PDB Short entry for 3FQU HEADER IMMUNE SYSTEM 07-JAN-09 3FQU TITLE PHOSPHORYLATION OF SELF-PEPTIDES ALTERS HUMAN LEUKOCYTE ANTIGEN CLASS TITLE 2 I-RESTRICTED ANTIGEN PRESENTATION AND GENERATES TUMOR SPECIFIC TITLE 3 EPITOPES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAINS ALPHA1, ALPHA2, ALPHA3, UNP RESIDUES COMPND 5 25-299; COMPND 6 SYNONYM: MHC CLASS I ANTIGEN A*2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: PHOSPHO-PEPTIDE 38-46 FROM CELL DIVISION CYCLE 25B COMPND 14 (CDC25B): GLLG(SEP)PVRA; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-A, HLAA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 30; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: B2M; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET 30; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS IMMUNE SYSTEM, PHOSPHORYLATION, GLYCOPROTEIN, IMMUNE RESPONSE, KEYWDS 2 MEMBRANE, MHC I, PHOSPHOPROTEIN, TRANSMEMBRANE, DISEASE MUTATION, KEYWDS 3 IMMUNOGLOBULIN DOMAIN, PYRROLIDONE CARBOXYLIC ACID, SECRETED, KEYWDS 4 CANCER, TCR, SELF-EPITOPE EXPDTA X-RAY DIFFRACTION AUTHOR J.PETERSEN,J.ROSSJOHN REVDAT 5 01-NOV-23 3FQU 1 REMARK LINK REVDAT 4 01-NOV-17 3FQU 1 REMARK REVDAT 3 13-JUL-11 3FQU 1 VERSN REVDAT 2 10-MAR-09 3FQU 1 JRNL REVDAT 1 03-MAR-09 3FQU 0 JRNL AUTH J.PETERSEN,S.J.WURZBACHER,N.A.WILLIAMSON,S.H.RAMARATHINAM, JRNL AUTH 2 H.H.REID,A.K.NAIR,A.Y.ZHAO,R.NASTOVSKA,G.RUDGE,J.ROSSJOHN, JRNL AUTH 3 A.W.PURCELL JRNL TITL PHOSPHORYLATED SELF-PEPTIDES ALTER HUMAN LEUKOCYTE ANTIGEN JRNL TITL 2 CLASS I-RESTRICTED ANTIGEN PRESENTATION AND GENERATE JRNL TITL 3 TUMOR-SPECIFIC EPITOPES JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 2776 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19196958 JRNL DOI 10.1073/PNAS.0812901106 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 49810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9600 - 4.7120 0.98 2770 136 0.1750 0.1790 REMARK 3 2 4.7120 - 3.7420 0.99 2686 141 0.1370 0.1640 REMARK 3 3 3.7420 - 3.2700 1.00 2658 154 0.1520 0.2140 REMARK 3 4 3.2700 - 2.9710 1.00 2636 141 0.1720 0.1940 REMARK 3 5 2.9710 - 2.7580 1.00 2625 147 0.1740 0.2100 REMARK 3 6 2.7580 - 2.5960 1.00 2635 155 0.1700 0.2010 REMARK 3 7 2.5960 - 2.4660 1.00 2671 117 0.1700 0.1970 REMARK 3 8 2.4660 - 2.3590 1.00 2598 129 0.1680 0.2080 REMARK 3 9 2.3590 - 2.2680 1.00 2618 161 0.1670 0.2000 REMARK 3 10 2.2680 - 2.1900 1.00 2602 131 0.1580 0.2130 REMARK 3 11 2.1900 - 2.1210 1.00 2634 121 0.1640 0.1620 REMARK 3 12 2.1210 - 2.0600 1.00 2600 125 0.1640 0.1840 REMARK 3 13 2.0600 - 2.0060 1.00 2585 146 0.1660 0.2120 REMARK 3 14 2.0060 - 1.9570 1.00 2622 134 0.1720 0.2180 REMARK 3 15 1.9570 - 1.9130 1.00 2596 150 0.1830 0.2400 REMARK 3 16 1.9130 - 1.8720 1.00 2588 117 0.1880 0.2110 REMARK 3 17 1.8720 - 1.8350 1.00 2593 154 0.1960 0.2370 REMARK 3 18 1.8350 - 1.8000 1.00 2576 158 0.2260 0.2730 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 47.19 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52100 REMARK 3 B22 (A**2) : 0.15100 REMARK 3 B33 (A**2) : -0.67200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3315 REMARK 3 ANGLE : 1.142 4511 REMARK 3 CHIRALITY : 0.086 458 REMARK 3 PLANARITY : 0.005 591 REMARK 3 DIHEDRAL : 15.167 1210 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 1-181) OR CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -6.3285 -12.1949 41.9199 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.1384 REMARK 3 T33: 0.1445 T12: 0.0139 REMARK 3 T13: -0.0232 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.3212 L22: 1.6192 REMARK 3 L33: 1.3033 L12: -0.0484 REMARK 3 L13: -0.1914 L23: -0.0864 REMARK 3 S TENSOR REMARK 3 S11: -0.1032 S12: -0.1460 S13: -0.0430 REMARK 3 S21: 0.1244 S22: -0.0047 S23: -0.2240 REMARK 3 S31: -0.0281 S32: 0.0114 S33: 0.0944 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 182-275) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5532 14.4185 21.0966 REMARK 3 T TENSOR REMARK 3 T11: 0.1621 T22: 0.1819 REMARK 3 T33: 0.1758 T12: 0.0124 REMARK 3 T13: 0.0205 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.9276 L22: 0.4755 REMARK 3 L33: 0.9004 L12: -0.5327 REMARK 3 L13: -0.0150 L23: -0.1161 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: -0.0515 S13: 0.0148 REMARK 3 S21: 0.0714 S22: -0.0050 S23: 0.0440 REMARK 3 S31: -0.0932 S32: -0.1936 S33: 0.0250 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -8.0874 -4.4795 15.5661 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.1396 REMARK 3 T33: 0.1278 T12: -0.0148 REMARK 3 T13: 0.0263 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.8028 L22: 1.5571 REMARK 3 L33: 1.1488 L12: -0.2549 REMARK 3 L13: -0.3161 L23: -0.5723 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: 0.1236 S13: -0.0382 REMARK 3 S21: -0.3719 S22: -0.0160 S23: -0.0825 REMARK 3 S31: 0.1700 S32: -0.0542 S33: 0.0433 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050928. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49869 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.46600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3FQW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG3350, 3MM CDCL2, 3MM MGCL2, REMARK 280 0.1M NACL, PH7.4, TEMPERATURE 293K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.95550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.18350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.02150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.18350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.95550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.02150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 GLN B 88 CG CD OE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 273 CA CB CG CD NE CZ NH1 REMARK 480 ARG A 273 NH2 REMARK 480 GLU B 43 CA CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 198 CD CD A 279 3455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 17 132.15 -176.73 REMARK 500 ASP A 29 -128.30 49.63 REMARK 500 TYR A 123 -71.45 -116.84 REMARK 500 HIS A 197 12.90 -146.60 REMARK 500 TRP B 59 -4.93 76.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 281 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 1 N REMARK 620 2 HIS A 3 NE2 118.4 REMARK 620 3 HOH A 339 O 145.1 93.4 REMARK 620 4 HOH A 353 O 95.5 93.4 96.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 284 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 19 OE1 REMARK 620 2 GLU A 19 OE2 53.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 282 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 30 OD1 REMARK 620 2 ASP A 30 OD2 52.9 REMARK 620 3 GLU A 212 OE1 132.4 80.6 REMARK 620 4 GLU A 212 OE2 153.5 134.4 57.6 REMARK 620 5 HOH A 480 O 74.7 96.8 104.9 78.9 REMARK 620 6 HOH A 532 O 95.3 84.7 89.4 110.2 165.7 REMARK 620 7 HOH A 556 O 97.7 146.2 129.8 79.4 89.3 81.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 280 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 151 ND1 REMARK 620 2 GLU A 154 OE1 100.0 REMARK 620 3 GLU A 154 OE2 96.5 54.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 279 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 361 O REMARK 620 2 HOH A 398 O 84.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 100 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 461 O REMARK 620 2 HIS B 50 NE2 98.1 REMARK 620 3 HOH B 375 O 157.2 88.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 280 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 284 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 99 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 100 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FQN RELATED DB: PDB REMARK 900 RELATED ID: 3FQR RELATED DB: PDB REMARK 900 RELATED ID: 3FQT RELATED DB: PDB REMARK 900 RELATED ID: 3FQW RELATED DB: PDB REMARK 900 RELATED ID: 3FQX RELATED DB: PDB DBREF 3FQU A 1 275 UNP P01892 1A02_HUMAN 25 299 DBREF 3FQU B 1 98 UNP P61769 B2MG_HUMAN 22 119 DBREF 3FQU C 1 9 PDB 3FQU 3FQU 1 9 SEQRES 1 A 275 GLY SER HIS SER MET ARG TYR PHE PHE THR SER VAL SER SEQRES 2 A 275 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 275 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 275 ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 275 GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR ARG SEQRES 6 A 275 LYS VAL LYS ALA HIS SER GLN THR HIS ARG VAL ASP LEU SEQRES 7 A 275 GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 275 SER HIS THR VAL GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 275 SER ASP TRP ARG PHE LEU ARG GLY TYR HIS GLN TYR ALA SEQRES 10 A 275 TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU ASP LEU SEQRES 11 A 275 ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN THR THR SEQRES 12 A 275 LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU GLN LEU SEQRES 13 A 275 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 A 275 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG THR SEQRES 15 A 275 ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA VAL SER SEQRES 16 A 275 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SER PHE SEQRES 17 A 275 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 275 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 275 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 275 VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 275 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 275 TRP GLU SEQRES 1 B 98 GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS PRO SEQRES 2 B 98 ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR VAL SEQRES 3 B 98 SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU LEU SEQRES 4 B 98 LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER ASP SEQRES 5 B 98 LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU TYR SEQRES 6 B 98 TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR ALA SEQRES 7 B 98 CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS ILE SEQRES 8 B 98 VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 GLY LEU LEU GLY SEP PRO VAL ARG ALA MODRES 3FQU SEP C 5 SER PHOSPHOSERINE HET SEP C 5 20 HET GOL A 276 6 HET GOL A 277 6 HET GOL A 278 6 HET CD A 279 2 HET CD A 280 1 HET CD A 281 1 HET CD A 282 1 HET CD A 283 1 HET MG A 284 1 HET GOL B 99 6 HET CD B 100 1 HETNAM SEP PHOSPHOSERINE HETNAM GOL GLYCEROL HETNAM CD CADMIUM ION HETNAM MG MAGNESIUM ION HETSYN SEP PHOSPHONOSERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SEP C3 H8 N O6 P FORMUL 4 GOL 4(C3 H8 O3) FORMUL 7 CD 6(CD 2+) FORMUL 12 MG MG 2+ FORMUL 15 HOH *414(H2 O) HELIX 1 1 ALA A 49 GLU A 53 5 5 HELIX 2 2 GLY A 56 TYR A 85 1 30 HELIX 3 3 ASP A 137 ALA A 150 1 14 HELIX 4 4 HIS A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 GLY A 175 GLN A 180 1 6 HELIX 7 7 GLN A 253 GLN A 255 5 3 SHEET 1 A 8 GLU A 46 PRO A 47 0 SHEET 2 A 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 A 8 HIS A 3 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 A 8 THR A 94 VAL A 103 -1 O VAL A 103 N HIS A 3 SHEET 6 A 8 PHE A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 LYS A 121 LEU A 126 -1 O LEU A 126 N HIS A 114 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 ALA A 193 0 SHEET 2 B 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 B 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 B 4 THR A 228 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 C 4 LYS A 186 ALA A 193 0 SHEET 2 C 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 C 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 C 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 D 4 GLU A 222 GLN A 224 0 SHEET 2 D 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 D 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 D 4 LEU A 270 ARG A 273 -1 O LEU A 272 N CYS A 259 SHEET 1 E 4 LYS B 5 SER B 10 0 SHEET 2 E 4 ASN B 20 PHE B 29 -1 O SER B 27 N LYS B 5 SHEET 3 E 4 PHE B 61 PHE B 69 -1 O THR B 67 N LEU B 22 SHEET 4 E 4 GLU B 49 HIS B 50 -1 N GLU B 49 O TYR B 66 SHEET 1 F 4 LYS B 5 SER B 10 0 SHEET 2 F 4 ASN B 20 PHE B 29 -1 O SER B 27 N LYS B 5 SHEET 3 F 4 PHE B 61 PHE B 69 -1 O THR B 67 N LEU B 22 SHEET 4 F 4 SER B 54 PHE B 55 -1 N SER B 54 O TYR B 62 SHEET 1 G 4 GLU B 43 ARG B 44 0 SHEET 2 G 4 GLU B 35 LYS B 40 -1 N LYS B 40 O GLU B 43 SHEET 3 G 4 TYR B 77 ASN B 82 -1 O ALA B 78 N LEU B 39 SHEET 4 G 4 LYS B 90 LYS B 93 -1 O LYS B 90 N VAL B 81 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.06 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.06 SSBOND 3 CYS B 24 CYS B 79 1555 1555 2.03 LINK C GLY C 4 N ASEP C 5 1555 1555 1.33 LINK C GLY C 4 N BSEP C 5 1555 1555 1.33 LINK C ASEP C 5 N PRO C 6 1555 1555 1.34 LINK C BSEP C 5 N PRO C 6 1555 1555 1.35 LINK N GLY A 1 CD CD A 281 1555 1555 2.53 LINK NE2 HIS A 3 CD CD A 281 1555 1555 2.28 LINK OE1 GLU A 19 MG MG A 284 1555 1555 2.50 LINK OE2 GLU A 19 MG MG A 284 1555 1555 2.41 LINK OD1 ASP A 30 CD CD A 282 1555 1555 2.43 LINK OD2 ASP A 30 CD CD A 282 1555 1555 2.51 LINK NE2 HIS A 145 CD B CD A 279 1555 1555 2.29 LINK ND1 HIS A 151 CD CD A 280 1555 1555 2.59 LINK OE1 GLU A 154 CD CD A 280 1555 1555 2.42 LINK OE2 GLU A 154 CD CD A 280 1555 1555 2.42 LINK OE2 GLU A 154 CD CD A 283 1555 1555 2.30 LINK OE1 GLU A 212 CD CD A 282 1555 1555 2.26 LINK OE2 GLU A 212 CD CD A 282 1555 1555 2.32 LINK CD A CD A 279 O HOH A 361 1555 1555 2.41 LINK CD A CD A 279 O HOH A 398 1555 1555 2.28 LINK CD CD A 281 O HOH A 339 1555 1555 2.40 LINK CD CD A 281 O HOH A 353 1555 1555 2.21 LINK CD CD A 282 O HOH A 480 1555 1555 2.42 LINK CD CD A 282 O HOH A 532 1555 1555 2.52 LINK CD CD A 282 O HOH A 556 1555 1555 2.58 LINK O HOH A 461 CD CD B 100 1555 1555 2.39 LINK NE2 HIS B 50 CD CD B 100 1555 1555 2.26 LINK CD CD B 100 O HOH B 375 1555 1555 2.52 CISPEP 1 TYR A 209 PRO A 210 0 4.45 CISPEP 2 HIS B 30 PRO B 31 0 2.27 SITE 1 AC1 5 GLU A 58 TYR A 59 GLY A 62 GLU A 63 SITE 2 AC1 5 LYS A 66 SITE 1 AC2 6 ARG A 6 ASP A 29 ASP A 30 HOH A 400 SITE 2 AC2 6 HOH A 402 HOH A 509 SITE 1 AC3 3 GLU A 166 TRP A 167 ARG A 170 SITE 1 AC4 7 HIS A 145 HIS A 197 GLU A 198 HOH A 361 SITE 2 AC4 7 HOH A 377 HOH A 398 HOH A 425 SITE 1 AC5 5 HIS A 151 GLU A 154 HIS A 191 CD A 283 SITE 2 AC5 5 HOH A 363 SITE 1 AC6 4 GLY A 1 HIS A 3 HOH A 339 HOH A 353 SITE 1 AC7 5 ASP A 30 GLU A 212 HOH A 480 HOH A 532 SITE 2 AC7 5 HOH A 556 SITE 1 AC8 5 HIS A 151 GLU A 154 CD A 280 HOH A 354 SITE 2 AC8 5 HOH A 546 SITE 1 AC9 5 GLU A 19 GLN A 72 HOH A 572 HIS B 12 SITE 2 AC9 5 PRO B 13 SITE 1 BC1 6 ILE A 23 SER B 32 ASP B 33 HOH B 117 SITE 2 BC1 6 HOH B 164 HOH B 319 SITE 1 BC2 5 HOH A 461 HIS B 50 HOH B 374 HOH B 375 SITE 2 BC2 5 HOH B 376 CRYST1 59.911 80.043 110.367 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016691 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009061 0.00000