PDB Short entry for 3GHM HEADER HYDROLASE 04-MAR-09 3GHM TITLE CRYSTAL STRUCTURE OF THE EXOSITE-CONTAINING FRAGMENT OF HUMAN ADAMTS13 TITLE 2 (FORM-1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: A DISINTEGRIN AND METALLOPROTEINASE WITH THROMBOSPONDIN COMPND 3 MOTIFS 13; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: DTCS DOMAINS; COMPND 6 SYNONYM: ADAMTS-13, ADAM-TS 13, ADAM-TS13, VON WILLEBRAND FACTOR- COMPND 7 CLEAVING PROTEASE, VWF-CLEAVING PROTEASE, VWF-CP; COMPND 8 EC: 3.4.24.-; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADAMTS13; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: LEC 2.3.8.1; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: CHO CELLS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PCM-NIDSP KEYWDS THROMBOSPONDIN TYPE-1 MOTIF, BETA SANDWICH, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.AKIYAMA,S.TAKEDA,K.KOKAME,J.TAKAGI,T.MIYATA REVDAT 4 10-NOV-21 3GHM 1 SEQADV HETSYN REVDAT 3 29-JUL-20 3GHM 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 13-JUL-11 3GHM 1 VERSN REVDAT 1 27-OCT-09 3GHM 0 JRNL AUTH M.AKIYAMA,S.TAKEDA,K.KOKAME,J.TAKAGI,T.MIYATA JRNL TITL CRYSTAL STRUCTURES OF THE NON-CATALYTIC DOMAINS OF ADAMTS13 JRNL TITL 2 REVEAL MULTIPLE DISCONTINUOUS EXOSITES FOR VON WILLEBRAND JRNL TITL 3 FACTOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.AKIYAMA,S.TAKEDA,K.KOKAME,J.TAKAGI,T.MIYATA REMARK 1 TITL PRODUCTION, CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 2 ANALYSIS OF AN EXOSITE-CONTAINING FRAGMENT OF HUMAN VON REMARK 1 TITL 3 WILLEBRAND FACTOR-CLEAVING PROTEINASE ADAMTS13 REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 739 2009 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19574655 REMARK 1 DOI 10.1107/S1744309109023410 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1305430.790 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 16844 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 857 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2131 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE : 0.4010 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 108 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2848 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.10000 REMARK 3 B22 (A**2) : 3.60000 REMARK 3 B33 (A**2) : -7.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -24.55000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.42 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.50 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.50 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 BOND ANGLES (DEGREES) : 1.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.750 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 81.86 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3GHM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16867 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.17600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG1500, 100MM MES/NAOH, 8% REMARK 280 PENTAERYTHRITOL, PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.33350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.45700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.33350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.45700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 285 REMARK 465 ARG A 286 REMARK 465 ARG A 287 REMARK 465 PRO A 288 REMARK 465 GLN A 289 REMARK 465 PRO A 290 REMARK 465 GLY A 291 REMARK 465 SER A 292 REMARK 465 ALA A 293 REMARK 465 GLY A 294 REMARK 465 HIS A 295 REMARK 465 PRO A 296 REMARK 465 PRO A 297 REMARK 465 ASP A 298 REMARK 465 THR A 323 REMARK 465 PHE A 324 REMARK 465 ALA A 325 REMARK 465 ARG A 326 REMARK 465 GLU A 327 REMARK 465 HIS A 328 REMARK 465 LEU A 329 REMARK 465 ASP A 330 REMARK 465 ARG A 459 REMARK 465 SER A 460 REMARK 465 SER A 461 REMARK 465 PRO A 462 REMARK 465 GLY A 463 REMARK 465 GLY A 464 REMARK 465 ALA A 465 REMARK 465 ARG A 683 REMARK 465 GLN A 684 REMARK 465 ALA A 685 REMARK 465 SER A 686 REMARK 465 ARG A 687 REMARK 465 LEU A 688 REMARK 465 GLU A 689 REMARK 465 ASN A 690 REMARK 465 LEU A 691 REMARK 465 TYR A 692 REMARK 465 PHE A 693 REMARK 465 GLN A 694 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 300 105.85 -59.49 REMARK 500 PRO A 301 -36.51 -38.61 REMARK 500 LYS A 318 49.63 -83.13 REMARK 500 ALA A 321 -167.74 -78.60 REMARK 500 GLN A 333 -80.32 -56.79 REMARK 500 LEU A 350 107.81 -162.36 REMARK 500 LEU A 351 97.87 -57.71 REMARK 500 VAL A 352 133.65 -177.34 REMARK 500 VAL A 362 108.70 -57.88 REMARK 500 ALA A 422 160.12 -49.99 REMARK 500 ARG A 452 -9.70 -53.53 REMARK 500 ASP A 537 19.35 52.51 REMARK 500 GLN A 539 1.35 55.34 REMARK 500 ASN A 552 17.34 54.68 REMARK 500 THR A 563 22.52 -140.39 REMARK 500 ALA A 564 -147.78 -108.01 REMARK 500 LEU A 574 125.27 -171.31 REMARK 500 ALA A 606 -143.58 54.75 REMARK 500 THR A 633 -159.03 -98.35 REMARK 500 ARG A 636 37.97 -76.06 REMARK 500 LEU A 668 1.19 -60.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GHN RELATED DB: PDB DBREF 3GHM A 287 685 UNP Q76LX8 ATS13_HUMAN 287 685 SEQADV 3GHM GLY A 285 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM ARG A 286 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM LEU A 524 UNP Q76LX8 SER 524 ENGINEERED MUTATION SEQADV 3GHM SER A 686 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM ARG A 687 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM LEU A 688 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM GLU A 689 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM ASN A 690 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM LEU A 691 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM TYR A 692 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM PHE A 693 UNP Q76LX8 EXPRESSION TAG SEQADV 3GHM GLN A 694 UNP Q76LX8 EXPRESSION TAG SEQRES 1 A 410 GLY ARG ARG PRO GLN PRO GLY SER ALA GLY HIS PRO PRO SEQRES 2 A 410 ASP ALA GLN PRO GLY LEU TYR TYR SER ALA ASN GLU GLN SEQRES 3 A 410 CYS ARG VAL ALA PHE GLY PRO LYS ALA VAL ALA CYS THR SEQRES 4 A 410 PHE ALA ARG GLU HIS LEU ASP MET CYS GLN ALA LEU SER SEQRES 5 A 410 CYS HIS THR ASP PRO LEU ASP GLN SER SER CYS SER ARG SEQRES 6 A 410 LEU LEU VAL PRO LEU LEU ASP GLY THR GLU CYS GLY VAL SEQRES 7 A 410 GLU LYS TRP CYS SER LYS GLY ARG CYS ARG SER LEU VAL SEQRES 8 A 410 GLU LEU THR PRO ILE ALA ALA VAL HIS GLY ARG TRP SER SEQRES 9 A 410 SER TRP GLY PRO ARG SER PRO CYS SER ARG SER CYS GLY SEQRES 10 A 410 GLY GLY VAL VAL THR ARG ARG ARG GLN CYS ASN ASN PRO SEQRES 11 A 410 ARG PRO ALA PHE GLY GLY ARG ALA CYS VAL GLY ALA ASP SEQRES 12 A 410 LEU GLN ALA GLU MET CYS ASN THR GLN ALA CYS GLU LYS SEQRES 13 A 410 THR GLN LEU GLU PHE MET SER GLN GLN CYS ALA ARG THR SEQRES 14 A 410 ASP GLY GLN PRO LEU ARG SER SER PRO GLY GLY ALA SER SEQRES 15 A 410 PHE TYR HIS TRP GLY ALA ALA VAL PRO HIS SER GLN GLY SEQRES 16 A 410 ASP ALA LEU CYS ARG HIS MET CYS ARG ALA ILE GLY GLU SEQRES 17 A 410 SER PHE ILE MET LYS ARG GLY ASP SER PHE LEU ASP GLY SEQRES 18 A 410 THR ARG CYS MET PRO SER GLY PRO ARG GLU ASP GLY THR SEQRES 19 A 410 LEU SER LEU CYS VAL LEU GLY SER CYS ARG THR PHE GLY SEQRES 20 A 410 CYS ASP GLY ARG MET ASP SER GLN GLN VAL TRP ASP ARG SEQRES 21 A 410 CYS GLN VAL CYS GLY GLY ASP ASN SER THR CYS SER PRO SEQRES 22 A 410 ARG LYS GLY SER PHE THR ALA GLY ARG ALA ARG GLU TYR SEQRES 23 A 410 VAL THR PHE LEU THR VAL THR PRO ASN LEU THR SER VAL SEQRES 24 A 410 TYR ILE ALA ASN HIS ARG PRO LEU PHE THR HIS LEU ALA SEQRES 25 A 410 VAL ARG ILE GLY GLY ARG TYR VAL VAL ALA GLY LYS MET SEQRES 26 A 410 SER ILE SER PRO ASN THR THR TYR PRO SER LEU LEU GLU SEQRES 27 A 410 ASP GLY ARG VAL GLU TYR ARG VAL ALA LEU THR GLU ASP SEQRES 28 A 410 ARG LEU PRO ARG LEU GLU GLU ILE ARG ILE TRP GLY PRO SEQRES 29 A 410 LEU GLN GLU ASP ALA ASP ILE GLN VAL TYR ARG ARG TYR SEQRES 30 A 410 GLY GLU GLU TYR GLY ASN LEU THR ARG PRO ASP ILE THR SEQRES 31 A 410 PHE THR TYR PHE GLN PRO LYS PRO ARG GLN ALA SER ARG SEQRES 32 A 410 LEU GLU ASN LEU TYR PHE GLN MODRES 3GHM ASN A 552 ASN GLYCOSYLATION SITE MODRES 3GHM ASN A 614 ASN GLYCOSYLATION SITE MODRES 3GHM SER A 399 SER GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET FUC C 1 10 HET BGC C 2 11 HET NAG A 900 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 3 FUC C6 H12 O5 FORMUL 3 BGC C6 H12 O6 FORMUL 5 HOH *29(H2 O) HELIX 1 1 GLN A 300 TYR A 304 5 5 HELIX 2 2 SER A 306 PHE A 315 1 10 HELIX 3 3 LEU A 374 THR A 378 1 5 HELIX 4 4 THR A 441 ARG A 452 1 12 HELIX 5 5 GLN A 478 ARG A 484 1 7 HELIX 6 6 GLY A 662 GLY A 666 5 5 SHEET 1 A 2 VAL A 320 ALA A 321 0 SHEET 2 A 2 CYS A 337 HIS A 338 -1 O HIS A 338 N VAL A 320 SHEET 1 B 3 GLU A 359 GLY A 361 0 SHEET 2 B 3 LYS A 364 SER A 367 -1 O LYS A 364 N GLY A 361 SHEET 3 B 3 ARG A 370 SER A 373 -1 O ARG A 370 N SER A 367 SHEET 1 C 2 GLY A 403 THR A 406 0 SHEET 2 C 2 ALA A 430 CYS A 433 -1 O CYS A 433 N GLY A 403 SHEET 1 D 3 TRP A 470 ALA A 472 0 SHEET 2 D 3 MET A 486 ALA A 489 -1 O ARG A 488 N GLY A 471 SHEET 3 D 3 ILE A 495 LYS A 497 -1 O MET A 496 N CYS A 487 SHEET 1 E 2 LEU A 519 VAL A 523 0 SHEET 2 E 2 SER A 526 PHE A 530 -1 O SER A 526 N VAL A 523 SHEET 1 F 6 CYS A 555 PHE A 562 0 SHEET 2 F 6 ILE A 673 PRO A 680 -1 O PHE A 675 N GLY A 560 SHEET 3 F 6 THR A 581 ASN A 587 -1 N TYR A 584 O THR A 676 SHEET 4 F 6 PRO A 638 TRP A 646 -1 O ILE A 643 N ILE A 585 SHEET 5 F 6 ARG A 625 LEU A 632 -1 N GLU A 627 O ARG A 644 SHEET 6 F 6 THR A 615 TYR A 617 -1 N TYR A 617 O VAL A 626 SHEET 1 G 4 GLU A 569 VAL A 576 0 SHEET 2 G 4 ALA A 653 ARG A 659 -1 O ILE A 655 N LEU A 574 SHEET 3 G 4 THR A 593 ILE A 599 -1 N ARG A 598 O ASP A 654 SHEET 4 G 4 ARG A 602 VAL A 605 -1 O VAL A 604 N VAL A 597 SSBOND 1 CYS A 311 CYS A 337 1555 1555 2.03 SSBOND 2 CYS A 322 CYS A 347 1555 1555 2.03 SSBOND 3 CYS A 332 CYS A 366 1555 1555 2.03 SSBOND 4 CYS A 360 CYS A 371 1555 1555 2.03 SSBOND 5 CYS A 396 CYS A 433 1555 1555 2.03 SSBOND 6 CYS A 400 CYS A 438 1555 1555 2.04 SSBOND 7 CYS A 411 CYS A 423 1555 1555 2.03 SSBOND 8 CYS A 450 CYS A 487 1555 1555 2.04 SSBOND 9 CYS A 483 CYS A 522 1555 1555 2.03 SSBOND 10 CYS A 508 CYS A 527 1555 1555 2.03 SSBOND 11 CYS A 532 CYS A 548 1555 1555 2.02 SSBOND 12 CYS A 545 CYS A 555 1555 1555 2.03 LINK OG SER A 399 C1 FUC C 1 1555 1555 1.39 LINK ND2 ASN A 552 C1 NAG A 900 1555 1555 1.45 LINK ND2 ASN A 614 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.39 LINK O3 FUC C 1 C1 BGC C 2 1555 1555 1.40 CISPEP 1 THR A 378 PRO A 379 0 0.07 CISPEP 2 ASN A 413 PRO A 414 0 0.06 CISPEP 3 VAL A 474 PRO A 475 0 0.07 CISPEP 4 TYR A 617 PRO A 618 0 -0.22 CRYST1 152.667 52.914 76.218 90.00 111.35 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006550 0.000000 0.002560 0.00000 SCALE2 0.000000 0.018899 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014087 0.00000