMAIN; COMPND 6 SYNONYM: PROTEIN PP110, HRS; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SIGNAL TRANSDUCING ADAPTER MOLECULE 1; COMPND 10 CHAIN: S, C; COMPND 11 FRAGMENT: HELICAL DOMAIN; COMPND 12 SYNONYM: STAM-1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HEPATOCYTE GROWTH FACTOR REGULATED TYROSINE KINASE SUBSTRATE SOURCE 6 (HGS), HGS, HRS; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3) PLYS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASIMD; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PST39; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: SIGNAL TRANSDUCING ADAPTOR MOLECULE (STAM), STAM, STAM1; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3) PLYS; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PST39 KEYWDS HGS, STAM, ESCRT, UBIQUITIN, MVB, ENDOSOME, MEMBRANE, METAL-BINDING, KEYWDS 2 PHOSPHOPROTEIN, PROTEIN TRANSPORT, TRANSPORT, ZINC-FINGER, SH3 KEYWDS 3 DOMAIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR X.REN,D.P.KLOER,Y.KIM,R.GHIRLANDO,L.SAIDI,G.HUMMER,J.H.HURLEY REVDAT 3 27-DEC-23 3F1I 1 REMARK REVDAT 2 13-JUL-11 3F1I 1 VERSN REVDAT 1 24-MAR-09 3F1I 0 JRNL AUTH X.REN,D.P.KLOER,Y.C.KIM,R.GHIRLANDO,L.F.SAIDI,G.HUMMER, JRNL AUTH 2 J.H.HURLEY JRNL TITL HYBRID STRUCTURAL MODEL OF THE COMPLETE HUMAN ESCRT-0 JRNL TITL 2 COMPLEX. JRNL REF STRUCTURE V. 17 406 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 19278655 JRNL DOI 10.1016/J.STR.2009.01.012 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 19005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1019 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1301 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1614 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 28 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.29000 REMARK 3 B22 (A**2) : 1.29000 REMARK 3 B33 (A**2) : -2.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.204 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.175 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.134 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.815 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1632 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1135 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2188 ; 1.388 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2782 ; 0.938 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 196 ; 4.974 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;35.919 ;25.393 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 331 ;16.136 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;13.944 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 244 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1787 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 290 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 371 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1047 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 770 ; 0.167 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 863 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 30 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.357 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 21 ; 0.286 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1316 ; 0.852 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 395 ; 0.173 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1590 ; 1.000 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 699 ; 2.132 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 598 ; 3.098 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 64 C 90 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7210 -1.2307 0.2960 REMARK 3 T TENSOR REMARK 3 T11: 0.4824 T22: 0.4935 REMARK 3 T33: 0.4809 T12: -0.0079 REMARK 3 T13: -0.0007 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.2553 L22: 1.6675 REMARK 3 L33: 1.3544 L12: -0.2475 REMARK 3 L13: -0.0839 L23: 0.2373 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.0405 S13: 0.1297 REMARK 3 S21: 0.0351 S22: 0.0006 S23: 0.0865 REMARK 3 S31: -0.1442 S32: -0.1265 S33: -0.0001 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 404 H 439 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2404 -10.8850 -5.0933 REMARK 3 T TENSOR REMARK 3 T11: -0.2657 T22: -0.0271 REMARK 3 T33: -0.1719 T12: 0.0412 REMARK 3 T13: 0.0305 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 7.1770 L22: 9.4113 REMARK 3 L33: 16.5089 L12: -1.9763 REMARK 3 L13: -3.3252 L23: 9.4631 REMARK 3 S TENSOR REMARK 3 S11: 0.3659 S12: -0.9366 S13: 0.3484 REMARK 3 S21: -0.2178 S22: 0.3760 S23: -0.8126 REMARK 3 S31: 0.4640 S32: 1.1166 S33: -0.7418 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 440 H 472 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0695 -5.8812 10.5153 REMARK 3 T TENSOR REMARK 3 T11: -0.2188 T22: 0.0679 REMARK 3 T33: -0.2150 T12: 0.0637 REMARK 3 T13: 0.0263 T23: 0.0611 REMARK 3 L TENSOR REMARK 3 L11: 30.7832 L22: 10.2200 REMARK 3 L33: 10.2831 L12: -17.4329 REMARK 3 L13: -17.6381 L23: 9.9390 REMARK 3 S TENSOR REMARK 3 S11: -0.3867 S12: -1.0008 S13: -0.2055 REMARK 3 S21: 0.2712 S22: 0.4773 S23: 0.1060 REMARK 3 S31: 0.2631 S32: 1.1018 S33: -0.0906 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 473 H 501 REMARK 3 ORIGIN FOR THE GROUP (A): -18.1886 10.3785 19.5209 REMARK 3 T TENSOR REMARK 3 T11: -0.1691 T22: 0.0688 REMARK 3 T33: -0.2158 T12: 0.0696 REMARK 3 T13: -0.0637 T23: -0.0947 REMARK 3 L TENSOR REMARK 3 L11: 54.5088 L22: 8.0465 REMARK 3 L33: 4.5522 L12: -12.1305 REMARK 3 L13: -7.8509 L23: 1.5506 REMARK 3 S TENSOR REMARK 3 S11: 0.3096 S12: 0.2639 S13: 0.3136 REMARK 3 S21: -0.3388 S22: -0.3735 S23: 0.5712 REMARK 3 S31: -0.4477 S32: -1.1198 S33: 0.0639 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 301 S 324 REMARK 3 ORIGIN FOR THE GROUP (A): -3.8524 11.8891 25.7938 REMARK 3 T TENSOR REMARK 3 T11: -0.1120 T22: -0.2547 REMARK 3 T33: -0.0999 T12: 0.0008 REMARK 3 T13: 0.0029 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 25.9874 L22: 4.0723 REMARK 3 L33: 6.9106 L12: -4.7085 REMARK 3 L13: -7.4395 L23: 1.6593 REMARK 3 S TENSOR REMARK 3 S11: 0.3557 S12: -0.2058 S13: 1.5227 REMARK 3 S21: 0.1512 S22: -0.0253 S23: -0.4217 REMARK 3 S31: -0.4603 S32: -0.0974 S33: -0.3304 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 325 S 359 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6856 9.8232 12.5348 REMARK 3 T TENSOR REMARK 3 T11: -0.0691 T22: -0.1562 REMARK 3 T33: -0.0377 T12: -0.0009 REMARK 3 T13: 0.0981 T23: 0.1557 REMARK 3 L TENSOR REMARK 3 L11: 31.5938 L22: 25.9457 REMARK 3 L33: 18.2734 L12: -26.9837 REMARK 3 L13: -22.6409 L23: 21.6736 REMARK 3 S TENSOR REMARK 3 S11: 1.0894 S12: 0.8032 S13: 1.3192 REMARK 3 S21: -0.9176 S22: -0.5902 S23: -0.6129 REMARK 3 S31: -1.1870 S32: -0.3699 S33: -0.4992 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 360 S 377 REMARK 3 ORIGIN FOR THE GROUP (A): 31.2233 -18.4660 -3.2425 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: -0.0902 REMARK 3 T33: -0.1641 T12: -0.0003 REMARK 3 T13: 0.0501 T23: 0.0844 REMARK 3 L TENSOR REMARK 3 L11: 14.1657 L22: 17.9201 REMARK 3 L33: 13.9081 L12: -10.6381 REMARK 3 L13: -6.1074 L23: 9.1428 REMARK 3 S TENSOR REMARK 3 S11: -0.3599 S12: -0.3643 S13: -1.2397 REMARK 3 S21: 0.1580 S22: 0.3361 S23: 0.5641 REMARK 3 S31: 2.0241 S32: -0.1776 S33: 0.0238 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3F1I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000050028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20041 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 69.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% MPD, 100 MM CACL2, 0.1 M SODIUM REMARK 280 ACETATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.02950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 39.02950 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.42450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.02950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.21225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.02950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 114.63675 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.02950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.02950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.42450 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 39.02950 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 114.63675 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 39.02950 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 38.21225 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, S, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE C 301 REMARK 465 ILE C 302 REMARK 465 ASP C 303 REMARK 465 GLU C 304 REMARK 465 ASP C 305 REMARK 465 LYS C 306 REMARK 465 MET C 307 REMARK 465 ASP C 308 REMARK 465 GLN C 309 REMARK 465 LEU C 310 REMARK 465 LEU C 311 REMARK 465 GLN C 312 REMARK 465 MET C 313 REMARK 465 LEU C 314 REMARK 465 GLN C 315 REMARK 465 SER C 316 REMARK 465 THR C 317 REMARK 465 ASP C 318 REMARK 465 PRO C 319 REMARK 465 SER C 320 REMARK 465 ASP C 321 REMARK 465 ASP C 322 REMARK 465 GLN C 323 REMARK 465 PRO C 324 REMARK 465 ASP C 325 REMARK 465 LEU C 326 REMARK 465 PRO C 327 REMARK 465 GLU C 328 REMARK 465 LEU C 329 REMARK 465 LEU C 330 REMARK 465 HIS C 331 REMARK 465 LEU C 332 REMARK 465 GLU C 333 REMARK 465 ALA C 334 REMARK 465 MET C 335 REMARK 465 CYS C 336 REMARK 465 HIS C 337 REMARK 465 VAL C 362 REMARK 465 LYS C 363 REMARK 465 VAL C 364 REMARK 465 MET C 365 REMARK 465 GLU C 366 REMARK 465 ALA C 367 REMARK 465 LEU C 368 REMARK 465 SER C 369 REMARK 465 LEU C 370 REMARK 465 TYR C 371 REMARK 465 THR C 372 REMARK 465 LYS C 373 REMARK 465 LEU C 374 REMARK 465 MET C 375 REMARK 465 ASN C 376 REMARK 465 GLU C 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP H 472 OD2 ASP H 479 6555 1.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU H 493 CD GLU H 493 OE1 0.097 REMARK 500 REMARK 500 REMARK: NULL DBREF 3F1I H 404 501 UNP O14964 HGS_HUMAN 404 501 DBREF 3F1I S 301 377 UNP Q92783 STAM1_HUMAN 301 377 DBREF 3F1I C 301 377 UNP Q92783 STAM1_HUMAN 301 377 SEQRES 1 H 98 SER HIS GLU GLN PHE LEU LYS ALA LEU GLN ASN ALA VAL SEQRES 2 H 98 THR THR PHE VAL ASN ARG MET LYS SER ASN HIS MET ARG SEQRES 3 H 98 GLY ARG SER ILE THR ASN ASP SER ALA VAL LEU SER LEU SEQRES 4 H 98 PHE GLN SER ILE ASN GLY MET HIS PRO GLN LEU LEU GLU SEQRES 5 H 98 LEU LEU ASN GLN LEU ASP GLU ARG ARG LEU TYR TYR GLU SEQRES 6 H 98 GLY LEU GLN ASP LYS LEU ALA GLN ILE ARG ASP ALA ARG SEQRES 7 H 98 GLY ALA LEU SER ALA LEU ARG GLU GLU HIS ARG GLU LYS SEQRES 8 H 98 LEU ARG ARG ALA ALA GLU GLU SEQRES 1 S 77 PHE ILE ASP GLU ASP LYS MET ASP GLN LEU LEU GLN MET SEQRES 2 S 77 LEU GLN SER THR ASP PRO SER ASP ASP GLN PRO ASP LEU SEQRES 3 S 77 PRO GLU LEU LEU HIS LEU GLU ALA MET CYS HIS GLN MET SEQRES 4 S 77 GLY PRO LEU ILE ASP GLU LYS LEU GLU ASP ILE ASP ARG SEQRES 5 S 77 LYS HIS SER GLU LEU SER GLU LEU ASN VAL LYS VAL MET SEQRES 6 S 77 GLU ALA LEU SER LEU TYR THR LYS LEU MET ASN GLU SEQRES 1 C 77 PHE ILE ASP GLU ASP LYS MET ASP GLN LEU LEU GLN MET SEQRES 2 C 77 LEU GLN SER THR ASP PRO SER ASP ASP GLN PRO ASP LEU SEQRES 3 C 77 PRO GLU LEU LEU HIS LEU GLU ALA MET CYS HIS GLN MET SEQRES 4 C 77 GLY PRO LEU ILE ASP GLU LYS LEU GLU ASP ILE ASP ARG SEQRES 5 C 77 LYS HIS SER GLU LEU SER GLU LEU ASN VAL LYS VAL MET SEQRES 6 C 77 GLU ALA LEU SER LEU TYR THR LYS LEU MET ASN GLU FORMUL 4 HOH *28(H2 O) HELIX 1 1 SER H 404 ARG H 429 1 26 HELIX 2 2 SER H 432 ASN H 435 5 4 HELIX 3 3 ASP H 436 GLU H 500 1 65 HELIX 4 4 ASP S 303 SER S 316 1 14 HELIX 5 5 LEU S 326 ASN S 376 1 51 HELIX 6 6 GLN C 338 ASN C 361 1 24 CRYST1 78.059 78.059 152.849 90.00 90.00 90.00 I 41 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012811 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012811 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006542 0.00000