PDB Short entry for 3G2W HEADER PROTEIN TRANSPORT 01-FEB-09 3G2W TITLE VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH A DXXLL HINGE PEPTIDE CAVEAT 3G2W THE CHIRALITY ERROR AT CA CENTER OF LEU C 6. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR-BINDING PROTEIN GGA1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: VHS DOMAIN (N-TERMINAL DOMAIN); COMPND 5 SYNONYM: GOLGI-LOCALIZED, GAMMA EAR-CONTAINING, ARF-BINDING PROTEIN COMPND 6 1, GAMMA-ADAPTIN-RELATED PROTEIN 1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTERNAL PEPTIDE OF THE HINGE DOMAIN OF ADP-RIBOSYLATION COMPND 10 FACTOR-BINDING PROTEIN GGA1; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CODONPLUS-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. KEYWDS ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA1, VHS, ACIDIC-CLUSTER KEYWDS 2 DILEUCINE SIGNAL, HINGE DOMAIN, AUTOINHIBITION, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.F.CRAMER,M.A.BEHRENS,C.GUSTAFSEN,C.L.P.OLIVEIRA,J.S.PEDERSEN, AUTHOR 2 P.MADSEN,C.M.PETERSEN,S.S.THIRUP REVDAT 3 01-NOV-23 3G2W 1 SEQADV REVDAT 2 05-FEB-14 3G2W 1 JRNL VERSN REVDAT 1 15-DEC-09 3G2W 0 JRNL AUTH J.F.CRAMER,C.GUSTAFSEN,M.A.BEHRENS,C.L.P.OLIVEIRA, JRNL AUTH 2 J.S.PEDERSEN,P.MADSEN,C.M.PETERSEN,S.S.THIRUP JRNL TITL GGA AUTOINHIBITION REVISITED JRNL REF TRAFFIC V. 11 259 2010 JRNL REFN ISSN 1398-9219 JRNL PMID 20015111 JRNL DOI 10.1111/J.1600-0854.2009.01017.X REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 14701 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.2930 - 4.1030 1.00 2922 154 0.2020 0.2340 REMARK 3 2 4.1030 - 3.2570 1.00 2802 148 0.2010 0.2330 REMARK 3 3 3.2570 - 2.8450 1.00 2755 145 0.2350 0.3000 REMARK 3 4 2.8450 - 2.5850 1.00 2766 145 0.2420 0.3330 REMARK 3 5 2.5850 - 2.4000 1.00 2720 144 0.2460 0.3030 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 49.35 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.20900 REMARK 3 B22 (A**2) : -19.03200 REMARK 3 B33 (A**2) : -10.07700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2405 REMARK 3 ANGLE : 1.431 3238 REMARK 3 CHIRALITY : 0.124 367 REMARK 3 PLANARITY : 0.013 410 REMARK 3 DIHEDRAL : 24.074 915 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 8.0665 -8.8765 -4.2192 REMARK 3 T TENSOR REMARK 3 T11: 0.1891 T22: 0.3967 REMARK 3 T33: 0.2154 T12: -0.0129 REMARK 3 T13: -0.0503 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 4.3155 L22: 3.7497 REMARK 3 L33: 7.1261 L12: 0.8342 REMARK 3 L13: -1.6920 L23: -1.1961 REMARK 3 S TENSOR REMARK 3 S11: 0.2224 S12: -0.1435 S13: -0.0346 REMARK 3 S21: -0.0499 S22: -0.3911 S23: 0.0232 REMARK 3 S31: -0.4507 S32: 0.1304 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 6.9852 -1.2851 -28.7715 REMARK 3 T TENSOR REMARK 3 T11: 0.3713 T22: 0.3724 REMARK 3 T33: 0.4411 T12: -0.0361 REMARK 3 T13: 0.0838 T23: 0.1369 REMARK 3 L TENSOR REMARK 3 L11: 3.5633 L22: 3.6516 REMARK 3 L33: 6.5053 L12: 0.4629 REMARK 3 L13: 0.4900 L23: -1.0095 REMARK 3 S TENSOR REMARK 3 S11: -0.3134 S12: 0.3489 S13: -0.1945 REMARK 3 S21: -0.3255 S22: 0.2677 S23: 0.3494 REMARK 3 S31: -0.0478 S32: 0.0582 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -6.6502 -14.9106 -8.9647 REMARK 3 T TENSOR REMARK 3 T11: 0.4645 T22: 1.0217 REMARK 3 T33: 0.4924 T12: -0.0483 REMARK 3 T13: -0.0238 T23: -0.0989 REMARK 3 L TENSOR REMARK 3 L11: 0.2700 L22: 0.3820 REMARK 3 L33: 0.4660 L12: 0.5595 REMARK 3 L13: -0.0207 L23: -0.5965 REMARK 3 S TENSOR REMARK 3 S11: 0.0709 S12: 0.3354 S13: 0.8252 REMARK 3 S21: -0.1658 S22: 0.4425 S23: -0.0896 REMARK 3 S31: -1.0547 S32: -0.0479 S33: 0.0433 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 2.0064 -17.4000 -30.0789 REMARK 3 T TENSOR REMARK 3 T11: 0.8286 T22: 1.0574 REMARK 3 T33: 1.1291 T12: -0.1346 REMARK 3 T13: 0.1033 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 0.0298 L22: -0.0236 REMARK 3 L33: 0.0222 L12: 0.0069 REMARK 3 L13: 0.0390 L23: -0.0048 REMARK 3 S TENSOR REMARK 3 S11: 0.2322 S12: -0.5841 S13: -0.2021 REMARK 3 S21: 0.2111 S22: 0.4171 S23: -0.6169 REMARK 3 S31: 0.4733 S32: -0.5827 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051354. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.044 REMARK 200 MONOCHROMATOR : SLS X06 MONO REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14702 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.09 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.55 REMARK 200 R MERGE FOR SHELL (I) : 0.54400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JWF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%(W/V) PEG 5000 MME, 0.2M NH4I, 0.3M REMARK 280 1,6-HEXANEDIOL, 0.1M MES-NAOH, PH 6.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.90000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.90000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 ALA A 4 REMARK 465 MET A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 146 REMARK 465 SER A 147 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 PRO B 3 REMARK 465 ALA B 4 REMARK 465 MET B 5 REMARK 465 GLU B 6 REMARK 465 PRO B 7 REMARK 465 LYS B 146 REMARK 465 SER B 147 REMARK 465 SER C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 VAL C 4 REMARK 465 SEP C 5 REMARK 465 SER D 1 REMARK 465 ALA D 2 REMARK 465 SER D 3 REMARK 465 VAL D 4 REMARK 465 SEP D 5 REMARK 465 LEU D 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 141 CE LYS A 141 NZ 0.193 REMARK 500 LEU C 14 C LEU C 14 OXT 0.160 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 102 -117.94 -92.77 REMARK 500 LEU A 126 74.65 -119.58 REMARK 500 GLU A 129 72.13 -64.87 REMARK 500 CYS B 77 84.91 -152.99 REMARK 500 ARG B 89 -61.23 -12.31 REMARK 500 TYR B 102 -106.50 -98.93 REMARK 500 LEU C 7 -84.05 -104.74 REMARK 500 ASP C 8 -160.18 -125.46 REMARK 500 MET C 12 153.25 -44.45 REMARK 500 LEU D 7 85.93 30.26 REMARK 500 ASP D 9 -173.32 -60.65 REMARK 500 MET D 12 175.76 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS B 77 GLY B 78 -36.72 REMARK 500 MET C 12 SER C 13 147.77 REMARK 500 LEU D 6 LEU D 7 42.44 REMARK 500 GLU D 10 LEU D 11 146.28 REMARK 500 LEU D 11 MET D 12 88.10 REMARK 500 MET D 12 SER D 13 -77.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3G2S RELATED DB: PDB REMARK 900 RELATED ID: 3G2T RELATED DB: PDB REMARK 900 RELATED ID: 3G2U RELATED DB: PDB REMARK 900 RELATED ID: 3G2V RELATED DB: PDB DBREF 3G2W A 1 147 UNP Q9UJY5 GGA1_HUMAN 1 147 DBREF 3G2W B 1 147 UNP Q9UJY5 GGA1_HUMAN 1 147 DBREF 3G2W C 1 14 UNP Q9UJY5 GGA1_HUMAN 351 364 DBREF 3G2W D 1 14 UNP Q9UJY5 GGA1_HUMAN 351 364 SEQADV 3G2W GLY A -1 UNP Q9UJY5 EXPRESSION TAG SEQADV 3G2W SER A 0 UNP Q9UJY5 EXPRESSION TAG SEQADV 3G2W GLY B -1 UNP Q9UJY5 EXPRESSION TAG SEQADV 3G2W SER B 0 UNP Q9UJY5 EXPRESSION TAG SEQRES 1 A 149 GLY SER MET GLU PRO ALA MET GLU PRO GLU THR LEU GLU SEQRES 2 A 149 ALA ARG ILE ASN ARG ALA THR ASN PRO LEU ASN LYS GLU SEQRES 3 A 149 LEU ASP TRP ALA SER ILE ASN GLY PHE CYS GLU GLN LEU SEQRES 4 A 149 ASN GLU ASP PHE GLU GLY PRO PRO LEU ALA THR ARG LEU SEQRES 5 A 149 LEU ALA HIS LYS ILE GLN SER PRO GLN GLU TRP GLU ALA SEQRES 6 A 149 ILE GLN ALA LEU THR VAL LEU GLU THR CYS MET LYS SER SEQRES 7 A 149 CYS GLY LYS ARG PHE HIS ASP GLU VAL GLY LYS PHE ARG SEQRES 8 A 149 PHE LEU ASN GLU LEU ILE LYS VAL VAL SER PRO LYS TYR SEQRES 9 A 149 LEU GLY SER ARG THR SER GLU LYS VAL LYS ASN LYS ILE SEQRES 10 A 149 LEU GLU LEU LEU TYR SER TRP THR VAL GLY LEU PRO GLU SEQRES 11 A 149 GLU VAL LYS ILE ALA GLU ALA TYR GLN MET LEU LYS LYS SEQRES 12 A 149 GLN GLY ILE VAL LYS SER SEQRES 1 B 149 GLY SER MET GLU PRO ALA MET GLU PRO GLU THR LEU GLU SEQRES 2 B 149 ALA ARG ILE ASN ARG ALA THR ASN PRO LEU ASN LYS GLU SEQRES 3 B 149 LEU ASP TRP ALA SER ILE ASN GLY PHE CYS GLU GLN LEU SEQRES 4 B 149 ASN GLU ASP PHE GLU GLY PRO PRO LEU ALA THR ARG LEU SEQRES 5 B 149 LEU ALA HIS LYS ILE GLN SER PRO GLN GLU TRP GLU ALA SEQRES 6 B 149 ILE GLN ALA LEU THR VAL LEU GLU THR CYS MET LYS SER SEQRES 7 B 149 CYS GLY LYS ARG PHE HIS ASP GLU VAL GLY LYS PHE ARG SEQRES 8 B 149 PHE LEU ASN GLU LEU ILE LYS VAL VAL SER PRO LYS TYR SEQRES 9 B 149 LEU GLY SER ARG THR SER GLU LYS VAL LYS ASN LYS ILE SEQRES 10 B 149 LEU GLU LEU LEU TYR SER TRP THR VAL GLY LEU PRO GLU SEQRES 11 B 149 GLU VAL LYS ILE ALA GLU ALA TYR GLN MET LEU LYS LYS SEQRES 12 B 149 GLN GLY ILE VAL LYS SER SEQRES 1 C 14 SER ALA SER VAL SEP LEU LEU ASP ASP GLU LEU MET SER SEQRES 2 C 14 LEU SEQRES 1 D 14 SER ALA SER VAL SEP LEU LEU ASP ASP GLU LEU MET SER SEQRES 2 D 14 LEU FORMUL 5 HOH *31(H2 O) HELIX 1 1 THR A 9 THR A 18 1 10 HELIX 2 2 ASP A 26 ASP A 40 1 15 HELIX 3 3 GLU A 42 GLN A 56 1 15 HELIX 4 4 GLN A 59 CYS A 77 1 19 HELIX 5 5 GLY A 78 GLY A 86 1 9 HELIX 6 6 LYS A 87 SER A 99 1 13 HELIX 7 7 TYR A 102 THR A 107 5 6 HELIX 8 8 SER A 108 LEU A 126 1 19 HELIX 9 9 GLU A 129 GLY A 143 1 15 HELIX 10 10 THR B 9 THR B 18 1 10 HELIX 11 11 ASP B 26 ASN B 38 1 13 HELIX 12 12 GLU B 42 GLN B 56 1 15 HELIX 13 13 GLN B 59 LYS B 75 1 17 HELIX 14 14 GLY B 78 GLY B 86 1 9 HELIX 15 15 LYS B 87 SER B 99 1 13 HELIX 16 16 SER B 108 LEU B 126 1 19 HELIX 17 17 GLU B 129 LYS B 141 1 13 SSBOND 1 CYS A 34 CYS A 73 1555 1555 2.05 SSBOND 2 CYS A 77 CYS B 77 1555 2555 2.47 SSBOND 3 CYS B 34 CYS B 73 1555 1555 2.07 CISPEP 1 LEU C 7 ASP C 8 0 21.14 CRYST1 47.800 72.900 103.500 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020921 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009662 0.00000