PDB Short entry for 3FYA HEADER TRANSCRIPTION REGULATOR 22-JAN-09 3FYA TITLE CRYSTAL STRUCTURE OF AN R35A MUTANT OF THE RESTRICTION-MODIFICATION TITLE 2 CONTROLLER PROTEIN C.ESP1396I COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTER SP.; SOURCE 3 ORGANISM_TAXID: 211595; SOURCE 4 STRAIN: RFL1396; SOURCE 5 GENE: ESP1396IC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS TRANSCRIPTIONAL REGULATOR, HELIX-TURN-HELIX, RESTRICTION- KEYWDS 2 MODIFICATION, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR N.J.BALL,J.E.MCGEEHAN,S.J.THRESH,S.D.STREETER,G.G.KNEALE REVDAT 5 06-SEP-23 3FYA 1 REMARK REVDAT 4 20-OCT-21 3FYA 1 SEQADV REVDAT 3 28-MAR-12 3FYA 1 JRNL REVDAT 2 13-JUL-11 3FYA 1 VERSN REVDAT 1 25-AUG-09 3FYA 0 JRNL AUTH N.BALL,S.D.STREETER,G.G.KNEALE,J.E.MCGEEHAN JRNL TITL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN JRNL TITL 2 C.ESP1396I. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 65 900 2009 JRNL REFN ISSN 0907-4449 JRNL PMID 19690367 JRNL DOI 10.1107/S0907444909020514 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.E.MCGEEHAN,S.D.STREETER,S.THRESH,N.BALL,R.B.RAVELLI, REMARK 1 AUTH 2 G.G.KNEALE REMARK 1 TITL STRUCTURAL ANALYSIS OF THE GENETIC SWITCH THAT REGULATES THE REMARK 1 TITL 2 EXPRESSION OF RESTRICTION-MODIFICATION GENES REMARK 1 REF NUCLEIC ACIDS RES. V. 36 4778 2008 REMARK 1 REFN ISSN 0305-1048 REMARK 1 PMID 18644840 REMARK 1 DOI 10.1093/NAR/GKN448 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 3615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 164 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 239 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 17 REMARK 3 BIN FREE R VALUE : 0.2380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1208 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 86.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.42000 REMARK 3 B22 (A**2) : 0.42000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.21000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.478 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.406 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 50.745 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1207 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1614 ; 1.690 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 150 ; 5.971 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;27.249 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 256 ;24.613 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;23.701 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 199 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 824 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 643 ; 0.261 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 840 ; 0.326 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 39 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.409 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.350 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 781 ; 0.401 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1213 ; 0.623 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 478 ; 0.803 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 401 ; 1.264 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 36 1 REMARK 3 1 B 3 B 36 1 REMARK 3 2 A 38 A 43 1 REMARK 3 2 B 38 B 43 1 REMARK 3 3 A 47 A 75 1 REMARK 3 3 B 47 B 75 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 524 ; 0.080 ; 0.050 REMARK 3 TIGHT THERMAL 1 A (A**2): 524 ; 0.090 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): 11.8108 4.5072 6.9148 REMARK 3 T TENSOR REMARK 3 T11: -0.3289 T22: 0.2140 REMARK 3 T33: -0.1637 T12: 0.0324 REMARK 3 T13: -0.0144 T23: 0.0742 REMARK 3 L TENSOR REMARK 3 L11: 12.3308 L22: 6.6956 REMARK 3 L33: 15.8733 L12: 0.1278 REMARK 3 L13: 5.9300 L23: -4.3753 REMARK 3 S TENSOR REMARK 3 S11: -0.5287 S12: -0.3370 S13: 0.2507 REMARK 3 S21: 0.6800 S22: 0.0457 S23: 0.1607 REMARK 3 S31: -1.0882 S32: 0.1207 S33: 0.4830 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 79 REMARK 3 ORIGIN FOR THE GROUP (A): 29.9081 5.9774 -2.2473 REMARK 3 T TENSOR REMARK 3 T11: -0.0936 T22: 0.4162 REMARK 3 T33: 0.2487 T12: -0.1471 REMARK 3 T13: -0.0450 T23: 0.1537 REMARK 3 L TENSOR REMARK 3 L11: 9.5146 L22: 2.0107 REMARK 3 L33: 4.5993 L12: -3.0602 REMARK 3 L13: 0.3386 L23: -0.3308 REMARK 3 S TENSOR REMARK 3 S11: -0.1236 S12: -0.0358 S13: -0.1526 REMARK 3 S21: -0.5419 S22: -0.3265 S23: -0.2928 REMARK 3 S31: -0.2744 S32: 0.1971 S33: 0.4502 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051189. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9330 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3839 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.952 REMARK 200 RESOLUTION RANGE LOW (A) : 41.959 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.26300 REMARK 200 R SYM (I) : 0.26300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 1.3940 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41200 REMARK 200 R SYM FOR SHELL (I) : 0.41200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3CLC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM NACL, 40 MM TRIS-HCL, 5 % W/V REMARK 280 GLYCEROL, 2.5 MM CACL2, PH 8.0, PRECIPITATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.52000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.26000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 67.89000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 22.63000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 113.15000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 77 REMARK 465 HIS A 78 REMARK 465 ASP A 79 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 ASN A 32 CG OD1 ND2 REMARK 470 TYR B 37 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 6 -55.37 -29.47 REMARK 500 LEU B 6 -52.95 -29.89 REMARK 500 ARG B 43 -72.91 -122.04 REMARK 500 SER B 45 56.12 34.64 REMARK 500 ASN B 47 90.45 -61.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CLC RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN COMPLEXED WITH 35MER DNA DBREF 3FYA A 1 79 UNP Q8GGH0 Q8GGH0_9ENTR 1 79 DBREF 3FYA B 1 79 UNP Q8GGH0 Q8GGH0_9ENTR 1 79 SEQADV 3FYA MET A -19 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA GLY A -18 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER A -17 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER A -16 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A -15 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A -14 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A -13 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A -12 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A -11 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A -10 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER A -9 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER A -8 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA GLY A -7 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA LEU A -6 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA VAL A -5 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA PRO A -4 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA ARG A -3 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA GLY A -2 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER A -1 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS A 0 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA ALA A 35 UNP Q8GGH0 ARG 35 ENGINEERED MUTATION SEQADV 3FYA MET B -19 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA GLY B -18 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER B -17 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER B -16 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B -15 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B -14 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B -13 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B -12 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B -11 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B -10 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER B -9 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER B -8 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA GLY B -7 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA LEU B -6 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA VAL B -5 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA PRO B -4 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA ARG B -3 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA GLY B -2 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA SER B -1 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA HIS B 0 UNP Q8GGH0 EXPRESSION TAG SEQADV 3FYA ALA B 35 UNP Q8GGH0 ARG 35 ENGINEERED MUTATION SEQRES 1 A 99 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 99 LEU VAL PRO ARG GLY SER HIS MET GLU SER PHE LEU LEU SEQRES 3 A 99 SER LYS VAL SER PHE VAL ILE LYS LYS ILE ARG LEU GLU SEQRES 4 A 99 LYS GLY MET THR GLN GLU ASP LEU ALA TYR LYS SER ASN SEQRES 5 A 99 LEU ASP ALA THR TYR ILE SER GLY ILE GLU ARG ASN SER SEQRES 6 A 99 ARG ASN LEU THR ILE LYS SER LEU GLU LEU ILE MET LYS SEQRES 7 A 99 GLY LEU GLU VAL SER ASP VAL VAL PHE PHE GLU MET LEU SEQRES 8 A 99 ILE LYS GLU ILE LEU LYS HIS ASP SEQRES 1 B 99 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 99 LEU VAL PRO ARG GLY SER HIS MET GLU SER PHE LEU LEU SEQRES 3 B 99 SER LYS VAL SER PHE VAL ILE LYS LYS ILE ARG LEU GLU SEQRES 4 B 99 LYS GLY MET THR GLN GLU ASP LEU ALA TYR LYS SER ASN SEQRES 5 B 99 LEU ASP ALA THR TYR ILE SER GLY ILE GLU ARG ASN SER SEQRES 6 B 99 ARG ASN LEU THR ILE LYS SER LEU GLU LEU ILE MET LYS SEQRES 7 B 99 GLY LEU GLU VAL SER ASP VAL VAL PHE PHE GLU MET LEU SEQRES 8 B 99 ILE LYS GLU ILE LEU LYS HIS ASP HELIX 1 1 SER A 3 LYS A 20 1 18 HELIX 2 2 THR A 23 SER A 31 1 9 HELIX 3 3 ASP A 34 ARG A 43 1 10 HELIX 4 4 THR A 49 GLU A 61 1 13 HELIX 5 5 SER A 63 LEU A 76 1 14 HELIX 6 6 SER B 3 LYS B 20 1 18 HELIX 7 7 THR B 23 SER B 31 1 9 HELIX 8 8 ASP B 34 ARG B 43 1 10 HELIX 9 9 THR B 49 LEU B 60 1 12 HELIX 10 10 SER B 63 LYS B 77 1 15 CRYST1 48.435 48.435 135.780 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020646 0.011920 0.000000 0.00000 SCALE2 0.000000 0.023840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007365 0.00000