PDB Short entry for 3G9W HEADER CELL ADHESION 15-FEB-09 3G9W TITLE CRYSTAL STRUCTURE OF TALIN2 F2-F3 IN COMPLEX WITH THE INTEGRIN BETA1D TITLE 2 CYTOPLASMIC TAIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: TALIN-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: F2-F3 DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INTEGRIN BETA-1D; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: CYTOPLASMIC TAIL; COMPND 10 SYNONYM: FIBRONECTIN RECEPTOR SUBUNIT BETA, INTEGRIN VLA-4 SUBUNIT COMPND 11 BETA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TLN2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: ITGB1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET16B KEYWDS PROTEIN-PROTEIN COMPLEX, PH DOMAIN SUPERFOLD, PTB DOMAIN, HELICAL KEYWDS 2 BUNDLE, INTRINSICALLY UNSTRUCTURED, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR N.J.ANTHIS,K.L.WEGENER,F.YE,C.KIM,E.D.LOWE,I.VAKONAKIS,N.BATE, AUTHOR 2 D.R.CRITCHLEY,M.H.GINSBERG,I.D.CAMPBELL REVDAT 4 01-NOV-23 3G9W 1 REMARK SEQADV REVDAT 3 05-FEB-14 3G9W 1 JRNL REVDAT 2 13-JUL-11 3G9W 1 VERSN REVDAT 1 20-OCT-09 3G9W 0 JRNL AUTH N.J.ANTHIS,K.L.WEGENER,F.YE,C.KIM,B.T.GOULT,E.D.LOWE, JRNL AUTH 2 I.VAKONAKIS,N.BATE,D.R.CRITCHLEY,M.H.GINSBERG,I.D.CAMPBELL JRNL TITL THE STRUCTURE OF AN INTEGRIN/TALIN COMPLEX REVEALS THE BASIS JRNL TITL 2 OF INSIDE-OUT SIGNAL TRANSDUCTION JRNL REF EMBO J. V. 28 3623 2009 JRNL REFN ISSN 0261-4189 JRNL PMID 19798053 JRNL DOI 10.1038/EMBOJ.2009.287 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 41362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9490 - 6.5660 0.95 2568 127 0.1670 0.1490 REMARK 3 2 6.5660 - 5.2150 0.96 2558 148 0.1630 0.2060 REMARK 3 3 5.2150 - 4.5570 0.97 2601 123 0.1520 0.1680 REMARK 3 4 4.5570 - 4.1400 0.97 2551 169 0.1590 0.2130 REMARK 3 5 4.1400 - 3.8440 0.97 2598 136 0.1690 0.1620 REMARK 3 6 3.8440 - 3.6170 0.97 2596 160 0.1740 0.2150 REMARK 3 7 3.6170 - 3.4360 0.98 2621 137 0.1930 0.2210 REMARK 3 8 3.4360 - 3.2870 0.98 2587 123 0.1960 0.2970 REMARK 3 9 3.2870 - 3.1600 0.98 2618 145 0.2010 0.2240 REMARK 3 10 3.1600 - 3.0510 0.98 2643 145 0.2090 0.2430 REMARK 3 11 3.0510 - 2.9560 0.99 2565 159 0.2220 0.2470 REMARK 3 12 2.9560 - 2.8710 0.99 2701 131 0.2250 0.2490 REMARK 3 13 2.8710 - 2.7960 0.99 2598 145 0.2270 0.2450 REMARK 3 14 2.7960 - 2.7280 0.99 2691 136 0.2330 0.3250 REMARK 3 15 2.7280 - 2.6660 0.99 2648 134 0.2320 0.2840 REMARK 3 16 2.6660 - 2.6090 1.00 2678 142 0.2380 0.2830 REMARK 3 17 2.6090 - 2.5570 1.00 2686 124 0.2400 0.3540 REMARK 3 18 2.5570 - 2.5090 1.00 2650 144 0.2390 0.2830 REMARK 3 19 2.5090 - 2.4640 1.00 2665 148 0.2410 0.2800 REMARK 3 20 2.4640 - 2.4220 1.00 2604 132 0.2400 0.2920 REMARK 3 21 2.4220 - 2.3830 1.00 2712 148 0.2410 0.3410 REMARK 3 22 2.3830 - 2.3460 1.00 2690 174 0.2500 0.2710 REMARK 3 23 2.3460 - 2.3120 1.00 2618 121 0.2400 0.3170 REMARK 3 24 2.3120 - 2.2790 1.00 2709 125 0.2430 0.2550 REMARK 3 25 2.2790 - 2.2480 1.00 2698 140 0.2500 0.2980 REMARK 3 26 2.2480 - 2.2190 1.00 2640 105 0.2430 0.3160 REMARK 3 27 2.2190 - 2.1910 1.00 2722 153 0.2480 0.2760 REMARK 3 28 2.1910 - 2.1650 0.97 2547 168 0.2630 0.2790 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 36.25 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.19720 REMARK 3 B22 (A**2) : 2.58870 REMARK 3 B33 (A**2) : -5.18020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4277 REMARK 3 ANGLE : 0.874 5729 REMARK 3 CHIRALITY : 0.063 597 REMARK 3 PLANARITY : 0.004 730 REMARK 3 DIHEDRAL : 16.317 1657 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 27.2091 -3.8933 -22.0990 REMARK 3 T TENSOR REMARK 3 T11: 0.1074 T22: 0.1080 REMARK 3 T33: 0.1143 T12: -0.0043 REMARK 3 T13: 0.0031 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: -0.1339 L22: -0.0152 REMARK 3 L33: 1.1358 L12: -0.1017 REMARK 3 L13: 0.2667 L23: 0.3335 REMARK 3 S TENSOR REMARK 3 S11: -0.0491 S12: -0.0112 S13: 0.0303 REMARK 3 S21: 0.0587 S22: 0.0788 S23: 0.0246 REMARK 3 S31: -0.0486 S32: 0.0097 S33: -0.0152 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 26.9590 7.5175 7.1256 REMARK 3 T TENSOR REMARK 3 T11: 0.1009 T22: 0.1155 REMARK 3 T33: 0.1440 T12: 0.0302 REMARK 3 T13: -0.0122 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 0.0123 L22: 0.4876 REMARK 3 L33: 1.0843 L12: -0.0835 REMARK 3 L13: -0.1563 L23: 0.1370 REMARK 3 S TENSOR REMARK 3 S11: 0.1796 S12: 0.0887 S13: 0.0422 REMARK 3 S21: -0.1610 S22: -0.0637 S23: 0.1473 REMARK 3 S31: -0.0020 S32: -0.0902 S33: -0.1011 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 41.4702 -1.7207 25.5769 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.0900 REMARK 3 T33: 0.1035 T12: -0.0119 REMARK 3 T13: 0.0087 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.3819 L22: -0.3197 REMARK 3 L33: 0.6451 L12: -0.2377 REMARK 3 L13: 0.4421 L23: -0.2080 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.0448 S13: -0.0238 REMARK 3 S21: -0.1101 S22: -0.0922 S23: -0.0010 REMARK 3 S31: 0.1964 S32: -0.0957 S33: -0.0011 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 11.7068 -14.0325 -40.9435 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.1490 REMARK 3 T33: 0.1547 T12: -0.1136 REMARK 3 T13: -0.0318 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: -0.2491 L22: 0.2870 REMARK 3 L33: 0.0190 L12: -0.0979 REMARK 3 L13: -0.1063 L23: -0.1878 REMARK 3 S TENSOR REMARK 3 S11: 0.1198 S12: -0.0053 S13: 0.0500 REMARK 3 S21: 0.1366 S22: -0.1729 S23: 0.1144 REMARK 3 S31: -0.0939 S32: 0.0327 S33: 0.0405 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3G9W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : HORIZONTALLY DIFFRACTING REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : MONOCHROMATOR (HORIZONTALLY SIDE REMARK 200 DIFFRACTING SILICON 111 CRYSTAL) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41362 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.165 REMARK 200 RESOLUTION RANGE LOW (A) : 41.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : 0.11400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.33800 REMARK 200 R SYM FOR SHELL (I) : 0.33800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1MIX, 1MK7, 1MK9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M AMMONIUM ACETATE, 0.02M MAGNESIUM REMARK 280 CHLORIDE, 0.05M HEPES, 5% PEG 8K, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.63000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.92500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.36000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.92500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.63000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.36000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 186 REMARK 465 ILE A 187 REMARK 465 ASP A 188 REMARK 465 PRO A 189 REMARK 465 PHE A 190 REMARK 465 THR A 191 REMARK 465 GLY B 186 REMARK 465 ILE B 187 REMARK 465 ASP B 188 REMARK 465 PRO B 189 REMARK 465 PHE B 190 REMARK 465 THR B 191 REMARK 465 GLY B 192 REMARK 465 ILE B 193 REMARK 465 ASP B 194 REMARK 465 PRO B 195 REMARK 465 PHE B 196 REMARK 465 THR B 197 REMARK 465 LYS B 198 REMARK 465 PHE B 199 REMARK 465 PHE B 200 REMARK 465 TYR B 201 REMARK 465 SER B 202 REMARK 465 ASP B 203 REMARK 465 GLN B 204 REMARK 465 ASN C 789 REMARK 465 PHE C 790 REMARK 465 LYS C 791 REMARK 465 ASN C 792 REMARK 465 PRO C 793 REMARK 465 ASN C 794 REMARK 465 TYR C 795 REMARK 465 GLY C 796 REMARK 465 ARG C 797 REMARK 465 LYS C 798 REMARK 465 ALA C 799 REMARK 465 GLY C 800 REMARK 465 LEU C 801 REMARK 465 PHE D 790 REMARK 465 LYS D 791 REMARK 465 ASN D 792 REMARK 465 PRO D 793 REMARK 465 ASN D 794 REMARK 465 TYR D 795 REMARK 465 GLY D 796 REMARK 465 ARG D 797 REMARK 465 LYS D 798 REMARK 465 ALA D 799 REMARK 465 GLY D 800 REMARK 465 LEU D 801 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 193 160.51 152.05 REMARK 500 THR A 385 146.61 -171.82 REMARK 500 PRO B 259 132.30 -37.92 REMARK 500 THR B 385 146.19 -171.17 REMARK 500 THR C 777 -35.41 -37.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16158 RELATED DB: BMRB REMARK 900 NMR ASSIGNMENTS OF THE BETA1D INTEGRIN TAIL REMARK 900 RELATED ID: 16159 RELATED DB: BMRB REMARK 900 NMR ASSIGNMENTS OF THE BETA1A INTEGRIN TAIL REMARK 900 RELATED ID: 16162 RELATED DB: BMRB REMARK 900 NMR ASSIGNMENTS OF THE BETA1D INTEGRIN TAIL WITH A C-TERMINAL REMARK 900 POLYHISTIDINE TAG REMARK 900 RELATED ID: 15552 RELATED DB: BMRB REMARK 900 NMR ASSIGNMENTS OF THE BETA3 INTEGRIN TAIL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF CHAIN C, D IS ISOFORM BETA-1D REMARK 999 AS LISTED IN UNP ENTRY, P05556-5 DBREF 3G9W A 198 408 UNP Q71LX4 TLN2_MOUSE 198 408 DBREF 3G9W B 198 408 UNP Q71LX4 TLN2_MOUSE 198 408 DBREF 3G9W C 752 801 UNP P05556 ITB1_HUMAN 752 801 DBREF 3G9W D 752 801 UNP P05556 ITB1_HUMAN 752 801 SEQADV 3G9W GLY A 186 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ILE A 187 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ASP A 188 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PRO A 189 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PHE A 190 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W THR A 191 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W GLY A 192 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ILE A 193 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ASP A 194 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PRO A 195 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PHE A 196 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W THR A 197 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W GLY B 186 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ILE B 187 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ASP B 188 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PRO B 189 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PHE B 190 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W THR B 191 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W GLY B 192 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ILE B 193 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W ASP B 194 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PRO B 195 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W PHE B 196 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W THR B 197 UNP Q71LX4 EXPRESSION TAG SEQADV 3G9W GLY C 750 UNP P05556 EXPRESSION TAG SEQADV 3G9W PRO C 751 UNP P05556 EXPRESSION TAG SEQADV 3G9W GLY D 750 UNP P05556 EXPRESSION TAG SEQADV 3G9W PRO D 751 UNP P05556 EXPRESSION TAG SEQRES 1 A 223 GLY ILE ASP PRO PHE THR GLY ILE ASP PRO PHE THR LYS SEQRES 2 A 223 PHE PHE TYR SER ASP GLN ASN VAL ASP SER ARG ASP PRO SEQRES 3 A 223 VAL GLN LEU ASN LEU LEU TYR VAL GLN ALA ARG ASP ASP SEQRES 4 A 223 ILE LEU ASN GLY SER HIS PRO VAL SER PHE GLU LYS ALA SEQRES 5 A 223 CYS GLU PHE GLY GLY PHE GLN ALA GLN ILE GLN PHE GLY SEQRES 6 A 223 PRO HIS VAL GLU HIS LYS HIS LYS PRO GLY PHE LEU ASP SEQRES 7 A 223 LEU LYS GLU PHE LEU PRO LYS GLU TYR ILE LYS GLN ARG SEQRES 8 A 223 GLY ALA GLU LYS ARG ILE PHE GLN GLU HIS LYS ASN CYS SEQRES 9 A 223 GLY GLU MET SER GLU ILE GLU ALA LYS VAL LYS TYR VAL SEQRES 10 A 223 LYS LEU ALA ARG SER LEU ARG THR TYR GLY VAL SER PHE SEQRES 11 A 223 PHE LEU VAL LYS GLU LYS MET LYS GLY LYS ASN LYS LEU SEQRES 12 A 223 VAL PRO ARG LEU LEU GLY ILE THR LYS ASP SER VAL MET SEQRES 13 A 223 ARG VAL ASP GLU LYS THR LYS GLU VAL LEU GLN GLU TRP SEQRES 14 A 223 PRO LEU THR THR VAL LYS ARG TRP ALA ALA SER PRO LYS SEQRES 15 A 223 SER PHE THR LEU ASP PHE GLY GLU TYR GLN GLU SER TYR SEQRES 16 A 223 TYR SER VAL GLN THR THR GLU GLY GLU GLN ILE SER GLN SEQRES 17 A 223 LEU ILE ALA GLY TYR ILE ASP ILE ILE LEU LYS LYS LYS SEQRES 18 A 223 GLN SER SEQRES 1 B 223 GLY ILE ASP PRO PHE THR GLY ILE ASP PRO PHE THR LYS SEQRES 2 B 223 PHE PHE TYR SER ASP GLN ASN VAL ASP SER ARG ASP PRO SEQRES 3 B 223 VAL GLN LEU ASN LEU LEU TYR VAL GLN ALA ARG ASP ASP SEQRES 4 B 223 ILE LEU ASN GLY SER HIS PRO VAL SER PHE GLU LYS ALA SEQRES 5 B 223 CYS GLU PHE GLY GLY PHE GLN ALA GLN ILE GLN PHE GLY SEQRES 6 B 223 PRO HIS VAL GLU HIS LYS HIS LYS PRO GLY PHE LEU ASP SEQRES 7 B 223 LEU LYS GLU PHE LEU PRO LYS GLU TYR ILE LYS GLN ARG SEQRES 8 B 223 GLY ALA GLU LYS ARG ILE PHE GLN GLU HIS LYS ASN CYS SEQRES 9 B 223 GLY GLU MET SER GLU ILE GLU ALA LYS VAL LYS TYR VAL SEQRES 10 B 223 LYS LEU ALA ARG SER LEU ARG THR TYR GLY VAL SER PHE SEQRES 11 B 223 PHE LEU VAL LYS GLU LYS MET LYS GLY LYS ASN LYS LEU SEQRES 12 B 223 VAL PRO ARG LEU LEU GLY ILE THR LYS ASP SER VAL MET SEQRES 13 B 223 ARG VAL ASP GLU LYS THR LYS GLU VAL LEU GLN GLU TRP SEQRES 14 B 223 PRO LEU THR THR VAL LYS ARG TRP ALA ALA SER PRO LYS SEQRES 15 B 223 SER PHE THR LEU ASP PHE GLY GLU TYR GLN GLU SER TYR SEQRES 16 B 223 TYR SER VAL GLN THR THR GLU GLY GLU GLN ILE SER GLN SEQRES 17 B 223 LEU ILE ALA GLY TYR ILE ASP ILE ILE LEU LYS LYS LYS SEQRES 18 B 223 GLN SER SEQRES 1 C 52 GLY PRO LYS LEU LEU MET ILE ILE HIS ASP ARG ARG GLU SEQRES 2 C 52 PHE ALA LYS PHE GLU LYS GLU LYS MET ASN ALA LYS TRP SEQRES 3 C 52 ASP THR GLN GLU ASN PRO ILE TYR LYS SER PRO ILE ASN SEQRES 4 C 52 ASN PHE LYS ASN PRO ASN TYR GLY ARG LYS ALA GLY LEU SEQRES 1 D 52 GLY PRO LYS LEU LEU MET ILE ILE HIS ASP ARG ARG GLU SEQRES 2 D 52 PHE ALA LYS PHE GLU LYS GLU LYS MET ASN ALA LYS TRP SEQRES 3 D 52 ASP THR GLN GLU ASN PRO ILE TYR LYS SER PRO ILE ASN SEQRES 4 D 52 ASN PHE LYS ASN PRO ASN TYR GLY ARG LYS ALA GLY LEU HET GOL A 1 6 HET GOL A 409 6 HET PEG A 410 7 HET GOL B 1 6 HET GOL B 409 6 HET PEG B 410 7 HET GOL B 411 6 HET GOL C 1 6 HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 6(C3 H8 O3) FORMUL 7 PEG 2(C4 H10 O3) FORMUL 13 HOH *381(H2 O) HELIX 1 1 ASP A 194 LYS A 198 5 5 HELIX 2 2 ASP A 210 ASN A 227 1 18 HELIX 3 3 SER A 233 GLY A 250 1 18 HELIX 4 4 ASP A 263 PHE A 267 5 5 HELIX 5 5 PRO A 269 ILE A 273 5 5 HELIX 6 6 GLY A 277 CYS A 289 1 13 HELIX 7 7 SER A 293 LEU A 308 1 16 HELIX 8 8 THR A 357 VAL A 359 5 3 HELIX 9 9 PHE A 373 GLN A 377 5 5 HELIX 10 10 GLU A 387 SER A 408 1 22 HELIX 11 11 ASP B 210 ASN B 227 1 18 HELIX 12 12 SER B 233 GLY B 250 1 18 HELIX 13 13 ASP B 263 PHE B 267 5 5 HELIX 14 14 PRO B 269 ILE B 273 5 5 HELIX 15 15 GLY B 277 CYS B 289 1 13 HELIX 16 16 SER B 293 LEU B 308 1 16 HELIX 17 17 THR B 357 VAL B 359 5 3 HELIX 18 18 PHE B 373 GLN B 377 5 5 HELIX 19 19 GLU B 387 GLN B 407 1 21 HELIX 20 20 GLY C 750 LYS C 770 1 21 HELIX 21 21 MET C 771 ALA C 773 5 3 HELIX 22 22 GLY D 750 LYS D 770 1 21 HELIX 23 23 MET D 771 ALA D 773 5 3 HELIX 24 24 SER D 785 ASN D 789 5 5 SHEET 1 A 4 SER A 314 LYS A 321 0 SHEET 2 A 4 LEU A 328 ILE A 335 -1 O LEU A 333 N PHE A 316 SHEET 3 A 4 SER A 339 VAL A 343 -1 O VAL A 343 N LEU A 332 SHEET 4 A 4 VAL A 350 PRO A 355 -1 O TRP A 354 N VAL A 340 SHEET 1 B 4 TYR A 381 GLN A 384 0 SHEET 2 B 4 SER A 368 ASP A 372 -1 N LEU A 371 O TYR A 381 SHEET 3 B 4 ARG A 361 SER A 365 -1 N ARG A 361 O ASP A 372 SHEET 4 B 4 LYS D 774 TRP D 775 -1 O LYS D 774 N ALA A 364 SHEET 1 C 4 SER B 314 LYS B 321 0 SHEET 2 C 4 LEU B 328 ILE B 335 -1 O ARG B 331 N VAL B 318 SHEET 3 C 4 SER B 339 VAL B 343 -1 O VAL B 343 N LEU B 332 SHEET 4 C 4 VAL B 350 PRO B 355 -1 O TRP B 354 N VAL B 340 SHEET 1 D 4 TYR B 381 GLN B 384 0 SHEET 2 D 4 SER B 368 ASP B 372 -1 N LEU B 371 O TYR B 381 SHEET 3 D 4 ARG B 361 ALA B 364 -1 N ARG B 361 O ASP B 372 SHEET 4 D 4 LYS C 774 TRP C 775 -1 O LYS C 774 N ALA B 364 SITE 1 AC1 5 GLY A 228 HOH A 559 HOH A 603 HOH A 605 SITE 2 AC1 5 HOH B 509 SITE 1 AC2 10 ASP A 224 SER A 229 HIS A 230 GLY A 312 SITE 2 AC2 10 VAL A 313 SER A 314 HOH A 657 HOH A 663 SITE 3 AC2 10 HOH A 665 ILE C 757 SITE 1 AC3 6 ARG A 342 GLN A 352 GLN A 377 TYR A 380 SITE 2 AC3 6 HOH A 565 HOH A 695 SITE 1 AC4 8 GLY B 228 SER B 229 PHE B 315 HOH B 491 SITE 2 AC4 8 HOH B 496 HOH B 528 HOH B 578 HOH B 581 SITE 1 AC5 5 GLU A 387 LYS B 321 GLY B 324 LYS B 325 SITE 2 AC5 5 ASN B 326 SITE 1 AC6 8 GLU B 320 LYS B 321 ARG B 342 GLN B 352 SITE 2 AC6 8 GLN B 377 HOH B 681 HOH B 692 HOH B 699 SITE 1 AC7 8 ASP B 224 SER B 229 HIS B 230 GLY B 312 SITE 2 AC7 8 VAL B 313 HOH B 430 HOH B 659 ILE D 757 SITE 1 AC8 4 LYS C 770 MET C 771 ALA C 773 TRP C 775 CRYST1 53.260 108.720 131.850 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018776 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007584 0.00000