PDB Short entry for 3G84 HEADER SUGAR BINDING PROTEIN 11-FEB-09 3G84 TITLE CRYSTAL STRUCTURE OF THE TRIMERIC NECK AND CARBOHYDRATE RECOGNITION TITLE 2 DOMAIN OF R343V MUTANT OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH TITLE 3 ALPHA 1,2 DIMANNOSE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN D; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 223-375; COMPND 5 SYNONYM: SP-D, PSP-D, LUNG SURFACTANT PROTEIN D; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: MAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFTPD, PSPD, SFTP4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA BLUE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A (+) KEYWDS SURFACTANT PROTEIN, CARBOHYDRATE RECOGNITION DOMAIN, TRIMERIC, KEYWDS 2 COLLAGEN, EXTRACELLULAR MATRIX, GASEOUS EXCHANGE, GLYCOPROTEIN, KEYWDS 3 HYDROXYLATION, LECTIN, SECRETED, SURFACE FILM, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.F.HEAD REVDAT 6 06-SEP-23 3G84 1 REMARK REVDAT 5 20-OCT-21 3G84 1 REMARK SEQADV HETSYN REVDAT 4 29-JUL-20 3G84 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 01-NOV-17 3G84 1 REMARK REVDAT 2 12-JAN-11 3G84 1 JRNL REVDAT 1 17-MAR-09 3G84 0 JRNL AUTH E.CROUCH,K.HARTSHORN,T.HORLACHER,B.MCDONALD,K.SMITH, JRNL AUTH 2 T.CAFARELLA,B.SEATON,P.H.SEEBERGER,J.HEAD JRNL TITL RECOGNITION OF MANNOSYLATED LIGANDS AND INFLUENZA A VIRUS BY JRNL TITL 2 HUMAN SURFACTANT PROTEIN D: CONTRIBUTIONS OF AN EXTENDED JRNL TITL 3 SITE AND RESIDUE 343. JRNL REF BIOCHEMISTRY V. 48 3335 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19249874 JRNL DOI 10.1021/BI8022703 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 28816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4350 - 5.5420 0.98 1964 106 0.1330 0.1590 REMARK 3 2 5.5420 - 4.3990 0.98 2012 102 0.1080 0.1440 REMARK 3 3 4.3990 - 3.8430 0.98 1979 101 0.0970 0.1250 REMARK 3 4 3.8430 - 3.4920 0.98 1960 106 0.1150 0.1640 REMARK 3 5 3.4920 - 3.2420 0.98 1985 105 0.1380 0.1670 REMARK 3 6 3.2420 - 3.0510 0.98 1981 100 0.1530 0.1730 REMARK 3 7 3.0510 - 2.8980 0.98 1974 104 0.1710 0.2440 REMARK 3 8 2.8980 - 2.7720 0.98 1927 96 0.1850 0.3030 REMARK 3 9 2.7720 - 2.6650 0.98 1996 102 0.2120 0.2630 REMARK 3 10 2.6650 - 2.5730 0.98 1962 105 0.2230 0.2680 REMARK 3 11 2.5730 - 2.4930 0.98 1954 100 0.2280 0.2050 REMARK 3 12 2.4930 - 2.4210 0.98 1860 121 0.2430 0.2810 REMARK 3 13 2.4210 - 2.3580 0.98 1960 97 0.2570 0.3000 REMARK 3 14 2.3580 - 2.3000 0.98 1874 83 0.2480 0.3070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 33.58 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.94200 REMARK 3 B22 (A**2) : 12.29700 REMARK 3 B33 (A**2) : -5.36200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.28300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4780 REMARK 3 OPERATOR: L,-K,H REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3594 REMARK 3 ANGLE : 0.868 4863 REMARK 3 CHIRALITY : 0.052 546 REMARK 3 PLANARITY : 0.004 639 REMARK 3 DIHEDRAL : 21.038 1314 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3G84 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051542. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : DOUBLE MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29073 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 90.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.6050 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.31900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1ORK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150MM NACL, 10MM CACL2, 12% PEG 8000, REMARK 280 100MM HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.03300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -129.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 196 REMARK 465 MET A 197 REMARK 465 ALA A 198 REMARK 465 ASP A 199 REMARK 465 ILE A 200 REMARK 465 GLY A 201 REMARK 465 SER A 202 REMARK 465 ASP A 203 REMARK 465 VAL A 204 REMARK 465 ALA B 196 REMARK 465 MET B 197 REMARK 465 ALA B 198 REMARK 465 ASP B 199 REMARK 465 ILE B 200 REMARK 465 GLY B 201 REMARK 465 SER B 202 REMARK 465 ASP B 203 REMARK 465 VAL B 204 REMARK 465 ALA C 196 REMARK 465 MET C 197 REMARK 465 ALA C 198 REMARK 465 ASP C 199 REMARK 465 ILE C 200 REMARK 465 GLY C 201 REMARK 465 SER C 202 REMARK 465 ASP C 203 REMARK 465 VAL C 204 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU C 256 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 299 -70.22 -82.72 REMARK 500 GLU A 301 109.54 -58.88 REMARK 500 ASN A 316 43.88 -145.16 REMARK 500 ASP A 325 150.87 -47.67 REMARK 500 SER A 328 107.89 -166.83 REMARK 500 VAL B 240 101.61 -168.18 REMARK 500 SER B 328 23.75 -147.39 REMARK 500 ASP C 297 43.34 -93.94 REMARK 500 ASP C 324 26.88 46.54 REMARK 500 ASP C 325 133.79 -30.71 REMARK 500 SER C 328 63.74 -152.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ORK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TRIMERIC NECK AND CARBOHYDRATE RECOGNITION REMARK 900 DOMAIN OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH INOSITOL-1- REMARK 900 PHOSPHATE REMARK 900 RELATED ID: 2OS9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TRIMERIC NECK AND CARBOHYDRATE RECOGNITION REMARK 900 DOMAIN OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH MYOINOSITOL REMARK 900 RELATED ID: 2ORJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TRIMERIC NECK AND CARBOHYDRATE RECOGNITION REMARK 900 DOMAIN OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH N-ACETYL REMARK 900 MANNOSAMINE REMARK 900 RELATED ID: 2GGX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TRIMER NECK AND CARBOHYDRATE RECOGNITION REMARK 900 DOMAIN OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH P-NITROPHENYL REMARK 900 MALTOSIDE REMARK 900 RELATED ID: 2GGU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TRIMERIC NECK AND CARBOHYDRATE RECOGNITION REMARK 900 DOMAIN OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH MALTOTRIOSE REMARK 900 RELATED ID: 2RIA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TRIMERIC NECK AND CARBOHYDRATE RECOGNITION REMARK 900 DOMAIN OF HUMAN SURFACTANT PROTEIN D IN COMPLEX WITH D-GLYCERO-D- REMARK 900 MANNO-HEPTOSE REMARK 900 RELATED ID: 3G81 RELATED DB: PDB REMARK 900 PULMONARY SURFACTANT-ASSOCIATED PROTEIN D IN COMPLEX WITH ALPHA REMARK 900 METHYL MANNOSIDE REMARK 900 RELATED ID: 3G83 RELATED DB: PDB REMARK 900 PULMONARY SURFACTANT-ASSOCIATED PROTEIN D IN COMPLEX WITH ALPHA 1,2 REMARK 900 DIMANNOSE DBREF 3G84 A 203 355 UNP P35247 SFTPD_HUMAN 223 375 DBREF 3G84 B 203 355 UNP P35247 SFTPD_HUMAN 223 375 DBREF 3G84 C 203 355 UNP P35247 SFTPD_HUMAN 223 375 SEQADV 3G84 ALA A 196 UNP P35247 EXPRESSION TAG SEQADV 3G84 MET A 197 UNP P35247 EXPRESSION TAG SEQADV 3G84 ALA A 198 UNP P35247 EXPRESSION TAG SEQADV 3G84 ASP A 199 UNP P35247 EXPRESSION TAG SEQADV 3G84 ILE A 200 UNP P35247 EXPRESSION TAG SEQADV 3G84 GLY A 201 UNP P35247 EXPRESSION TAG SEQADV 3G84 SER A 202 UNP P35247 EXPRESSION TAG SEQADV 3G84 VAL A 343 UNP P35247 ARG 363 ENGINEERED MUTATION SEQADV 3G84 ALA B 196 UNP P35247 EXPRESSION TAG SEQADV 3G84 MET B 197 UNP P35247 EXPRESSION TAG SEQADV 3G84 ALA B 198 UNP P35247 EXPRESSION TAG SEQADV 3G84 ASP B 199 UNP P35247 EXPRESSION TAG SEQADV 3G84 ILE B 200 UNP P35247 EXPRESSION TAG SEQADV 3G84 GLY B 201 UNP P35247 EXPRESSION TAG SEQADV 3G84 SER B 202 UNP P35247 EXPRESSION TAG SEQADV 3G84 VAL B 343 UNP P35247 ARG 363 ENGINEERED MUTATION SEQADV 3G84 ALA C 196 UNP P35247 EXPRESSION TAG SEQADV 3G84 MET C 197 UNP P35247 EXPRESSION TAG SEQADV 3G84 ALA C 198 UNP P35247 EXPRESSION TAG SEQADV 3G84 ASP C 199 UNP P35247 EXPRESSION TAG SEQADV 3G84 ILE C 200 UNP P35247 EXPRESSION TAG SEQADV 3G84 GLY C 201 UNP P35247 EXPRESSION TAG SEQADV 3G84 SER C 202 UNP P35247 EXPRESSION TAG SEQADV 3G84 VAL C 343 UNP P35247 ARG 363 ENGINEERED MUTATION SEQRES 1 A 160 ALA MET ALA ASP ILE GLY SER ASP VAL ALA SER LEU ARG SEQRES 2 A 160 GLN GLN VAL GLU ALA LEU GLN GLY GLN VAL GLN HIS LEU SEQRES 3 A 160 GLN ALA ALA PHE SER GLN TYR LYS LYS VAL GLU LEU PHE SEQRES 4 A 160 PRO ASN GLY GLN SER VAL GLY GLU LYS ILE PHE LYS THR SEQRES 5 A 160 ALA GLY PHE VAL LYS PRO PHE THR GLU ALA GLN LEU LEU SEQRES 6 A 160 CYS THR GLN ALA GLY GLY GLN LEU ALA SER PRO ARG SER SEQRES 7 A 160 ALA ALA GLU ASN ALA ALA LEU GLN GLN LEU VAL VAL ALA SEQRES 8 A 160 LYS ASN GLU ALA ALA PHE LEU SER MET THR ASP SER LYS SEQRES 9 A 160 THR GLU GLY LYS PHE THR TYR PRO THR GLY GLU SER LEU SEQRES 10 A 160 VAL TYR SER ASN TRP ALA PRO GLY GLU PRO ASN ASP ASP SEQRES 11 A 160 GLY GLY SER GLU ASP CYS VAL GLU ILE PHE THR ASN GLY SEQRES 12 A 160 LYS TRP ASN ASP VAL ALA CYS GLY GLU LYS ARG LEU VAL SEQRES 13 A 160 VAL CYS GLU PHE SEQRES 1 B 160 ALA MET ALA ASP ILE GLY SER ASP VAL ALA SER LEU ARG SEQRES 2 B 160 GLN GLN VAL GLU ALA LEU GLN GLY GLN VAL GLN HIS LEU SEQRES 3 B 160 GLN ALA ALA PHE SER GLN TYR LYS LYS VAL GLU LEU PHE SEQRES 4 B 160 PRO ASN GLY GLN SER VAL GLY GLU LYS ILE PHE LYS THR SEQRES 5 B 160 ALA GLY PHE VAL LYS PRO PHE THR GLU ALA GLN LEU LEU SEQRES 6 B 160 CYS THR GLN ALA GLY GLY GLN LEU ALA SER PRO ARG SER SEQRES 7 B 160 ALA ALA GLU ASN ALA ALA LEU GLN GLN LEU VAL VAL ALA SEQRES 8 B 160 LYS ASN GLU ALA ALA PHE LEU SER MET THR ASP SER LYS SEQRES 9 B 160 THR GLU GLY LYS PHE THR TYR PRO THR GLY GLU SER LEU SEQRES 10 B 160 VAL TYR SER ASN TRP ALA PRO GLY GLU PRO ASN ASP ASP SEQRES 11 B 160 GLY GLY SER GLU ASP CYS VAL GLU ILE PHE THR ASN GLY SEQRES 12 B 160 LYS TRP ASN ASP VAL ALA CYS GLY GLU LYS ARG LEU VAL SEQRES 13 B 160 VAL CYS GLU PHE SEQRES 1 C 160 ALA MET ALA ASP ILE GLY SER ASP VAL ALA SER LEU ARG SEQRES 2 C 160 GLN GLN VAL GLU ALA LEU GLN GLY GLN VAL GLN HIS LEU SEQRES 3 C 160 GLN ALA ALA PHE SER GLN TYR LYS LYS VAL GLU LEU PHE SEQRES 4 C 160 PRO ASN GLY GLN SER VAL GLY GLU LYS ILE PHE LYS THR SEQRES 5 C 160 ALA GLY PHE VAL LYS PRO PHE THR GLU ALA GLN LEU LEU SEQRES 6 C 160 CYS THR GLN ALA GLY GLY GLN LEU ALA SER PRO ARG SER SEQRES 7 C 160 ALA ALA GLU ASN ALA ALA LEU GLN GLN LEU VAL VAL ALA SEQRES 8 C 160 LYS ASN GLU ALA ALA PHE LEU SER MET THR ASP SER LYS SEQRES 9 C 160 THR GLU GLY LYS PHE THR TYR PRO THR GLY GLU SER LEU SEQRES 10 C 160 VAL TYR SER ASN TRP ALA PRO GLY GLU PRO ASN ASP ASP SEQRES 11 C 160 GLY GLY SER GLU ASP CYS VAL GLU ILE PHE THR ASN GLY SEQRES 12 C 160 LYS TRP ASN ASP VAL ALA CYS GLY GLU LYS ARG LEU VAL SEQRES 13 C 160 VAL CYS GLU PHE HET MAN D 1 12 HET MAN D 2 11 HET MAN E 1 12 HET MAN E 2 11 HET MAN F 1 12 HET MAN F 2 11 HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA B 401 1 HET CA B 402 1 HET CA B 403 1 HET CA C 401 1 HET CA C 402 1 HET CA C 403 1 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 MAN 6(C6 H12 O6) FORMUL 7 CA 9(CA 2+) FORMUL 16 HOH *129(H2 O) HELIX 1 1 LEU A 207 LEU A 233 1 27 HELIX 2 2 PRO A 253 ALA A 264 1 12 HELIX 3 3 SER A 273 ASN A 288 1 16 HELIX 4 4 ASP A 324 SER A 328 5 5 HELIX 5 5 ALA B 205 GLN B 209 5 5 HELIX 6 6 GLN B 210 PHE B 234 1 25 HELIX 7 7 PHE B 254 GLN B 263 1 10 HELIX 8 8 SER B 273 ASN B 288 1 16 HELIX 9 9 ASP B 324 SER B 328 5 5 HELIX 10 10 LEU C 207 PHE C 234 1 28 HELIX 11 11 PRO C 253 ALA C 264 1 12 HELIX 12 12 SER C 273 ASN C 288 1 16 HELIX 13 13 ASP C 324 SER C 328 5 5 SHEET 1 A 4 GLY A 237 VAL A 240 0 SHEET 2 A 4 LYS A 243 LYS A 252 -1 O PHE A 245 N GLN A 238 SHEET 3 A 4 ARG A 349 PHE A 355 -1 O CYS A 353 N LYS A 246 SHEET 4 A 4 GLN A 267 LEU A 268 -1 N GLN A 267 O GLU A 354 SHEET 1 B 3 ALA A 291 LEU A 293 0 SHEET 2 B 3 CYS A 331 ILE A 334 -1 O ILE A 334 N ALA A 291 SHEET 3 B 3 TRP A 340 VAL A 343 -1 O ASN A 341 N GLU A 333 SHEET 1 C 4 GLY B 237 VAL B 240 0 SHEET 2 C 4 LYS B 243 PRO B 253 -1 O PHE B 245 N GLN B 238 SHEET 3 C 4 LYS B 348 PHE B 355 -1 O PHE B 355 N ILE B 244 SHEET 4 C 4 GLN B 267 LEU B 268 -1 N GLN B 267 O GLU B 354 SHEET 1 D 3 ALA B 291 PHE B 292 0 SHEET 2 D 3 CYS B 331 ILE B 334 -1 O ILE B 334 N ALA B 291 SHEET 3 D 3 TRP B 340 VAL B 343 -1 O ASN B 341 N GLU B 333 SHEET 1 E 4 GLY C 237 VAL C 240 0 SHEET 2 E 4 LYS C 243 LYS C 252 -1 O PHE C 245 N GLN C 238 SHEET 3 E 4 ARG C 349 PHE C 355 -1 O CYS C 353 N LYS C 246 SHEET 4 E 4 GLN C 267 LEU C 268 -1 N GLN C 267 O GLU C 354 SHEET 1 F 3 ALA C 291 PHE C 292 0 SHEET 2 F 3 CYS C 331 ILE C 334 -1 O ILE C 334 N ALA C 291 SHEET 3 F 3 TRP C 340 VAL C 343 -1 O VAL C 343 N CYS C 331 SSBOND 1 CYS A 261 CYS A 353 1555 1555 2.03 SSBOND 2 CYS A 331 CYS A 345 1555 1555 2.03 SSBOND 3 CYS B 261 CYS B 353 1555 1555 2.03 SSBOND 4 CYS B 331 CYS B 345 1555 1555 2.03 SSBOND 5 CYS C 261 CYS C 353 1555 1555 2.04 SSBOND 6 CYS C 331 CYS C 345 1555 1555 2.04 LINK O2 MAN D 1 C1 MAN D 2 1555 1555 1.43 LINK O2 MAN E 1 C1 MAN E 2 1555 1555 1.44 LINK O2 MAN F 1 C1 MAN F 2 1555 1555 1.45 CISPEP 1 PHE A 234 PRO A 235 0 -2.83 CISPEP 2 GLU A 321 PRO A 322 0 -0.66 CISPEP 3 PHE B 234 PRO B 235 0 -4.26 CISPEP 4 GLU B 321 PRO B 322 0 -0.76 CISPEP 5 PHE C 234 PRO C 235 0 -2.37 CISPEP 6 GLU C 321 PRO C 322 0 1.23 CRYST1 55.605 108.066 55.595 90.00 91.47 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017984 0.000000 0.000463 0.00000 SCALE2 0.000000 0.009254 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017993 0.00000