PDB Short entry for 3G12 HEADER LYASE 29-JAN-09 3G12 TITLE CRYSTAL STRUCTURE OF A PUTATIVE LACTOYLGLUTATHIONE LYASE FROM TITLE 2 BDELLOVIBRIO BACTERIOVORUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE LACTOYLGLUTATHIONE LYASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BDELLOVIBRIO BACTERIOVORUS HD100; SOURCE 3 ORGANISM_TAXID: 264462; SOURCE 4 STRAIN: HD100 / DSM 50701 / NCIB 9529; SOURCE 5 ATCC: 15356; SOURCE 6 GENE: BD2520; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-CODON+RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS LYASE, GLYOXALASE, BLEOMYCIN RESISTANCE, PSI-2, NYSGXRC, STRUCTURAL KEYWDS 2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER KEYWDS 3 FOR STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,M.MADEGOWDA,M.GILMORE,S.CHANG,M.MALETIC,D.SMITH, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.SWAMINATHAN,S.C.ALMO,NEW YORK SGX RESEARCH AUTHOR 3 CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 21-FEB-24 3G12 1 REMARK REVDAT 4 10-FEB-21 3G12 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 21-NOV-18 3G12 1 AUTHOR REVDAT 2 01-NOV-17 3G12 1 REMARK REVDAT 1 10-FEB-09 3G12 0 JRNL AUTH Y.PATSKOVSKY,M.MADEGOWDA,M.GILMORE,S.CHANG,M.MALETIC, JRNL AUTH 2 D.SMITH,J.M.SAUDER,S.K.BURLEY,S.SWAMINATHAN,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE LACTOYLGLUTATHIONE LYASE JRNL TITL 2 FROM BDELLOVIBRIO BACTERIOVORUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.900 REMARK 3 FREE R VALUE TEST SET COUNT : 231 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 546 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.3930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1726 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.59000 REMARK 3 B22 (A**2) : 0.59000 REMARK 3 B33 (A**2) : -1.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.862 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.341 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.257 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.252 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1775 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2404 ; 1.219 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 223 ; 6.061 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 73 ;36.451 ;25.342 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 320 ;16.975 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.905 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 287 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1288 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 634 ; 0.140 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1177 ; 0.294 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 110 ; 0.125 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.091 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.232 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1148 ; 2.450 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1816 ; 4.328 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 683 ; 5.504 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 585 ; 8.419 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 117 1 REMARK 3 1 B 1 B 117 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 837 ; 0.05 ; 0.10 REMARK 3 TIGHT THERMAL 1 A (A**2): 837 ; 0.23 ; 1.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G12 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051288. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 90.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8394 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BIS-TRIS PH 6.5, 2M AMMONIUM REMARK 280 SULFATE, 10% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.85550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.63800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.63800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.28325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.63800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.63800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 14.42775 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.63800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.63800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.28325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.63800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.63800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 14.42775 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 28.85550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 LYS A 33 REMARK 465 VAL A 34 REMARK 465 ASP A 35 REMARK 465 LYS A 36 REMARK 465 GLY A 37 REMARK 465 ASP A 99 REMARK 465 LEU A 118 REMARK 465 GLU A 119 REMARK 465 GLY A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ASP B 35 REMARK 465 LYS B 36 REMARK 465 GLY B 37 REMARK 465 ASP B 99 REMARK 465 GLU B 119 REMARK 465 GLY B 120 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 465 HIS B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 59 -7.08 66.31 REMARK 500 GLN B 59 -11.24 68.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11004T RELATED DB: TARGETDB DBREF 3G12 A 2 118 UNP Q6MK89 Q6MK89_BDEBA 2 118 DBREF 3G12 B 2 118 UNP Q6MK89 Q6MK89_BDEBA 2 118 SEQADV 3G12 MET A -1 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 SER A 0 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 LEU A 1 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 GLU A 119 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 GLY A 120 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS A 121 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS A 122 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS A 123 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS A 124 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS A 125 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS A 126 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 MET B -1 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 SER B 0 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 LEU B 1 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 GLU B 119 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 GLY B 120 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS B 121 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS B 122 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS B 123 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS B 124 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS B 125 UNP Q6MK89 EXPRESSION TAG SEQADV 3G12 HIS B 126 UNP Q6MK89 EXPRESSION TAG SEQRES 1 A 128 MET SER LEU SER LEU LEU ILE THR SER ILE THR ILE ASN SEQRES 2 A 128 THR SER HIS LEU GLN GLY MET LEU GLY PHE TYR ARG ILE SEQRES 3 A 128 ILE GLY PHE GLN PHE THR ALA SER LYS VAL ASP LYS GLY SEQRES 4 A 128 SER GLU VAL HIS ARG ALA VAL HIS ASN GLY VAL GLU PHE SEQRES 5 A 128 SER LEU TYR SER ILE GLN ASN PRO GLN ARG SER GLN ILE SEQRES 6 A 128 PRO SER LEU GLN LEU GLY PHE GLN ILE THR ASP LEU GLU SEQRES 7 A 128 LYS THR VAL GLN GLU LEU VAL LYS ILE PRO GLY ALA MET SEQRES 8 A 128 CYS ILE LEU ASP PRO THR ASP MET PRO ASP GLY LYS LYS SEQRES 9 A 128 ALA ILE VAL LEU ASP PRO ASP GLY HIS SER ILE GLU LEU SEQRES 10 A 128 CYS GLU LEU GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 128 MET SER LEU SER LEU LEU ILE THR SER ILE THR ILE ASN SEQRES 2 B 128 THR SER HIS LEU GLN GLY MET LEU GLY PHE TYR ARG ILE SEQRES 3 B 128 ILE GLY PHE GLN PHE THR ALA SER LYS VAL ASP LYS GLY SEQRES 4 B 128 SER GLU VAL HIS ARG ALA VAL HIS ASN GLY VAL GLU PHE SEQRES 5 B 128 SER LEU TYR SER ILE GLN ASN PRO GLN ARG SER GLN ILE SEQRES 6 B 128 PRO SER LEU GLN LEU GLY PHE GLN ILE THR ASP LEU GLU SEQRES 7 B 128 LYS THR VAL GLN GLU LEU VAL LYS ILE PRO GLY ALA MET SEQRES 8 B 128 CYS ILE LEU ASP PRO THR ASP MET PRO ASP GLY LYS LYS SEQRES 9 B 128 ALA ILE VAL LEU ASP PRO ASP GLY HIS SER ILE GLU LEU SEQRES 10 B 128 CYS GLU LEU GLU GLY HIS HIS HIS HIS HIS HIS HET SO4 A 201 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *30(H2 O) HELIX 1 1 HIS A 14 GLY A 26 1 13 HELIX 2 2 ASP A 74 VAL A 83 1 10 HELIX 3 3 HIS B 14 GLY B 26 1 13 HELIX 4 4 ASP B 74 VAL B 83 1 10 SHEET 1 A 8 THR A 30 ALA A 31 0 SHEET 2 A 8 VAL A 40 HIS A 45 -1 O ARG A 42 N THR A 30 SHEET 3 A 8 VAL A 48 SER A 54 -1 O PHE A 50 N ALA A 43 SHEET 4 A 8 LEU A 3 THR A 12 1 N THR A 12 O TYR A 53 SHEET 5 A 8 LEU B 66 ILE B 72 -1 O GLN B 67 N THR A 9 SHEET 6 A 8 SER B 112 GLU B 117 1 O CYS B 116 N ILE B 72 SHEET 7 A 8 LYS B 101 LEU B 106 -1 N VAL B 105 O ILE B 113 SHEET 8 A 8 MET B 89 ASP B 96 -1 N THR B 95 O LYS B 102 SHEET 1 B 8 MET A 89 ASP A 96 0 SHEET 2 B 8 LYS A 101 LEU A 106 -1 O LEU A 106 N MET A 89 SHEET 3 B 8 SER A 112 GLU A 117 -1 O LEU A 115 N ALA A 103 SHEET 4 B 8 LEU A 66 ILE A 72 1 N LEU A 68 O GLU A 114 SHEET 5 B 8 LEU B 3 THR B 12 -1 O THR B 9 N GLN A 67 SHEET 6 B 8 VAL B 48 SER B 54 1 O TYR B 53 N THR B 12 SHEET 7 B 8 VAL B 40 HIS B 45 -1 N ALA B 43 O PHE B 50 SHEET 8 B 8 THR B 30 ALA B 31 -1 N THR B 30 O ARG B 42 SITE 1 AC1 7 PRO A 64 SER A 65 LEU A 66 HIS A 111 SITE 2 AC1 7 PRO B 64 SER B 65 LEU B 66 CRYST1 91.276 91.276 57.711 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010956 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010956 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017328 0.00000